Feature identity
- Identifier
- PaHa03g37580.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,068 bp
- Genomic location
- 3:92,141,663–92,147,019
- Strand
- −
Hass · mRNA
PaHa03g37580.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,068
- bp
- 3:92,141,663–92,147,019
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g37580
- eggNOG
- Preferred name: MDHG | Seed ortholog: 337451.A0A443NH98 | COG: S | eggNOG OG: Ldh_1_C@131567|C-2, Ldh_1_C@33090|vT-21, Ldh_1_C@3398|BTN-27, Ldh_1_N@131567|BL-9, Ldh_1_N@1437183|Csg-32, Ldh_1_N@33090|xq-23, Ldh_1_N@3398|BaT-29
- Gene Ontology
- GO:0000325 plant-type vacuole; GO:0005737 cytoplasm; GO:0005777 peroxisome; GO:0005886 plasma membrane; GO:0009507 chloroplast; GO:0009941 chloroplast envelope; GO:0016615 malate dehydrogenase activity; GO:0031998 regulation of fatty acid beta-oxidation; GO:0042579 microbody; GO:0048046 apoplast; GO:0080093 regulation of photorespiration
- KEGG
- EC: ec:1.1.1.37 | KO: K00026 | Pathway: 00020, 00270, 00620, 00630, 00710, 01100, 01110, 01200 | Module: M00009, M00011, M00012, M00168, M00171 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g37580.1-protein
derives_frommRNAPaHa03g37580.1
mRNAPaHa03g37580.1
part_ofgenePaHa03g37580
CDS
part_ofPaHa03g37580.1-CDS-3-1787993825:92141663..92141732mRNAPaHa03g37580.1
CDS
part_ofPaHa03g37580.1-CDS-3-1787993825:92142565..92142659mRNAPaHa03g37580.1
CDS
part_ofPaHa03g37580.1-CDS-3-1787993825:92142765..92142854mRNAPaHa03g37580.1
CDS
part_ofPaHa03g37580.1-CDS-3-1787993825:92142960..92142995mRNAPaHa03g37580.1
CDS
part_ofPaHa03g37580.1-CDS-3-1787993825:92143600..92143683mRNAPaHa03g37580.1
CDS
part_ofPaHa03g37580.1-CDS-3-1787993825:92143794..92143883mRNAPaHa03g37580.1
CDS
part_ofPaHa03g37580.1-CDS-3-1787993825:92144172..92144486mRNAPaHa03g37580.1
CDS
part_ofPaHa03g37580.1-CDS-3-1787993825:92145790..92146005mRNAPaHa03g37580.1
CDS
part_ofPaHa03g37580.1-CDS-3-1787993825:92146948..92147019mRNAPaHa03g37580.1
exon
part_ofPaHa03g37580.1-exon-3-1787993825:92141663..92141732mRNAPaHa03g37580.1
exon
part_ofPaHa03g37580.1-exon-3-1787993825:92142565..92142659mRNAPaHa03g37580.1
exon
part_ofPaHa03g37580.1-exon-3-1787993825:92142765..92142854mRNAPaHa03g37580.1
exon
part_ofPaHa03g37580.1-exon-3-1787993825:92142960..92142995mRNAPaHa03g37580.1
exon
part_ofPaHa03g37580.1-exon-3-1787993825:92143600..92143683mRNAPaHa03g37580.1
exon
part_ofPaHa03g37580.1-exon-3-1787993825:92143794..92143883mRNAPaHa03g37580.1
exon
part_ofPaHa03g37580.1-exon-3-1787993825:92144172..92144486mRNAPaHa03g37580.1
exon
part_ofPaHa03g37580.1-exon-3-1787993825:92145790..92146005mRNAPaHa03g37580.1
exon
part_ofPaHa03g37580.1-exon-3-1787993825:92146948..92147019mRNAPaHa03g37580.1
