Feature identity
- Identifier
- PaHa01g11900.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,611 bp
- Genomic location
- 1:17,338,932–17,344,573
- Strand
- +
Hass · mRNA
PaHa01g11900.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,611
- bp
- 1:17,338,932–17,344,573
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g11900
- eggNOG
- Preferred name: LOC104604518 | Seed ortholog: 337451.A0A3S3N254 | COG: S | eggNOG OG: AMP-binding_C@131567|Drk-31, AMP-binding_C@3193|TGn-46, AMP-binding_C@3398|bMp-50, AMP-binding_C@35493|Ock-43, AMP-binding|D2ZKXV@131567, AMP-binding|D2ZKXV@3398, AMP-binding|D2ZKXV@58023
- Gene Ontology
- GO:0004321 fatty-acyl-CoA synthase activity; GO:0005739 mitochondrion; GO:0005777 peroxisome; GO:0009695 jasmonic acid biosynthetic process; GO:0016207 4-coumarate-CoA ligase activity
- KEGG
- EC: ec:6.2.1.12 | KO: K01904 | Pathway: 00130, 00940, 01100, 01110 | Module: M00039, M00137 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g11900.1-protein
derives_frommRNAPaHa01g11900.1
mRNAPaHa01g11900.1
part_ofgenePaHa01g11900
CDS
part_ofPaHa01g11900.1-CDS-1-1787993825:17338932..17339921mRNAPaHa01g11900.1
CDS
part_ofPaHa01g11900.1-CDS-1-1787993825:17340274..17340463mRNAPaHa01g11900.1
CDS
part_ofPaHa01g11900.1-CDS-1-1787993825:17342056..17342201mRNAPaHa01g11900.1
CDS
part_ofPaHa01g11900.1-CDS-1-1787993825:17343559..17343626mRNAPaHa01g11900.1
CDS
part_ofPaHa01g11900.1-CDS-1-1787993825:17343743..17343845mRNAPaHa01g11900.1
CDS
part_ofPaHa01g11900.1-CDS-1-1787993825:17344460..17344573mRNAPaHa01g11900.1
exon
part_ofPaHa01g11900.1-exon-1-1787993825:17338932..17339921mRNAPaHa01g11900.1
exon
part_ofPaHa01g11900.1-exon-1-1787993825:17340274..17340463mRNAPaHa01g11900.1
exon
part_ofPaHa01g11900.1-exon-1-1787993825:17342056..17342201mRNAPaHa01g11900.1
exon
part_ofPaHa01g11900.1-exon-1-1787993825:17343559..17343626mRNAPaHa01g11900.1
exon
part_ofPaHa01g11900.1-exon-1-1787993825:17343743..17343845mRNAPaHa01g11900.1
exon
part_ofPaHa01g11900.1-exon-1-1787993825:17344460..17344573mRNAPaHa01g11900.1
