Hass · gene

PaHa_c422g00190

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

753
bp
unplaced_contig_422:21,263–22,117
genomic location
Record overview

Feature identity

Identifier
PaHa_c422g00190
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
753 bp
Genomic location
unplaced_contig_422:21,263–22,117
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: ARF | Seed ortholog: 765868.A0A178AP93 | COG: S | eggNOG OG: Arf@131567|AQ-7, Arf@2759|Cbv-28
Gene Ontology
GO:0000139 Golgi membrane; GO:0002090 regulation of receptor internalization; GO:0003924 GTPase activity; GO:0005575 cellular_component; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005765 lysosomal membrane; GO:0005770 late endosome; GO:0005778 peroxisomal membrane; GO:0005783 endoplasmic reticulum; GO:0005794 Golgi apparatus; GO:0005802 trans-Golgi network; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0005925 focal adhesion; GO:0006878 intracellular copper ion homeostasis; GO:0006886 intracellular protein transport; GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport; GO:0006893 Golgi to plasma membrane transport; GO:0007005 mitochondrion organization; GO:0007015 actin filament organization; GO:0007264 small GTPase-mediated signal transduction; GO:0007276 gamete generation; GO:0008150 biological_process; GO:0009792 embryo development ending in birth or egg hatching; GO:0010636 positive regulation of mitochondrial fusion; GO:0012505 endomembrane system; GO:0014069 postsynaptic density; GO:0015031 protein transport; GO:0016192 vesicle-mediated transport; GO:0016236 macroautophagy; GO:0019217 regulation of fatty acid metabolic process; GO:0030017 sarcomere; GO:0030137 COPI-coated vesicle; GO:0030447 filamentous growth; GO:0030968 endoplasmic reticulum unfolded protein response; GO:0031252 cell leading edge; GO:0031981 nuclear lumen; GO:0032991 protein-containing complex; GO:0034315 regulation of Arp2/3 complex-mediated actin nucleation; GO:0034379 very-low-density lipoprotein particle assembly; GO:0034614 cellular response to reactive oxygen species; GO:0036498 IRE1-mediated unfolded protein response; GO:0044232 organelle membrane contact site; GO:0045807 positive regulation of endocytosis; GO:0045956 positive regulation of calcium ion-dependent exocytosis; GO:0046836 glycolipid transport; GO:0048193 Golgi vesicle transport; GO:0048259 regulation of receptor-mediated endocytosis; GO:0048599 oocyte development; GO:0050714 positive regulation of protein secretion; GO:0060292 long-term synaptic depression; GO:0060872 semicircular canal development; GO:0060999 positive regulation of dendritic spine development; GO:0062040 fungal biofilm matrix; GO:0070062 extracellular exosome; GO:0070142 synaptic vesicle budding; GO:0071466 cellular response to xenobiotic stimulus; GO:0090141 positive regulation of mitochondrial fission; GO:0097014 ciliary plasm; GO:0097061 dendritic spine organization; GO:0097212 lysosomal membrane organization; GO:0098586 cellular response to virus; GO:0098974 postsynaptic actin cytoskeleton organization; GO:0098978 glutamatergic synapse; GO:0160281 cytoplasmic side of trans-Golgi network membrane; GO:1902307 positive regulation of sodium ion transmembrane transport; GO:1902824 positive regulation of late endosome to lysosome transport; GO:1902953 positive regulation of ER to Golgi vesicle-mediated transport; GO:1903292 protein localization to Golgi membrane; GO:1903358 regulation of Golgi organization; GO:1903725 regulation of phospholipid metabolic process; GO:1904748 regulation of apoptotic process involved in development; GO:1990386 mitotic cleavage furrow ingression
KEGG
KO: K07937 | Pathway: 04144 | BRITE: 00001, 04031, 04131, 04147
Biological context

Connected feature records

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