Feature identity
- Identifier
- PaHa03g35310.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 993 bp
- Genomic location
- 3:88,003,438–88,009,392
- Strand
- −
Hass · mRNA
PaHa03g35310.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 993
- bp
- 3:88,003,438–88,009,392
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g35310
- eggNOG
- Preferred name: LOC104597375 | Seed ortholog: 337451.A0A443NWD6 | COG: S | eggNOG OG: Methyltransf_11@131567|AjK-27, Methyltransf_11@1437183|zKE-65, Methyltransf_11@2759|MEt-38, Methyltransf_11@3398|uQH-58, Sterol_MT_C@131567|A-1, Sterol_MT_C@3398|HP-15
- Gene Ontology
- GO:0003838 sterol 24-C-methyltransferase activity; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005741 mitochondrial outer membrane; GO:0005783 endoplasmic reticulum; GO:0005794 Golgi apparatus; GO:0005811 lipid droplet; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006696 ergosterol biosynthetic process; GO:0006972 hyperosmotic response; GO:0007389 pattern specification process; GO:0008757 S-adenosylmethionine-dependent methyltransferase activity; GO:0009617 response to bacterium; GO:0009825 multidimensional cell growth; GO:0010051 xylem and phloem pattern formation; GO:0016126 sterol biosynthetic process; GO:0032876 negative regulation of DNA endoreduplication; GO:0036196 zymosterol metabolic process; GO:0042802 identical protein binding; GO:0044858 plasma membrane raft polarization; GO:0045335 phagocytic vesicle; GO:0071466 cellular response to xenobiotic stimulus; GO:0090378 seed trichome elongation
- KEGG
- EC: ec:2.1.1.41 | KO: K00559 | Pathway: 00100, 01100, 01110 | Module: M00102, M00917 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g35310.1-protein
derives_frommRNAPaHa03g35310.1
mRNAPaHa03g35310.1
part_ofgenePaHa03g35310
CDS
part_ofPaHa03g35310.1-CDS-3-1787993825:88003438..88003531mRNAPaHa03g35310.1
CDS
part_ofPaHa03g35310.1-CDS-3-1787993825:88004794..88004891mRNAPaHa03g35310.1
CDS
part_ofPaHa03g35310.1-CDS-3-1787993825:88005022..88005147mRNAPaHa03g35310.1
CDS
part_ofPaHa03g35310.1-CDS-3-1787993825:88005245..88005328mRNAPaHa03g35310.1
CDS
part_ofPaHa03g35310.1-CDS-3-1787993825:88005908..88006024mRNAPaHa03g35310.1
CDS
part_ofPaHa03g35310.1-CDS-3-1787993825:88006134..88006217mRNAPaHa03g35310.1
CDS
part_ofPaHa03g35310.1-CDS-3-1787993825:88006382..88006458mRNAPaHa03g35310.1
CDS
part_ofPaHa03g35310.1-CDS-3-1787993825:88007024..88007079mRNAPaHa03g35310.1
CDS
part_ofPaHa03g35310.1-CDS-3-1787993825:88007475..88007587mRNAPaHa03g35310.1
CDS
part_ofPaHa03g35310.1-CDS-3-1787993825:88008271..88008331mRNAPaHa03g35310.1
CDS
part_ofPaHa03g35310.1-CDS-3-1787993825:88009310..88009392mRNAPaHa03g35310.1
exon
part_ofPaHa03g35310.1-exon-3-1787993825:88003438..88003531mRNAPaHa03g35310.1
exon
part_ofPaHa03g35310.1-exon-3-1787993825:88004794..88004891mRNAPaHa03g35310.1
exon
part_ofPaHa03g35310.1-exon-3-1787993825:88005022..88005147mRNAPaHa03g35310.1
exon
part_ofPaHa03g35310.1-exon-3-1787993825:88005245..88005328mRNAPaHa03g35310.1
exon
part_ofPaHa03g35310.1-exon-3-1787993825:88005908..88006024mRNAPaHa03g35310.1
exon
part_ofPaHa03g35310.1-exon-3-1787993825:88006134..88006217mRNAPaHa03g35310.1
exon
part_ofPaHa03g35310.1-exon-3-1787993825:88006382..88006458mRNAPaHa03g35310.1
exon
part_ofPaHa03g35310.1-exon-3-1787993825:88007024..88007079mRNAPaHa03g35310.1
exon
part_ofPaHa03g35310.1-exon-3-1787993825:88007475..88007587mRNAPaHa03g35310.1
exon
part_ofPaHa03g35310.1-exon-3-1787993825:88008271..88008331mRNAPaHa03g35310.1
exon
part_ofPaHa03g35310.1-exon-3-1787993825:88009310..88009392mRNAPaHa03g35310.1
