Hass · gene

PaHa_c347g00050

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

318
bp
unplaced_contig_347:4,847–5,164
genomic location
Record overview

Feature identity

Identifier
PaHa_c347g00050
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
318 bp
Genomic location
unplaced_contig_347:4,847–5,164
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: 20347713 | Seed ortholog: 576137.A0A1L7X654 | COG: S | eggNOG OG: Ank_2@131567|VU-11, Ank_2@2759|AtS-15!, Ank_3@131567|Hd-14, NACHT@131567|Vm-19, NACHT@4751|CFb-33, NACHT@5178|DzM-38, NACHT_N@131567|A-1*, NACHT_N@451864|n-6, NACHT_N@4751|G-3
Gene Ontology
GO:0001727 lipid kinase activity; GO:0003674 molecular_function; GO:0004143 ATP-dependent diacylglycerol kinase activity; GO:0004857 enzyme inhibitor activity; GO:0005095 GTPase inhibitor activity; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006654 phosphatidic acid biosynthetic process; GO:0006661 phosphatidylinositol biosynthetic process; GO:0007269 neurotransmitter secretion; GO:0007602 phototransduction; GO:0007605 sensory perception of sound; GO:0007608 sensory perception of smell; GO:0008021 synaptic vesicle; GO:0008150 biological_process; GO:0014069 postsynaptic density; GO:0016056 G protein-coupled opsin signaling pathway; GO:0016059 negative regulation of opsin-mediated signaling pathway; GO:0016301 kinase activity; GO:0016477 cell migration; GO:0016607 nuclear speck; GO:0030027 lamellipodium; GO:0030168 platelet activation; GO:0031267 small GTPase binding; GO:0031571 mitotic G1 DNA damage checkpoint signaling; GO:0032045 guanyl-nucleotide exchange factor complex; GO:0032991 protein-containing complex; GO:0043025 neuronal cell body; GO:0043052 thermotaxis; GO:0043197 dendritic spine; GO:0043679 axon terminus; GO:0045202 synapse; GO:0045494 photoreceptor cell maintenance; GO:0046339 diacylglycerol metabolic process; GO:0046486 glycerolipid metabolic process; GO:0046579 positive regulation of Ras protein signal transduction; GO:0046580 negative regulation of Ras protein signal transduction; GO:0046834 lipid phosphorylation; GO:0046959 habituation; GO:0048190 wing disc dorsal/ventral pattern formation; GO:0048471 perinuclear region of cytoplasm; GO:0048786 presynaptic active zone; GO:0050860 negative regulation of T cell receptor signaling pathway; GO:0051966 regulation of synaptic transmission, glutamatergic; GO:0060076 excitatory synapse; GO:0060079 excitatory postsynaptic potential; GO:0097060 synaptic membrane; GO:0098685 Schaffer collateral - CA1 synapse; GO:0098793 presynapse; GO:0098794 postsynapse; GO:0098891 extrinsic component of presynaptic active zone membrane; GO:0098978 glutamatergic synapse; GO:0099147 extrinsic component of postsynaptic density membrane; GO:0099171 presynaptic modulation of chemical synaptic transmission; GO:0099562 maintenance of postsynaptic density structure; GO:1900452 regulation of long-term synaptic depression
KEGG
EC: ec:1.14.11.2, ec:1.3.5.1, ec:2.3.2.27, ec:2.7.1.107, ec:2.7.11.1 | KO: K21440 | Pathway: 00020, 00190, 00330, 00561, 00564, 01100, 01200, 04070, 04072, 05231 | Module: M00009, M00011, M00148 | BRITE: 00001, 04131
Biological context

Connected feature records

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