Hass · gene

PaHa_c274g00100

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

507
bp
unplaced_contig_274:12,363–12,869
genomic location
Record overview

Feature identity

Identifier
PaHa_c274g00100
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
507 bp
Genomic location
unplaced_contig_274:12,363–12,869
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: Ephx2 | Seed ortholog: 56484.A0A1Y2F1G3 | COG: S | eggNOG OG: Abhydrolase_1@131567|Aen-19, Abhydrolase_1@2759|EKC-24
Gene Ontology
GO:0000278 mitotic cell cycle; GO:0000287 magnesium ion binding; GO:0000324 fungal-type vacuole; GO:0000902 cell morphogenesis; GO:0001523 retinoid metabolic process; GO:0001558 regulation of cell growth; GO:0001650 fibrillar center; GO:0001666 response to hypoxia; GO:0001889 liver development; GO:0001935 endothelial cell proliferation; GO:0002021 response to dietary excess; GO:0002244 hematopoietic progenitor cell differentiation; GO:0002526 acute inflammatory response; GO:0002536 respiratory burst involved in inflammatory response; GO:0002539 prostaglandin production involved in inflammatory response; GO:0003674 molecular_function; GO:0004301 epoxide hydrolase activity; GO:0004465 lipoprotein lipase activity; GO:0004620 glycerophospholipase activity; GO:0004771 sterol ester esterase activity; GO:0004806 triacylglycerol lipase activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005576 extracellular region; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005764 lysosome; GO:0005773 vacuole; GO:0005777 peroxisome; GO:0005782 peroxisomal matrix; GO:0005811 lipid droplet; GO:0005829 cytosol; GO:0006006 glucose metabolic process; GO:0006096 glycolytic process; GO:0006108 malate metabolic process; GO:0006629 lipid metabolic process; GO:0006631 fatty acid metabolic process; GO:0006638 neutral lipid metabolic process; GO:0006641 triglyceride metabolic process; GO:0006695 cholesterol biosynthetic process; GO:0006754 ATP biosynthetic process; GO:0006776 vitamin A metabolic process; GO:0006897 endocytosis; GO:0006954 inflammatory response; GO:0007005 mitochondrion organization; GO:0007040 lysosome organization; GO:0007173 epidermal growth factor receptor signaling pathway; GO:0007264 small GTPase-mediated signal transduction; GO:0007320 insemination; GO:0007618 mating; GO:0007626 locomotory behavior; GO:0008150 biological_process; GO:0008203 cholesterol metabolic process; GO:0008204 ergosterol metabolic process; GO:0008283 cell population proliferation; GO:0008289 lipid binding; GO:0008333 endosome to lysosome transport; GO:0008340 determination of adult lifespan; GO:0008610 lipid biosynthetic process; GO:0009409 response to cold; GO:0009410 response to xenobiotic stimulus; GO:0010467 gene expression; GO:0010628 positive regulation of gene expression; GO:0010878 cholesterol storage; GO:0012501 programmed cell death; GO:0015643 toxic substance binding; GO:0016020 membrane; GO:0016042 lipid catabolic process; GO:0016125 sterol metabolic process; GO:0016298 lipase activity; GO:0016311 dephosphorylation; GO:0016615 malate dehydrogenase activity; GO:0016791 phosphatase activity; GO:0017171 serine hydrolase activity; GO:0019915 lipid storage; GO:0030097 hemopoiesis; GO:0030099 myeloid cell differentiation; GO:0030140 trans-Golgi network transport vesicle; GO:0030217 T cell differentiation; GO:0030301 cholesterol transport; GO:0030324 lung development; GO:0030421 defecation; GO:0031929 TOR signaling; GO:0033028 myeloid cell apoptotic process; GO:0033189 response to vitamin A; GO:0033344 cholesterol efflux; GO:0033885 10-hydroxy-9-(phosphonooxy)octadecanoate phosphatase activity; GO:0033993 response to lipid; GO:0034383 low-density lipoprotein particle clearance; GO:0035726 common myeloid progenitor cell proliferation; GO:0042098 T cell proliferation; GO:0042159 lipoprotein catabolic process; GO:0042391 regulation of membrane potential; GO:0042551 neuron maturation; GO:0042577 lipid phosphatase activity; GO:0042609 CD4 receptor binding; GO:0042632 cholesterol homeostasis; GO:0042803 protein homodimerization activity; GO:0043202 lysosomal lumen; GO:0043651 linoleic acid metabolic process; GO:0045777 positive regulation of blood pressure; GO:0046272 stilbene catabolic process; GO:0046839 phospholipid dephosphorylation; GO:0048536 spleen development; GO:0048538 thymus development; GO:0048539 bone marrow development; GO:0048668 collateral sprouting; GO:0048771 tissue remodeling; GO:0048871 multicellular organismal-level homeostasis; GO:0048872 homeostasis of number of cells; GO:0048873 homeostasis of number of cells within a tissue; GO:0050851 antigen receptor-mediated signaling pathway; GO:0050862 positive regulation of T cell receptor signaling pathway; GO:0050905 neuromuscular process; GO:0051881 regulation of mitochondrial membrane potential; GO:0052642 lysophosphatidic acid phosphatase activity; GO:0055088 lipid homeostasis; GO:0060173 limb development; GO:0060612 adipose tissue development; GO:0060837 blood vessel endothelial cell differentiation; GO:0060841 venous blood vessel development; GO:0070062 extracellular exosome; GO:0070231 T cell apoptotic process; GO:0070268 cornification; GO:0070341 fat cell proliferation; GO:0070849 response to epidermal growth factor; GO:0071830 triglyceride-rich lipoprotein particle clearance; GO:0071838 cell proliferation in bone marrow; GO:0072576 liver morphogenesis; GO:0090181 regulation of cholesterol metabolic process; GO:0097009 energy homeostasis; GO:0097176 epoxide metabolic process; GO:0140354 lipid import into cell; GO:0140962 multicellular organismal-level chemical homeostasis; GO:1901355 response to rapamycin; GO:1903409 reactive oxygen species biosynthetic process; GO:1904681 response to 3-methylcholanthrene; GO:1990845 adaptive thermogenesis
KEGG
EC: ec:2.3.1.12, ec:3.1.3.76, ec:3.3.2.10 | KO: K00627, K03124, K08726 | Pathway: 00010, 00020, 00590, 00620, 00785, 01100, 01110, 01200, 01210, 03022, 04146 | Module: M00307 | BRITE: 00001, 01000, 01002, 01009, 01601, 03021
Biological context

Connected feature records

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