Hass · gene

PaHa_c215g00060

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

852
bp
unplaced_contig_215:8,504–9,462
genomic location
Record overview

Feature identity

Identifier
PaHa_c215g00060
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
852 bp
Genomic location
unplaced_contig_215:8,504–9,462
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: ICL1 | Seed ortholog: 56484.A0A1Y2EZH0 | COG: S | eggNOG OG: ICL@131567|A-1, ICL@2759|HO-13
Gene Ontology
GO:0004451 isocitrate lyase activity; GO:0005575 cellular_component; GO:0005737 cytoplasm; GO:0005773 vacuole; GO:0005777 peroxisome; GO:0005782 peroxisomal matrix; GO:0005829 cytosol; GO:0006097 glyoxylate cycle; GO:0009062 fatty acid catabolic process; GO:0009514 glyoxysome; GO:0015976 carbon utilization; GO:0045733 acetate catabolic process; GO:0046421 methylisocitrate lyase activity
KEGG
EC: ec:4.1.3.1, ec:4.1.3.30 | KO: K01637 | Pathway: 00630, 01100, 01110, 01200 | Module: M00012 | BRITE: 00001, 01000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.