Hass · gene

PaHa_c202g00190

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

366
bp
unplaced_contig_202:23,377–23,742
genomic location
Record overview

Feature identity

Identifier
PaHa_c202g00190
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
366 bp
Genomic location
unplaced_contig_202:23,377–23,742
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: rhlG | Seed ortholog: 56484.A0A1Y2F2X3 | COG: COG1028 | eggNOG OG: adh_short_C2@131567|BFN-21
Gene Ontology
GO:0000253 3-beta-hydroxysteroid 3-dehydrogenase (NADP+) activity; GO:0001523 retinoid metabolic process; GO:0001758 retinal dehydrogenase (NAD+) activity; GO:0003674 molecular_function; GO:0003824 catalytic activity; GO:0004090 carbonyl reductase (NADPH) activity; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005635 nuclear envelope; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005777 peroxisome; GO:0005778 peroxisomal membrane; GO:0005782 peroxisomal matrix; GO:0005789 endoplasmic reticulum membrane; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0005998 xylulose catabolic process; GO:0006066 alcohol metabolic process; GO:0008150 biological_process; GO:0008202 steroid metabolic process; GO:0009507 chloroplast; GO:0009636 response to toxic substance; GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor; GO:0018455 alcohol dehydrogenase [NAD(P)+] activity; GO:0022900 electron transport chain; GO:0033703 3-beta-hydroxy-5-beta-steroid dehydrogenase (NADP+) activity; GO:0034599 cellular response to oxidative stress; GO:0042180 ketone metabolic process; GO:0042574 retinal metabolic process; GO:0042802 identical protein binding; GO:0043011 myeloid dendritic cell differentiation; GO:0043066 negative regulation of apoptotic process; GO:0048767 root hair elongation; GO:0050038 L-xylulose reductase (NADPH) activity; GO:0052650 all-trans-retinol dehydrogenase (NADP+) activity; GO:0080024 indolebutyric acid metabolic process; GO:0080026 response to indolebutyric acid; GO:2000379 positive regulation of reactive oxygen species metabolic process
KEGG
EC: ec:1.1.1.10, ec:1.1.1.100, ec:1.1.1.159, ec:1.1.1.173, ec:1.1.1.289, ec:1.1.1.30, ec:1.1.1.304, ec:1.1.1.36, ec:1.1.1.377, ec:1.1.1.378, ec:1.1.1.413, ec:1.1.1.47, ec:1.1.1.53, ec:1.1.1.69, ec:1.1.1.76, ec:1.14.14.54, ec:1.5.1.33, ec:3.5.4.5, ec:3.6.1.52, ec:4.2.1.8 | KO: K00019, K00023, K00034, K00038, K00046, K00059, K00076, K01489, K01686, K03331, K03366, K03793, K07535, K07766, K10437, K11147, K11164, K12420, K12880, K17742, K17800, K18009, K18337, K22322, K22611 | Pathway: 00030, 00040, 00051, 00061, 00121, 00240, 00253, 00333, 00360, 00362, 00630, 00650, 00780, 00790, 00830, 01056, 01100, 01110, 01120, 01200, 01212, 01220, 01232, 01240, 03013, 03040, 04146 | Module: M00014, M00061, M00083, M00088, M00373, M00540, M00572, M00778, M00874 | BRITE: 00001, 00199, 01000, 01004, 01008, 02000, 03019, 03029, 03036, 03041
Biological context

Connected feature records

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