Feature identity
- Identifier
- PaHa03g31530.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 996 bp
- Genomic location
- 3:81,792,053–81,794,076
- Strand
- −
Hass · mRNA
PaHa03g31530.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 996
- bp
- 3:81,792,053–81,794,076
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g31530
- eggNOG
- Preferred name: LOC104592471 | Seed ortholog: 337451.A0A3S3NY18 | COG: COG1398 | eggNOG OG: FA_desaturase@131567|h-6
- Gene Ontology
- GO:0005739 mitochondrion; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0006636 unsaturated fatty acid biosynthetic process; GO:0009507 chloroplast; GO:0009579 thylakoid; GO:0010025 wax biosynthetic process; GO:0010114 response to red light; GO:0010205 photoinhibition; GO:0016215 acyl-CoA desaturase activity; GO:0042761 very long-chain fatty acid biosynthetic process; GO:0102843 palmitoyl-[glycerolipid] 7-desaturase activity
- KEGG
- EC: ec:1.14.19.42 | KO: K20416 | Pathway: 01040, 01100, 01212 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g31530.1-protein
derives_frommRNAPaHa03g31530.1
mRNAPaHa03g31530.1
part_ofgenePaHa03g31530
CDS
part_ofPaHa03g31530.1-CDS-3-1787993825:81792053..81792266mRNAPaHa03g31530.1
CDS
part_ofPaHa03g31530.1-CDS-3-1787993825:81792354..81792385mRNAPaHa03g31530.1
CDS
part_ofPaHa03g31530.1-CDS-3-1787993825:81792449..81792460mRNAPaHa03g31530.1
CDS
part_ofPaHa03g31530.1-CDS-3-1787993825:81793091..81793231mRNAPaHa03g31530.1
CDS
part_ofPaHa03g31530.1-CDS-3-1787993825:81793333..81793473mRNAPaHa03g31530.1
CDS
part_ofPaHa03g31530.1-CDS-3-1787993825:81793568..81793631mRNAPaHa03g31530.1
CDS
part_ofPaHa03g31530.1-CDS-3-1787993825:81793685..81794076mRNAPaHa03g31530.1
exon
part_ofPaHa03g31530.1-exon-3-1787993825:81792053..81792266mRNAPaHa03g31530.1
exon
part_ofPaHa03g31530.1-exon-3-1787993825:81792354..81792385mRNAPaHa03g31530.1
exon
part_ofPaHa03g31530.1-exon-3-1787993825:81792449..81792460mRNAPaHa03g31530.1
exon
part_ofPaHa03g31530.1-exon-3-1787993825:81793091..81793231mRNAPaHa03g31530.1
exon
part_ofPaHa03g31530.1-exon-3-1787993825:81793333..81793473mRNAPaHa03g31530.1
exon
part_ofPaHa03g31530.1-exon-3-1787993825:81793568..81793631mRNAPaHa03g31530.1
exon
part_ofPaHa03g31530.1-exon-3-1787993825:81793685..81794076mRNAPaHa03g31530.1
