Feature identity
- Identifier
- PaHa_c159g00240
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 924 bp
- Genomic location
- unplaced_contig_159:19,653–20,576
- Strand
- −
Hass · gene
PaHa_c159g00240
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 924
- bp
- unplaced_contig_159:19,653–20,576
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: areA | Seed ortholog: 331657.A0A4U0WX60 | COG: S | eggNOG OG: GATA@131567|A-1*, GATA@2759|UK-15, GATA@4751|BeL-24
- Gene Ontology
- GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0006338 chromatin remodeling; GO:0006808 regulation of nitrogen utilization; GO:0008270 zinc ion binding; GO:0010468 regulation of gene expression; GO:0031138 negative regulation of conjugation with cellular fusion; GO:0032153 cell division site; GO:0043565 sequence-specific DNA binding; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:1900081 regulation of arginine catabolic process
- KEGG
- EC: ec:2.7.11.22 | KO: K09184 | Pathway: 03082, 03250, 04022, 04218, 04530, 04658, 04659, 04919, 04928, 05321 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
genePaHa_c159g00240
