Feature identity
- Identifier
- PaHa03g30550.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,386 bp
- Genomic location
- 3:80,089,878–80,096,973
- Strand
- +
Hass · mRNA
PaHa03g30550.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,386
- bp
- 3:80,089,878–80,096,973
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g30550
- eggNOG
- Preferred name: AIL6 | Seed ortholog: 337451.A0A3S3Q2B2 | COG: S | eggNOG OG: AP2@131567|Eo-12, AP2@3193|Apr-24, AP2@33090|Xs-18, AP2@3398|BfV-26, AP2@58023|BJE-25
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009908 flower development; GO:0010080 regulation of floral meristem growth; GO:0010311 lateral root formation; GO:0010492 maintenance of shoot apical meristem identity; GO:0035265 organ growth; GO:0048364 root development; GO:0060771 phyllotactic patterning; GO:0060772 leaf phyllotactic patterning; GO:1905392 plant organ morphogenesis; GO:1990110 callus formation
- KEGG
- KO: K09285 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g30550.1-protein
derives_frommRNAPaHa03g30550.1
mRNAPaHa03g30550.1
part_ofgenePaHa03g30550
CDS
part_ofPaHa03g30550.1-CDS-3-1787993825:80089878..80090043mRNAPaHa03g30550.1
CDS
part_ofPaHa03g30550.1-CDS-3-1787993825:80090637..80091132mRNAPaHa03g30550.1
CDS
part_ofPaHa03g30550.1-CDS-3-1787993825:80091222..80091304mRNAPaHa03g30550.1
CDS
part_ofPaHa03g30550.1-CDS-3-1787993825:80094328..80094336mRNAPaHa03g30550.1
CDS
part_ofPaHa03g30550.1-CDS-3-1787993825:80094449..80094537mRNAPaHa03g30550.1
CDS
part_ofPaHa03g30550.1-CDS-3-1787993825:80095238..80095311mRNAPaHa03g30550.1
CDS
part_ofPaHa03g30550.1-CDS-3-1787993825:80095825..80095875mRNAPaHa03g30550.1
CDS
part_ofPaHa03g30550.1-CDS-3-1787993825:80095977..80096053mRNAPaHa03g30550.1
CDS
part_ofPaHa03g30550.1-CDS-3-1787993825:80096633..80096973mRNAPaHa03g30550.1
exon
part_ofPaHa03g30550.1-exon-3-1787993825:80089878..80090043mRNAPaHa03g30550.1
exon
part_ofPaHa03g30550.1-exon-3-1787993825:80090637..80091132mRNAPaHa03g30550.1
exon
part_ofPaHa03g30550.1-exon-3-1787993825:80091222..80091304mRNAPaHa03g30550.1
exon
part_ofPaHa03g30550.1-exon-3-1787993825:80094328..80094336mRNAPaHa03g30550.1
exon
part_ofPaHa03g30550.1-exon-3-1787993825:80094449..80094537mRNAPaHa03g30550.1
exon
part_ofPaHa03g30550.1-exon-3-1787993825:80095238..80095311mRNAPaHa03g30550.1
exon
part_ofPaHa03g30550.1-exon-3-1787993825:80095825..80095875mRNAPaHa03g30550.1
exon
part_ofPaHa03g30550.1-exon-3-1787993825:80095977..80096053mRNAPaHa03g30550.1
exon
part_ofPaHa03g30550.1-exon-3-1787993825:80096633..80096973mRNAPaHa03g30550.1
