Feature identity
- Identifier
- PaHa03g30430.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 666 bp
- Genomic location
- 3:79,891,682–79,895,565
- Strand
- −
Hass · mRNA
PaHa03g30430.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 666
- bp
- 3:79,891,682–79,895,565
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g30430
- eggNOG
- Preferred name: LOC104595487 | Seed ortholog: 337451.A0A3S3Q136 | COG: S | eggNOG OG: PTPLA@131567|C-2
- Gene Ontology
- GO:0004725 protein tyrosine phosphatase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0005829 cytosol; GO:0009923 fatty acid elongase complex; GO:0018812 3-hydroxyacyl-CoA dehydratase activity; GO:0030154 cell differentiation; GO:0042761 very long-chain fatty acid biosynthetic process; GO:0048640 negative regulation of developmental growth; GO:0051302 regulation of cell division; GO:0102158 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase activity
- KEGG
- EC: ec:4.2.1.134 | KO: K10703 | Pathway: 00062, 01040, 01100, 01110, 01212 | Module: M00415 | BRITE: 00001, 01000, 01004
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g30430.1-protein
derives_frommRNAPaHa03g30430.1
mRNAPaHa03g30430.1
part_ofgenePaHa03g30430
CDS
part_ofPaHa03g30430.1-CDS-3-1787993825:79891682..79891752mRNAPaHa03g30430.1
CDS
part_ofPaHa03g30430.1-CDS-3-1787993825:79891869..79891965mRNAPaHa03g30430.1
CDS
part_ofPaHa03g30430.1-CDS-3-1787993825:79892715..79892796mRNAPaHa03g30430.1
CDS
part_ofPaHa03g30430.1-CDS-3-1787993825:79892873..79892943mRNAPaHa03g30430.1
CDS
part_ofPaHa03g30430.1-CDS-3-1787993825:79894427..79894480mRNAPaHa03g30430.1
CDS
part_ofPaHa03g30430.1-CDS-3-1787993825:79894600..79894688mRNAPaHa03g30430.1
CDS
part_ofPaHa03g30430.1-CDS-3-1787993825:79895175..79895193mRNAPaHa03g30430.1
CDS
part_ofPaHa03g30430.1-CDS-3-1787993825:79895296..79895407mRNAPaHa03g30430.1
CDS
part_ofPaHa03g30430.1-CDS-3-1787993825:79895495..79895565mRNAPaHa03g30430.1
exon
part_ofPaHa03g30430.1-exon-3-1787993825:79891682..79891752mRNAPaHa03g30430.1
exon
part_ofPaHa03g30430.1-exon-3-1787993825:79891869..79891965mRNAPaHa03g30430.1
exon
part_ofPaHa03g30430.1-exon-3-1787993825:79892715..79892796mRNAPaHa03g30430.1
exon
part_ofPaHa03g30430.1-exon-3-1787993825:79892873..79892943mRNAPaHa03g30430.1
exon
part_ofPaHa03g30430.1-exon-3-1787993825:79894427..79894480mRNAPaHa03g30430.1
exon
part_ofPaHa03g30430.1-exon-3-1787993825:79894600..79894688mRNAPaHa03g30430.1
exon
part_ofPaHa03g30430.1-exon-3-1787993825:79895175..79895193mRNAPaHa03g30430.1
exon
part_ofPaHa03g30430.1-exon-3-1787993825:79895296..79895407mRNAPaHa03g30430.1
exon
part_ofPaHa03g30430.1-exon-3-1787993825:79895495..79895565mRNAPaHa03g30430.1
