Feature identity
- Identifier
- PaHa_c114g00350
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 999 bp
- Genomic location
- unplaced_contig_114:48,176–49,222
- Strand
- +
Hass · gene
PaHa_c114g00350
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 999
- bp
- unplaced_contig_114:48,176–49,222
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: CPR6 | Seed ortholog: 857342.A0A2T3BDM5 | COG: COG0652 | eggNOG OG: Pro_isomerase@131567|G-3
- Gene Ontology
- GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000413 protein peptidyl-prolyl isomerization; GO:0003674 molecular_function; GO:0003729 mRNA binding; GO:0003755 peptidyl-prolyl cis-trans isomerase activity; GO:0005515 protein binding; GO:0005528 FK506 binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005929 cilium; GO:0006457 protein folding; GO:0006979 response to oxidative stress; GO:0007165 signal transduction; GO:0007283 spermatogenesis; GO:0008134 transcription factor binding; GO:0009507 chloroplast; GO:0009535 chloroplast thylakoid membrane; GO:0009570 chloroplast stroma; GO:0009579 thylakoid; GO:0009642 response to light intensity; GO:0009651 response to salt stress; GO:0009737 response to abscisic acid; GO:0009941 chloroplast envelope; GO:0010050 vegetative phase change; GO:0010555 response to mannitol; GO:0010582 floral meristem determinacy; GO:0016018 cyclosporin A binding; GO:0019076 viral release from host cell; GO:0019344 L-cysteine biosynthetic process; GO:0019899 enzyme binding; GO:0022626 cytosolic ribosome; GO:0030331 nuclear estrogen receptor binding; GO:0030544 Hsp70 protein binding; GO:0031072 heat shock protein binding; GO:0031977 thylakoid lumen; GO:0033142 nuclear progesterone receptor binding; GO:0034389 lipid droplet organization; GO:0034587 piRNA processing; GO:0043065 positive regulation of apoptotic process; GO:0043066 negative regulation of apoptotic process; GO:0045070 positive regulation of viral genome replication; GO:0048046 apoplast; GO:0050714 positive regulation of protein secretion; GO:0051879 Hsp90 protein binding; GO:0051881 regulation of mitochondrial membrane potential; GO:0065003 protein-containing complex assembly; GO:0070922 RISC complex assembly; GO:0071492 cellular response to UV-A; GO:0101031 protein folding chaperone complex; GO:0140991 piRNA-mediated gene silencing by mRNA destabilization
- KEGG
- EC: ec:5.2.1.8 | KO: K05864 | Pathway: 00100, 01100, 01110, 03040, 04217, 04218, 05010, 05022 | Module: M00101, M00102 | BRITE: 00001, 01000, 03110
Biological context
Connected feature records
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genePaHa_c114g00350
