PaHa03g30160.1

Hass · mRNA

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,509: bp
3:79,433,476–79,449,032: genomic location

Record overview

Feature identity

Identifier: PaHa03g30160.1
Feature type: mRNA
Genome collection: Hass
Organism: Persea americana-Hass
Sequence length: 1,509 bp
Genomic location: 3:79,433,476–79,449,032
Strand: −

Open original Tripal record

Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: PaHa03g30160

eggNOG: Preferred name: LOC104601948 | Seed ortholog: 337451.A0A3S3MD21 | COG: S | eggNOG OG: WD40@131567|PY-13, WD40@2759|wr-17, WD40@3398|Yri-35
Gene Ontology: GO:0000159 protein phosphatase type 2A complex; GO:0000329 fungal-type vacuole membrane; GO:0000705 achiasmate meiosis I; GO:0001100 negative regulation of exit from mitosis; GO:0002119 nematode larval development; GO:0003674 molecular_function; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005934 cellular bud tip; GO:0005935 cellular bud neck; GO:0009792 embryo development ending in birth or egg hatching; GO:0010971 positive regulation of G2/M transition of mitotic cell cycle; GO:0016237 microautophagy; GO:0019888 protein phosphatase regulator activity; GO:0031028 septation initiation signaling; GO:0040026 positive regulation of vulval development; GO:0040028 regulation of vulval development; GO:0043332 mating projection tip; GO:0043945 positive regulation of asexual sporulation resulting in formation of a cellular spore; GO:0044818 mitotic G2/M transition checkpoint; GO:0045143 homologous chromosome segregation; GO:0061586 positive regulation of transcription by transcription factor localization; GO:0071475 cellular hyperosmotic salinity response; GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint; GO:0098534 centriole assembly; GO:1900182 positive regulation of protein localization to nucleus; GO:1905477 positive regulation of protein localization to membrane; GO:2000786 positive regulation of autophagosome assembly
KEGG: KO: K04354 | Pathway: 03015 | BRITE: 00001, 01009, 03019, 03036

Biological context