Hass · gene

PaHa_c103g00090

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

327
bp
unplaced_contig_103:7,837–8,243
genomic location
Record overview

Feature identity

Identifier
PaHa_c103g00090
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
327 bp
Genomic location
unplaced_contig_103:7,837–8,243
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: pta1 | Seed ortholog: 1287680.R1ER59 | COG: S | eggNOG OG: SYMPK_PTA1_N@2759|A-1
Gene Ontology
GO:0003674 molecular_function; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005847 mRNA cleavage and polyadenylation specificity factor complex; GO:0008033 tRNA processing; GO:0008150 biological_process; GO:0009410 response to xenobiotic stimulus; GO:0030846 termination of RNA polymerase II transcription, poly(A)-coupled; GO:0180010 co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway
KEGG
KO: K06100 | Pathway: 03015 | BRITE: 00001, 03019, 03021
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.