Feature identity
- Identifier
- PaHa12g16620
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 396 bp
- Genomic location
- 12:48,278,224–48,282,269
- Strand
- +
Hass · gene
PaHa12g16620
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 396
- bp
- 12:48,278,224–48,282,269
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC108990274 | Seed ortholog: 337451.A0A3S3N577 | COG: S | eggNOG OG: HMG_box@131567|Aj-7, HMG_box@2759|Ii-12!, HMG_box@33090|xN-19
- Gene Ontology
- GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001708 cell fate specification; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006338 chromatin remodeling; GO:0007379 segment specification; GO:0008150 biological_process; GO:0008348 negative regulation of antimicrobial humoral response; GO:0008406 gonad development; GO:0016055 Wnt signaling pathway; GO:0017055 negative regulation of RNA polymerase II transcription preinitiation complex assembly; GO:0032392 DNA geometric change; GO:0032502 developmental process; GO:0035218 leg disc development; GO:0040025 vulval development; GO:0045892 negative regulation of DNA-templated transcription; GO:0045944 positive regulation of transcription by RNA polymerase II
- KEGG
- EC: ec:2.1.1.354 | KO: K10802, K11295, K11297, K22748, K24660 | Pathway: 00310, 01100, 03410, 04140, 04217, 04613 | BRITE: 00001, 01000, 03036, 03400, 04147
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPaHa12g16620.1
part_ofgenePaHa12g16620
