Feature identity
- Identifier
- PaHa03g29490.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 3,936 bp
- Genomic location
- 3:77,933,667–77,970,990
- Strand
- +
Hass · mRNA
PaHa03g29490.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,936
- bp
- 3:77,933,667–77,970,990
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g29490
- eggNOG
- Preferred name: DGK1 | Seed ortholog: 337451.A0A443NFF2 | COG: COG1597 | eggNOG OG: C1_1@131567|O-4, C1_1@2759|ZE-16, C1_1@3398|BRf-24, DAGK_acc@131567|Ev-13, DAGK_acc@2759|FY-14, DAGK_acc@3398|jF-27, DAGK_cat@131567|O-4!, DAGK_cat@2759|AGn-22, DAGK_cat@3398|DAz-29
- Gene Ontology
- GO:0005509 calcium ion binding; GO:0005737 cytoplasm; GO:0006654 phosphatidic acid biosynthetic process; GO:0006661 phosphatidylinositol biosynthetic process; GO:0009653 anatomical structure morphogenesis; GO:0030168 platelet activation; GO:0046339 diacylglycerol metabolic process; GO:0046834 lipid phosphorylation; GO:0050804 modulation of chemical synaptic transmission; GO:0050926 regulation of positive chemotaxis; GO:0071285 cellular response to lithium ion; GO:0071398 cellular response to fatty acid; GO:0141212 phospholipase C/protein kinase C signal transduction
- KEGG
- EC: ec:2.7.1.107 | KO: K00901 | Pathway: 00561, 00564, 01100, 01110, 04070 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g29490.1-protein
derives_frommRNAPaHa03g29490.1
mRNAPaHa03g29490.1
part_ofgenePaHa03g29490
CDS
part_ofPaHa03g29490.1-CDS-3-1787993825:77933667..77934839mRNAPaHa03g29490.1
CDS
part_ofPaHa03g29490.1-CDS-3-1787993825:77939892..77940258mRNAPaHa03g29490.1
CDS
part_ofPaHa03g29490.1-CDS-3-1787993825:77940871..77940947mRNAPaHa03g29490.1
CDS
part_ofPaHa03g29490.1-CDS-3-1787993825:77952831..77952950mRNAPaHa03g29490.1
CDS
part_ofPaHa03g29490.1-CDS-3-1787993825:77953043..77953207mRNAPaHa03g29490.1
CDS
part_ofPaHa03g29490.1-CDS-3-1787993825:77954728..77954865mRNAPaHa03g29490.1
CDS
part_ofPaHa03g29490.1-CDS-3-1787993825:77956595..77956708mRNAPaHa03g29490.1
CDS
part_ofPaHa03g29490.1-CDS-3-1787993825:77963364..77963472mRNAPaHa03g29490.1
CDS
part_ofPaHa03g29490.1-CDS-3-1787993825:77964469..77964578mRNAPaHa03g29490.1
CDS
part_ofPaHa03g29490.1-CDS-3-1787993825:77966960..77967070mRNAPaHa03g29490.1
CDS
part_ofPaHa03g29490.1-CDS-3-1787993825:77969539..77970990mRNAPaHa03g29490.1
exon
part_ofPaHa03g29490.1-exon-3-1787993825:77933667..77934839mRNAPaHa03g29490.1
exon
part_ofPaHa03g29490.1-exon-3-1787993825:77939892..77940258mRNAPaHa03g29490.1
exon
part_ofPaHa03g29490.1-exon-3-1787993825:77940871..77940947mRNAPaHa03g29490.1
exon
part_ofPaHa03g29490.1-exon-3-1787993825:77952831..77952950mRNAPaHa03g29490.1
exon
part_ofPaHa03g29490.1-exon-3-1787993825:77953043..77953207mRNAPaHa03g29490.1
exon
part_ofPaHa03g29490.1-exon-3-1787993825:77954728..77954865mRNAPaHa03g29490.1
exon
part_ofPaHa03g29490.1-exon-3-1787993825:77956595..77956708mRNAPaHa03g29490.1
exon
part_ofPaHa03g29490.1-exon-3-1787993825:77963364..77963472mRNAPaHa03g29490.1
exon
part_ofPaHa03g29490.1-exon-3-1787993825:77964469..77964578mRNAPaHa03g29490.1
exon
part_ofPaHa03g29490.1-exon-3-1787993825:77966960..77967070mRNAPaHa03g29490.1
exon
part_ofPaHa03g29490.1-exon-3-1787993825:77969539..77970990mRNAPaHa03g29490.1
