Feature identity
- Identifier
- PaHa03g29010.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,419 bp
- Genomic location
- 3:77,161,164–77,173,482
- Strand
- +
Hass · mRNA
PaHa03g29010.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,419
- bp
- 3:77,161,164–77,173,482
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g29010
- eggNOG
- Preferred name: SPL6 | Seed ortholog: 337451.A0A3S3MCB3 | COG: S | eggNOG OG: SBP@131567|A-1*, SBP@3193|S-5, SBP@33090|I-4, SBP@58023|EN-10
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010468 regulation of gene expression; GO:0042742 defense response to bacterium
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g29010.1-protein
derives_frommRNAPaHa03g29010.1
mRNAPaHa03g29010.1
part_ofgenePaHa03g29010
CDS
part_ofPaHa03g29010.1-CDS-3-1787993825:77161164..77161786mRNAPaHa03g29010.1
CDS
part_ofPaHa03g29010.1-CDS-3-1787993825:77170312..77170448mRNAPaHa03g29010.1
CDS
part_ofPaHa03g29010.1-CDS-3-1787993825:77172638..77172706mRNAPaHa03g29010.1
CDS
part_ofPaHa03g29010.1-CDS-3-1787993825:77172807..77172841mRNAPaHa03g29010.1
CDS
part_ofPaHa03g29010.1-CDS-3-1787993825:77172928..77173482mRNAPaHa03g29010.1
exon
part_ofPaHa03g29010.1-exon-3-1787993825:77161164..77161786mRNAPaHa03g29010.1
exon
part_ofPaHa03g29010.1-exon-3-1787993825:77170312..77170448mRNAPaHa03g29010.1
exon
part_ofPaHa03g29010.1-exon-3-1787993825:77172638..77172706mRNAPaHa03g29010.1
exon
part_ofPaHa03g29010.1-exon-3-1787993825:77172807..77172841mRNAPaHa03g29010.1
exon
part_ofPaHa03g29010.1-exon-3-1787993825:77172928..77173482mRNAPaHa03g29010.1
