Feature identity
- Identifier
- PaHa03g28970.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 687 bp
- Genomic location
- 3:77,053,761–77,068,987
- Strand
- −
Hass · mRNA
PaHa03g28970.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 687
- bp
- 3:77,053,761–77,068,987
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g28970
- eggNOG
- Preferred name: AP1 | Seed ortholog: 337451.A0A3S3Q204 | COG: S | eggNOG OG: K-box@131567|A-1*, K-box@2759|Ah-7, K-box@3398|Cj-9, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3193|jV-20, SRF-TF@3398|sl-21!, SRF-TF@35493|bP-19
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009631 cold acclimation; GO:0009908 flower development; GO:0009911 positive regulation of flower development; GO:0009933 meristem structural organization; GO:0010048 vernalization response; GO:0010077 maintenance of inflorescence meristem identity; GO:0010154 fruit development; GO:0010220 positive regulation of vernalization response; GO:0010221 negative regulation of vernalization response; GO:0010582 floral meristem determinacy; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0060560 developmental growth involved in morphogenesis; GO:2000028 regulation of photoperiodism, flowering
- KEGG
- KO: K09264 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g28970.1-protein
derives_frommRNAPaHa03g28970.1
mRNAPaHa03g28970.1
part_ofgenePaHa03g28970
CDS
part_ofPaHa03g28970.1-CDS-3-1787993825:77053761..77053872mRNAPaHa03g28970.1
CDS
part_ofPaHa03g28970.1-CDS-3-1787993825:77062557..77062660mRNAPaHa03g28970.1
CDS
part_ofPaHa03g28970.1-CDS-3-1787993825:77062813..77062854mRNAPaHa03g28970.1
CDS
part_ofPaHa03g28970.1-CDS-3-1787993825:77064958..77065057mRNAPaHa03g28970.1
CDS
part_ofPaHa03g28970.1-CDS-3-1787993825:77065131..77065195mRNAPaHa03g28970.1
CDS
part_ofPaHa03g28970.1-CDS-3-1787993825:77065344..77065422mRNAPaHa03g28970.1
CDS
part_ofPaHa03g28970.1-CDS-3-1787993825:77068803..77068987mRNAPaHa03g28970.1
exon
part_ofPaHa03g28970.1-exon-3-1787993825:77053761..77053872mRNAPaHa03g28970.1
exon
part_ofPaHa03g28970.1-exon-3-1787993825:77062557..77062660mRNAPaHa03g28970.1
exon
part_ofPaHa03g28970.1-exon-3-1787993825:77062813..77062854mRNAPaHa03g28970.1
exon
part_ofPaHa03g28970.1-exon-3-1787993825:77064958..77065057mRNAPaHa03g28970.1
exon
part_ofPaHa03g28970.1-exon-3-1787993825:77065131..77065195mRNAPaHa03g28970.1
exon
part_ofPaHa03g28970.1-exon-3-1787993825:77065344..77065422mRNAPaHa03g28970.1
exon
part_ofPaHa03g28970.1-exon-3-1787993825:77068803..77068987mRNAPaHa03g28970.1
