Feature identity
- Identifier
- PaHa03g28830.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,134 bp
- Genomic location
- 3:76,831,332–76,835,741
- Strand
- +
Hass · mRNA
PaHa03g28830.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,134
- bp
- 3:76,831,332–76,835,741
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g28830
- eggNOG
- Preferred name: LOC107761037 | Seed ortholog: 337451.A0A443NF76 | COG: S | eggNOG OG: CBFD_NFYB_HMF@131567|BS-10, CBFD_NFYB_HMF@2759|GM-15, CBFD_NFYB_HMF@33090|Bcx-31, CBFD_NFYB_HMF@3398|ETQ-40
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0009408 response to heat; GO:0009414 response to water deprivation; GO:0045893 positive regulation of DNA-templated transcription
- KEGG
- EC: ec:6.5.1.3 | KO: K08065 | Pathway: 04612, 05152, 05166 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g28830.1-protein
derives_frommRNAPaHa03g28830.1
mRNAPaHa03g28830.1
part_ofgenePaHa03g28830
CDS
part_ofPaHa03g28830.1-CDS-3-1787993825:76831332..76831975mRNAPaHa03g28830.1
CDS
part_ofPaHa03g28830.1-CDS-3-1787993825:76835179..76835399mRNAPaHa03g28830.1
CDS
part_ofPaHa03g28830.1-CDS-3-1787993825:76835473..76835741mRNAPaHa03g28830.1
exon
part_ofPaHa03g28830.1-exon-3-1787993825:76831332..76831975mRNAPaHa03g28830.1
exon
part_ofPaHa03g28830.1-exon-3-1787993825:76835179..76835399mRNAPaHa03g28830.1
exon
part_ofPaHa03g28830.1-exon-3-1787993825:76835473..76835741mRNAPaHa03g28830.1
