Feature identity
- Identifier
- PaHa03g28540.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 759 bp
- Genomic location
- 3:76,360,235–76,362,155
- Strand
- −
Hass · mRNA
PaHa03g28540.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 759
- bp
- 3:76,360,235–76,362,155
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g28540
- eggNOG
- Preferred name: FKBP17-2 | Seed ortholog: 29760.D7SJ95 | COG: COG0545 | eggNOG OG: FKBP_C@131567|JD-12
- Gene Ontology
- GO:0003755 peptidyl-prolyl cis-trans isomerase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008150 biological_process; GO:0009507 chloroplast; GO:0009535 chloroplast thylakoid membrane; GO:0016491 oxidoreductase activity
- KEGG
- EC: ec:5.2.1.8 | KO: K01802 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g28540.1-protein
derives_frommRNAPaHa03g28540.1
mRNAPaHa03g28540.1
part_ofgenePaHa03g28540
CDS
part_ofPaHa03g28540.1-CDS-3-1787993825:76360235..76360589mRNAPaHa03g28540.1
CDS
part_ofPaHa03g28540.1-CDS-3-1787993825:76361671..76361712mRNAPaHa03g28540.1
CDS
part_ofPaHa03g28540.1-CDS-3-1787993825:76361794..76362155mRNAPaHa03g28540.1
exon
part_ofPaHa03g28540.1-exon-3-1787993825:76360235..76360589mRNAPaHa03g28540.1
exon
part_ofPaHa03g28540.1-exon-3-1787993825:76361671..76361712mRNAPaHa03g28540.1
exon
part_ofPaHa03g28540.1-exon-3-1787993825:76361794..76362155mRNAPaHa03g28540.1
