Hass · gene

PaHa11g11970

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,323
bp
11:38,263,115–38,265,712
genomic location
Record overview

Feature identity

Identifier
PaHa11g11970
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
1,323 bp
Genomic location
11:38,263,115–38,265,712
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC123104645 | Seed ortholog: 337451.A0A443PNN1 | COG: S | eggNOG OG: B56@131567|A-1*, B56@2759|C-2!
Gene Ontology
GO:0000159 protein phosphatase type 2A complex; GO:0000398 mRNA splicing, via spliceosome; GO:0000775 chromosome, centromeric region; GO:0000776 kinetochore; GO:0000779 condensed chromosome, centromeric region; GO:0000939 inner kinetochore; GO:0001932 regulation of protein phosphorylation; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005777 peroxisome; GO:0005794 Golgi apparatus; GO:0005813 centrosome; GO:0005816 spindle pole body; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0005935 cellular bud neck; GO:0006281 DNA repair; GO:0006555 L-methionine metabolic process; GO:0007059 chromosome segregation; GO:0007089 traversing start control point of mitotic cell cycle; GO:0007165 signal transduction; GO:0007274 neuromuscular synaptic transmission; GO:0007399 nervous system development; GO:0007528 neuromuscular junction development; GO:0008104 intracellular protein localization; GO:0008233 peptidase activity; GO:0008266 poly(U) RNA binding; GO:0008285 negative regulation of cell population proliferation; GO:0008340 determination of adult lifespan; GO:0008603 cAMP-dependent protein kinase regulator activity; GO:0009408 response to heat; GO:0009554 megasporogenesis; GO:0009556 microsporogenesis; GO:0009759 indole glucosinolate biosynthetic process; GO:0010090 trichome morphogenesis; GO:0010150 leaf senescence; GO:0010469 regulation of signaling receptor activity; GO:0010883 regulation of lipid storage; GO:0010888 negative regulation of lipid storage; GO:0010976 positive regulation of neuron projection development; GO:0016020 membrane; GO:0016239 positive regulation of macroautophagy; GO:0016485 protein processing; GO:0019210 kinase inhibitor activity; GO:0019888 protein phosphatase regulator activity; GO:0019900 kinase binding; GO:0019901 protein kinase binding; GO:0030018 Z disc; GO:0030154 cell differentiation; GO:0030330 DNA damage response, signal transduction by p53 class mediator; GO:0030587 sorocarp development; GO:0030674 protein-macromolecule adaptor activity; GO:0030695 GTPase regulator activity; GO:0031030 negative regulation of septation initiation signaling; GO:0031107 septin ring disassembly; GO:0031134 sister chromatid biorientation; GO:0031267 small GTPase binding; GO:0031334 positive regulation of protein-containing complex assembly; GO:0031348 negative regulation of defense response; GO:0031430 M band; GO:0031568 mitotic G1 cell size control checkpoint signaling; GO:0031578 mitotic spindle orientation checkpoint signaling; GO:0031952 regulation of protein autophosphorylation; GO:0032000 positive regulation of fatty acid beta-oxidation; GO:0032153 cell division site; GO:0032186 cellular bud neck septin ring organization; GO:0033353 L-methionine cycle; GO:0034605 cellular response to heat; GO:0035331 negative regulation of hippo signaling; GO:0040024 dauer larval development; GO:0042325 regulation of phosphorylation; GO:0042771 intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator; GO:0043066 negative regulation of apoptotic process; GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0043326 chemotaxis to folate; GO:0043327 chemotaxis to cAMP; GO:0044732 mitotic spindle pole body; GO:0045824 negative regulation of innate immune response; GO:0045879 negative regulation of smoothened signaling pathway; GO:0045880 positive regulation of smoothened signaling pathway; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0046627 negative regulation of insulin receptor signaling pathway; GO:0048870 cell motility; GO:0050730 regulation of peptidyl-tyrosine phosphorylation; GO:0051177 meiotic sister chromatid cohesion; GO:0051225 spindle assembly; GO:0051286 cell tip; GO:0051388 positive regulation of neurotrophin TRK receptor signaling pathway; GO:0051726 regulation of cell cycle; GO:0051754 meiotic sister chromatid cohesion, centromeric; GO:0051898 negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction; GO:0070194 synaptonemal complex disassembly; GO:0070199 establishment of protein localization to chromosome; GO:0070317 negative regulation of G0 to G1 transition; GO:0070328 triglyceride homeostasis; GO:0071363 cellular response to growth factor stimulus; GO:0072542 protein phosphatase activator activity; GO:0072687 meiotic spindle; GO:0080183 response to photooxidative stress; GO:0097225 sperm midpiece; GO:0097228 sperm principal piece; GO:0097479 synaptic vesicle localization; GO:0110085 mitotic actomyosin contractile ring; GO:1900056 negative regulation of leaf senescence; GO:1900458 negative regulation of brassinosteroid mediated signaling pathway; GO:1901002 positive regulation of response to salt stress; GO:1902426 deactivation of mitotic spindle assembly checkpoint; GO:1903077 negative regulation of protein localization to plasma membrane; GO:1903863 P granule assembly; GO:1904262 negative regulation of TORC1 signaling; GO:1904643 response to curcumin; GO:1990813 meiotic centromeric cohesion protection in anaphase I; GO:2000031 regulation of salicylic acid mediated signaling pathway; GO:2000377 regulation of reactive oxygen species metabolic process; GO:2000786 positive regulation of autophagosome assembly
KEGG
EC: ec:2.1.1.297 | KO: K11584 | Pathway: 03015 | BRITE: 00001, 01009, 03019, 03036
Biological context

Connected feature records

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