Feature identity
- Identifier
- PaHa03g24850.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,736 bp
- Genomic location
- 3:69,785,245–69,807,292
- Strand
- −
Hass · mRNA
PaHa03g24850.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,736
- bp
- 3:69,785,245–69,807,292
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g24850
- eggNOG
- Preferred name: LOC110786694 | Seed ortholog: 337451.A0A443NEE8 | COG: S | eggNOG OG: LNS2@131567|A-1, LNS2@58023|EL-17, Lipin_N@2759|A-1, Lipin_N@3193|Db-16, Lipin_mid@2759|A-1, Lipin_mid@3398|g-7
- Gene Ontology
- GO:0000139 Golgi membrane; GO:0000287 magnesium ion binding; GO:0000976 transcription cis-regulatory region binding; GO:0003674 molecular_function; GO:0003713 transcription coactivator activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006629 lipid metabolic process; GO:0006886 intracellular protein transport; GO:0008195 phosphatidate phosphatase activity; GO:0008654 phospholipid biosynthetic process; GO:0016036 cellular response to phosphate starvation; GO:0016791 phosphatase activity; GO:0019375 galactolipid biosynthetic process; GO:0032586 protein storage vacuole membrane; GO:0042826 histone deacetylase binding; GO:0042975 peroxisome proliferator activated receptor binding; GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding
- KEGG
- EC: ec:3.1.3.4 | KO: K15728 | Pathway: 00561, 00564, 01100, 01110 | Module: M00089 | BRITE: 00001, 01000, 01009
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g24850.1-protein
derives_frommRNAPaHa03g24850.1
mRNAPaHa03g24850.1
part_ofgenePaHa03g24850
CDS
part_ofPaHa03g24850.1-CDS-3-1787993825:69785245..69785301mRNAPaHa03g24850.1
CDS
part_ofPaHa03g24850.1-CDS-3-1787993825:69787567..69787665mRNAPaHa03g24850.1
CDS
part_ofPaHa03g24850.1-CDS-3-1787993825:69787745..69787873mRNAPaHa03g24850.1
CDS
part_ofPaHa03g24850.1-CDS-3-1787993825:69788445..69788488mRNAPaHa03g24850.1
CDS
part_ofPaHa03g24850.1-CDS-3-1787993825:69796390..69796462mRNAPaHa03g24850.1
CDS
part_ofPaHa03g24850.1-CDS-3-1787993825:69796811..69796897mRNAPaHa03g24850.1
CDS
part_ofPaHa03g24850.1-CDS-3-1787993825:69799298..69799382mRNAPaHa03g24850.1
CDS
part_ofPaHa03g24850.1-CDS-3-1787993825:69804911..69804984mRNAPaHa03g24850.1
CDS
part_ofPaHa03g24850.1-CDS-3-1787993825:69805099..69805691mRNAPaHa03g24850.1
CDS
part_ofPaHa03g24850.1-CDS-3-1787993825:69805798..69807292mRNAPaHa03g24850.1
exon
part_ofPaHa03g24850.1-exon-3-1787993825:69785245..69785301mRNAPaHa03g24850.1
exon
part_ofPaHa03g24850.1-exon-3-1787993825:69787567..69787665mRNAPaHa03g24850.1
exon
part_ofPaHa03g24850.1-exon-3-1787993825:69787745..69787873mRNAPaHa03g24850.1
exon
part_ofPaHa03g24850.1-exon-3-1787993825:69788445..69788488mRNAPaHa03g24850.1
exon
part_ofPaHa03g24850.1-exon-3-1787993825:69796390..69796462mRNAPaHa03g24850.1
exon
part_ofPaHa03g24850.1-exon-3-1787993825:69796811..69796897mRNAPaHa03g24850.1
exon
part_ofPaHa03g24850.1-exon-3-1787993825:69799298..69799382mRNAPaHa03g24850.1
exon
part_ofPaHa03g24850.1-exon-3-1787993825:69804911..69804984mRNAPaHa03g24850.1
exon
part_ofPaHa03g24850.1-exon-3-1787993825:69805099..69805691mRNAPaHa03g24850.1
exon
part_ofPaHa03g24850.1-exon-3-1787993825:69805798..69807292mRNAPaHa03g24850.1
