Feature identity
- Identifier
- PaHa03g23120.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,896 bp
- Genomic location
- 3:66,864,391–66,886,313
- Strand
- −
Hass · mRNA
PaHa03g23120.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,896
- bp
- 3:66,864,391–66,886,313
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g23120
- eggNOG
- Preferred name: ATR3 | Seed ortholog: 56857.A0A200PTB4 | COG: S | eggNOG OG: FAD_binding_1@131567|N-4, Flavodoxin_1@131567|Aw-10, Flavodoxin_1@2759|Gl-14, NAD_binding_1@131567|Ip-13, NAD_binding_1@2759|PH-15
- Gene Ontology
- GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009793 embryo development ending in seed dormancy; GO:0016651 oxidoreductase activity, acting on NAD(P)H
- KEGG
- EC: ec:1.6.2.4 | KO: K00327 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g23120.1-protein
derives_frommRNAPaHa03g23120.1
mRNAPaHa03g23120.1
part_ofgenePaHa03g23120
CDS
part_ofPaHa03g23120.1-CDS-3-1787993825:66864391..66864920mRNAPaHa03g23120.1
CDS
part_ofPaHa03g23120.1-CDS-3-1787993825:66865555..66865819mRNAPaHa03g23120.1
CDS
part_ofPaHa03g23120.1-CDS-3-1787993825:66868660..66868779mRNAPaHa03g23120.1
CDS
part_ofPaHa03g23120.1-CDS-3-1787993825:66874209..66874319mRNAPaHa03g23120.1
CDS
part_ofPaHa03g23120.1-CDS-3-1787993825:66875193..66875267mRNAPaHa03g23120.1
CDS
part_ofPaHa03g23120.1-CDS-3-1787993825:66880014..66880111mRNAPaHa03g23120.1
CDS
part_ofPaHa03g23120.1-CDS-3-1787993825:66880652..66880830mRNAPaHa03g23120.1
CDS
part_ofPaHa03g23120.1-CDS-3-1787993825:66882987..66883078mRNAPaHa03g23120.1
CDS
part_ofPaHa03g23120.1-CDS-3-1787993825:66884656..66884760mRNAPaHa03g23120.1
CDS
part_ofPaHa03g23120.1-CDS-3-1787993825:66884878..66884955mRNAPaHa03g23120.1
CDS
part_ofPaHa03g23120.1-CDS-3-1787993825:66885803..66885943mRNAPaHa03g23120.1
CDS
part_ofPaHa03g23120.1-CDS-3-1787993825:66886212..66886313mRNAPaHa03g23120.1
exon
part_ofPaHa03g23120.1-exon-3-1787993825:66864391..66864920mRNAPaHa03g23120.1
exon
part_ofPaHa03g23120.1-exon-3-1787993825:66865555..66865819mRNAPaHa03g23120.1
exon
part_ofPaHa03g23120.1-exon-3-1787993825:66868660..66868779mRNAPaHa03g23120.1
exon
part_ofPaHa03g23120.1-exon-3-1787993825:66874209..66874319mRNAPaHa03g23120.1
exon
part_ofPaHa03g23120.1-exon-3-1787993825:66875193..66875267mRNAPaHa03g23120.1
exon
part_ofPaHa03g23120.1-exon-3-1787993825:66880014..66880111mRNAPaHa03g23120.1
exon
part_ofPaHa03g23120.1-exon-3-1787993825:66880652..66880830mRNAPaHa03g23120.1
exon
part_ofPaHa03g23120.1-exon-3-1787993825:66882987..66883078mRNAPaHa03g23120.1
exon
part_ofPaHa03g23120.1-exon-3-1787993825:66884656..66884760mRNAPaHa03g23120.1
exon
part_ofPaHa03g23120.1-exon-3-1787993825:66884878..66884955mRNAPaHa03g23120.1
exon
part_ofPaHa03g23120.1-exon-3-1787993825:66885803..66885943mRNAPaHa03g23120.1
exon
part_ofPaHa03g23120.1-exon-3-1787993825:66886212..66886313mRNAPaHa03g23120.1
