Hass · gene

PaHa09g02730

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,470
bp
9:5,198,475–5,246,957
genomic location
Record overview

Feature identity

Identifier
PaHa09g02730
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
1,470 bp
Genomic location
9:5,198,475–5,246,957
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: SNF4 | Seed ortholog: 337451.A0A443PTQ2 | COG: S | eggNOG OG: AMPK1_CBM@131567|Bq-12, AMPK1_CBM@33090|Yh-23, CBS@131567|Di-9, CBS@2759|NX-13, CBS@33090|Agd-20, CBS@3398|CLk-23
Gene Ontology
GO:0000976 transcription cis-regulatory region binding; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0001555 oocyte growth; GO:0001701 in utero embryonic development; GO:0003674 molecular_function; GO:0004679 AMP-activated protein kinase activity; GO:0004691 cAMP-dependent protein kinase activity; GO:0004862 cAMP-dependent protein kinase inhibitor activity; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005575 cellular_component; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0005641 nuclear envelope lumen; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005788 endoplasmic reticulum lumen; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0005977 glycogen metabolic process; GO:0006110 regulation of glycolytic process; GO:0006357 regulation of transcription by RNA polymerase II; GO:0006468 protein phosphorylation; GO:0006629 lipid metabolic process; GO:0006754 ATP biosynthetic process; GO:0006914 autophagy; GO:0007031 peroxisome organization; GO:0007165 signal transduction; GO:0007283 spermatogenesis; GO:0008150 biological_process; GO:0008284 positive regulation of cell population proliferation; GO:0008603 cAMP-dependent protein kinase regulator activity; GO:0008607 phosphorylase kinase regulator activity; GO:0009267 cellular response to starvation; GO:0010468 regulation of gene expression; GO:0010508 positive regulation of autophagy; GO:0014873 response to muscle activity involved in regulation of muscle adaptation; GO:0016020 membrane; GO:0016126 sterol biosynthetic process; GO:0016208 AMP binding; GO:0019217 regulation of fatty acid metabolic process; GO:0019887 protein kinase regulator activity; GO:0019901 protein kinase binding; GO:0030295 protein kinase activator activity; GO:0030447 filamentous growth; GO:0030730 triglyceride storage; GO:0031139 positive regulation of conjugation with cellular fusion; GO:0031507 heterochromatin formation; GO:0031588 nucleotide-activated protein kinase complex; GO:0031669 cellular response to nutrient levels; GO:0032991 protein-containing complex; GO:0033148 positive regulation of intracellular estrogen receptor signaling pathway; GO:0035556 intracellular signal transduction; GO:0036170 filamentous growth of a population of unicellular organisms in response to starvation; GO:0036180 filamentous growth of a population of unicellular organisms in response to biotic stimulus; GO:0042595 behavioral response to starvation; GO:0042632 cholesterol homeostasis; GO:0042800 histone H3K4 methyltransferase activity; GO:0042802 identical protein binding; GO:0043531 ADP binding; GO:0043539 protein serine/threonine kinase activator activity; GO:0043627 response to estrogen; GO:0044666 MLL3/4 complex; GO:0044877 protein-containing complex binding; GO:0045719 negative regulation of glycogen biosynthetic process; GO:0045722 positive regulation of gluconeogenesis; GO:0045787 positive regulation of cell cycle; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0046320 regulation of fatty acid oxidation; GO:0046324 regulation of D-glucose import across plasma membrane; GO:0048477 oogenesis; GO:0050790 regulation of catalytic activity; GO:0051726 regulation of cell cycle; GO:0140945 histone H3K4 monomethyltransferase activity; GO:1904547 regulation of cellular response to glucose starvation; GO:2000217 regulation of invasive growth in response to glucose limitation
KEGG
EC: ec:2.1.1.354 | KO: K07200 | Pathway: 00310, 01100, 04068, 04152, 04211, 04213, 04371, 04530, 04710, 04714, 04910, 04920, 04921, 04922, 04931, 04932, 04934, 04936, 05410 | BRITE: 00001
Biological context

Connected feature records

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