Feature identity
- Identifier
- PaHa03g21180.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,041 bp
- Genomic location
- 3:63,892,541–63,911,583
- Strand
- −
Hass · mRNA
PaHa03g21180.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,041
- bp
- 3:63,892,541–63,911,583
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g21180
- eggNOG
- Preferred name: 11412285 | Seed ortholog: 337451.A0A3S3Q106 | COG: S | eggNOG OG: GIDE@131567|A-1, GIDE@2759|Bn-10, GIDE@3193|Mv-19, zf-C3HC4_3@131567|BuX-26
- Gene Ontology
- GO:0004842 ubiquitin-protein transferase activity; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0005777 peroxisome; GO:0005778 peroxisomal membrane; GO:0009507 chloroplast; GO:0009658 chloroplast organization; GO:0009707 chloroplast outer membrane; GO:0009941 chloroplast envelope; GO:0016558 protein import into peroxisome matrix; GO:0016567 protein ubiquitination; GO:0030162 regulation of proteolysis; GO:0031648 protein destabilization; GO:0031999 negative regulation of fatty acid beta-oxidation; GO:0032991 protein-containing complex; GO:0045037 protein import into chloroplast stroma; GO:1901002 positive regulation of response to salt stress; GO:1904215 regulation of protein import into chloroplast stroma
- KEGG
- EC: ec:2.3.2.27 | KO: K15688 | BRITE: 00001, 01000, 04121
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g21180.1-protein
derives_frommRNAPaHa03g21180.1
mRNAPaHa03g21180.1
part_ofgenePaHa03g21180
CDS
part_ofPaHa03g21180.1-CDS-3-1787993825:63892541..63892643mRNAPaHa03g21180.1
CDS
part_ofPaHa03g21180.1-CDS-3-1787993825:63900827..63900935mRNAPaHa03g21180.1
CDS
part_ofPaHa03g21180.1-CDS-3-1787993825:63901005..63901057mRNAPaHa03g21180.1
CDS
part_ofPaHa03g21180.1-CDS-3-1787993825:63903446..63903556mRNAPaHa03g21180.1
CDS
part_ofPaHa03g21180.1-CDS-3-1787993825:63903665..63903777mRNAPaHa03g21180.1
CDS
part_ofPaHa03g21180.1-CDS-3-1787993825:63907271..63907336mRNAPaHa03g21180.1
CDS
part_ofPaHa03g21180.1-CDS-3-1787993825:63907413..63907550mRNAPaHa03g21180.1
CDS
part_ofPaHa03g21180.1-CDS-3-1787993825:63909987..63910082mRNAPaHa03g21180.1
CDS
part_ofPaHa03g21180.1-CDS-3-1787993825:63910553..63910677mRNAPaHa03g21180.1
CDS
part_ofPaHa03g21180.1-CDS-3-1787993825:63911321..63911373mRNAPaHa03g21180.1
CDS
part_ofPaHa03g21180.1-CDS-3-1787993825:63911510..63911583mRNAPaHa03g21180.1
exon
part_ofPaHa03g21180.1-exon-3-1787993825:63892541..63892643mRNAPaHa03g21180.1
exon
part_ofPaHa03g21180.1-exon-3-1787993825:63900827..63900935mRNAPaHa03g21180.1
exon
part_ofPaHa03g21180.1-exon-3-1787993825:63901005..63901057mRNAPaHa03g21180.1
exon
part_ofPaHa03g21180.1-exon-3-1787993825:63903446..63903556mRNAPaHa03g21180.1
exon
part_ofPaHa03g21180.1-exon-3-1787993825:63903665..63903777mRNAPaHa03g21180.1
exon
part_ofPaHa03g21180.1-exon-3-1787993825:63907271..63907336mRNAPaHa03g21180.1
exon
part_ofPaHa03g21180.1-exon-3-1787993825:63907413..63907550mRNAPaHa03g21180.1
exon
part_ofPaHa03g21180.1-exon-3-1787993825:63909987..63910082mRNAPaHa03g21180.1
exon
part_ofPaHa03g21180.1-exon-3-1787993825:63910553..63910677mRNAPaHa03g21180.1
exon
part_ofPaHa03g21180.1-exon-3-1787993825:63911321..63911373mRNAPaHa03g21180.1
exon
part_ofPaHa03g21180.1-exon-3-1787993825:63911510..63911583mRNAPaHa03g21180.1
