Feature identity
- Identifier
- PaHa08g16570
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 501 bp
- Genomic location
- 8:49,498,649–49,499,149
- Strand
- +
Hass · gene
PaHa08g16570
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 501
- bp
- 8:49,498,649–49,499,149
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC109009044 | Seed ortholog: 337451.A0A3S3QRU7 | eggNOG OG: zf-RING_2@131567|BRj-26
- Gene Ontology
- GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000209 protein polyubiquitination; GO:0000578 embryonic axis specification; GO:0001221 transcription coregulator binding; GO:0003677 DNA binding; GO:0003714 transcription corepressor activity; GO:0004842 ubiquitin-protein transferase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006511 ubiquitin-dependent protein catabolic process; GO:0007389 pattern specification process; GO:0007409 axonogenesis; GO:0007616 long-term memory; GO:0008045 motor neuron axon guidance; GO:0008150 biological_process; GO:0008270 zinc ion binding; GO:0016567 protein ubiquitination; GO:0017015 regulation of transforming growth factor beta receptor signaling pathway; GO:0021501 prechordal plate formation; GO:0030163 protein catabolic process; GO:0030511 positive regulation of transforming growth factor beta receptor signaling pathway; GO:0030513 positive regulation of BMP signaling pathway; GO:0030517 negative regulation of axon extension; GO:0031398 positive regulation of protein ubiquitination; GO:0032184 SUMO polymer binding; GO:0035136 forelimb morphogenesis; GO:0042802 identical protein binding; GO:0044314 protein K27-linked ubiquitination; GO:0045892 negative regulation of DNA-templated transcription; GO:0045893 positive regulation of DNA-templated transcription; GO:0046332 SMAD binding; GO:0048149 behavioral response to ethanol; GO:0050681 nuclear androgen receptor binding; GO:0050767 regulation of neurogenesis; GO:0055113 epiboly involved in gastrulation with mouth forming second; GO:0060173 limb development; GO:0060384 innervation; GO:0060765 regulation of androgen receptor signaling pathway; GO:0060816 random inactivation of X chromosome; GO:0061061 muscle structure development; GO:0061630 ubiquitin protein ligase activity; GO:0070911 global genome nucleotide-excision repair; GO:0070936 protein K48-linked ubiquitination; GO:0085020 protein K6-linked ubiquitination; GO:0140297 DNA-binding transcription factor binding
- KEGG
- EC: ec:2.3.2.27 | KO: K19040 | Pathway: 04310 | BRITE: 00001, 01000, 04121
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPaHa08g16570.1
part_ofgenePaHa08g16570
