Hass · gene

PaHa08g14000

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

3,099
bp
8:43,098,175–43,104,692
genomic location
Record overview

Feature identity

Identifier
PaHa08g14000
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
3,099 bp
Genomic location
8:43,098,175–43,104,692
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC104613241 | Seed ortholog: 337451.A0A3S3PCV8 | COG: S | eggNOG OG: Cation_ATPase_C@131567|CF-13, Cation_ATPase_C@1437183|CeC-37, Cation_ATPase_C@3193|AbH-32, Cation_ATPase_C@35493|AAv-30, Cation_ATPase_N@131567|z-7, Cation_ATPase_N@1437183|FVL-30, E1-E2_ATPase@131221|KhZ-42, E1-E2_ATPase@131567|Ow-19, E1-E2_ATPase@1437183|RMc-46!, E1-E2_ATPase@35493|Ekd-37, Hydrolase@131567|CFH-26, Hydrolase@1437183|iRD-53, Hydrolase@3398|SyF-46, Hydrolase@35493|NXX-43
Gene Ontology
GO:0000139 Golgi membrane; GO:0000902 cell morphogenesis; GO:0001818 negative regulation of cytokine production; GO:0002119 nematode larval development; GO:0003056 regulation of vascular associated smooth muscle contraction; GO:0003407 neural retina development; GO:0005388 P-type calcium transporter activity; GO:0006357 regulation of transcription by RNA polymerase II; GO:0006816 calcium ion transport; GO:0006874 intracellular calcium ion homeostasis; GO:0006897 endocytosis; GO:0007283 spermatogenesis; GO:0007595 lactation; GO:0007605 sensory perception of sound; GO:0007626 locomotory behavior; GO:0008217 regulation of blood pressure; GO:0008361 regulation of cell size; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009555 pollen development; GO:0009567 double fertilization forming a zygote and endosperm; GO:0009624 response to nematode; GO:0009792 embryo development ending in birth or egg hatching; GO:0010629 negative regulation of gene expression; GO:0014832 urinary bladder smooth muscle contraction; GO:0016525 negative regulation of angiogenesis; GO:0021549 cerebellum development; GO:0021692 cerebellar Purkinje cell layer morphogenesis; GO:0021702 cerebellar Purkinje cell differentiation; GO:0021707 cerebellar granule cell differentiation; GO:0021766 hippocampus development; GO:0030182 neuron differentiation; GO:0030282 bone mineralization; GO:0030317 flagellated sperm motility; GO:0030501 positive regulation of bone mineralization; GO:0031505 fungal-type cell wall organization; GO:0033298 contractile vacuole organization; GO:0034220 monoatomic ion transmembrane transport; GO:0034505 tooth mineralization; GO:0038060 nitric oxide-cGMP-mediated signaling; GO:0040010 positive regulation of growth rate; GO:0040011 locomotion; GO:0040017 positive regulation of locomotion; GO:0042428 serotonin metabolic process; GO:0042472 inner ear morphogenesis; GO:0042742 defense response to bacterium; GO:0043069 negative regulation of programmed cell death; GO:0043537 negative regulation of blood vessel endothelial cell migration; GO:0045019 negative regulation of nitric oxide biosynthetic process; GO:0045299 otolith mineralization; GO:0045807 positive regulation of endocytosis; GO:0046068 cGMP metabolic process; GO:0048167 regulation of synaptic plasticity; GO:0048839 inner ear development; GO:0048840 otolith development; GO:0048919 posterior lateral line neuromast development; GO:0050808 synapse organization; GO:0050885 neuromuscular process controlling balance; GO:0050910 detection of mechanical stimulus involved in sensory perception of sound; GO:0051480 regulation of cytosolic calcium ion concentration; GO:0051481 negative regulation of cytosolic calcium ion concentration; GO:0051599 response to hydrostatic pressure; GO:0051928 positive regulation of calcium ion transport; GO:0055074 calcium ion homeostasis; GO:0055081 monoatomic anion homeostasis; GO:0055085 transmembrane transport; GO:0060088 auditory receptor cell stereocilium organization; GO:0060113 inner ear receptor cell differentiation; GO:0060119 inner ear receptor cell development; GO:0060349 bone morphogenesis; GO:0070588 calcium ion transmembrane transport; GO:0070885 negative regulation of calcineurin-NFAT signaling cascade; GO:0071305 cellular response to vitamin D; GO:0071386 cellular response to corticosterone stimulus; GO:0071466 cellular response to xenobiotic stimulus; GO:0071872 cellular response to epinephrine stimulus; GO:0071878 negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway; GO:0090102 cochlea development; GO:0097553 calcium ion transmembrane import into cytosol; GO:0098703 calcium ion import across plasma membrane; GO:0098736 negative regulation of the force of heart contraction; GO:0150104 transport across blood-brain barrier; GO:1900076 regulation of cellular response to insulin stimulus; GO:1900082 negative regulation of arginine catabolic process; GO:1901660 calcium ion export; GO:1902305 regulation of sodium ion transmembrane transport; GO:1902548 negative regulation of cellular response to vascular endothelial growth factor stimulus; GO:1902806 regulation of cell cycle G1/S phase transition; GO:1903078 positive regulation of protein localization to plasma membrane; GO:1903243 negative regulation of cardiac muscle hypertrophy in response to stress; GO:1903249 negative regulation of citrulline biosynthetic process; GO:1903779 regulation of cardiac conduction; GO:1905145 cellular response to acetylcholine; GO:1990034 calcium ion export across plasma membrane
KEGG
EC: ec:7.2.2.10 | KO: K01537 | Pathway: 04020, 04022, 04024, 04261, 04925, 04961, 04970, 04972, 04978 | BRITE: 00001, 01000
Biological context

Connected feature records

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