Feature identity
- Identifier
- PaHa08g12720
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 393 bp
- Genomic location
- 8:39,317,663–39,323,085
- Strand
- −
Hass · gene
PaHa08g12720
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 393
- bp
- 8:39,317,663–39,323,085
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: MLH1 | Seed ortholog: 1088818.A0A2I0BG22 | COG: COG0323 | eggNOG OG: DDT@131567|U-5, DNA_mis_repair@131567|g-9, HATPase_c_3@131567|QV-16, Mlh1_C@2759|A-1, WSD@131567|A-1*, WSD@2759|BF-8!
- Gene Ontology
- GO:0000785 chromatin; GO:0000976 transcription cis-regulatory region binding; GO:0001671 ATPase activator activity; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO:0003697 single-stranded DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0004519 endonuclease activity; GO:0004713 protein tyrosine kinase activity; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005634 nucleus; GO:0006312 mitotic recombination; GO:0008047 enzyme activator activity; GO:0008270 zinc ion binding; GO:0009555 pollen development; GO:0009845 seed germination; GO:0010154 fruit development; GO:0016887 ATP hydrolysis activity; GO:0019899 enzyme binding; GO:0032137 guanine/thymine mispair binding; GO:0032407 MutSalpha complex binding; GO:0042393 histone binding; GO:0048316 seed development; GO:0060590 ATPase regulator activity; GO:0140801 histone H2AXY142 kinase activity
- KEGG
- EC: ec:2.3.1.48, ec:2.7.11.24 | KO: K08734 | Pathway: 03430 | BRITE: 00001, 03400
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPaHa08g12720.1
part_ofgenePaHa08g12720
