Hass · gene

PaHa08g12100

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,107
bp
8:37,310,143–37,321,197
genomic location
Record overview

Feature identity

Identifier
PaHa08g12100
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
1,107 bp
Genomic location
8:37,310,143–37,321,197
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC104598642 | Seed ortholog: 337451.A0A443PDS5 | COG: S | eggNOG OG: PK_Tyr_Ser-Thr@131567|CMc-25, PK_Tyr_Ser-Thr@3193|YTB-45, PK_Tyr_Ser-Thr@3398|wav-54
Gene Ontology
GO:0000287 magnesium ion binding; GO:0000785 chromatin; GO:0000902 cell morphogenesis; GO:0001558 regulation of cell growth; GO:0001568 blood vessel development; GO:0001658 branching involved in ureteric bud morphogenesis; GO:0001725 stress fiber; GO:0001885 endothelial cell development; GO:0001954 positive regulation of cell-matrix adhesion; GO:0003151 outflow tract morphogenesis; GO:0003211 cardiac ventricle formation; GO:0004672 protein kinase activity; GO:0004674 protein serine/threonine kinase activity; GO:0005178 integrin binding; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005813 centrosome; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0005911 cell-cell junction; GO:0005912 adherens junction; GO:0005925 focal adhesion; GO:0006468 protein phosphorylation; GO:0006469 negative regulation of protein kinase activity; GO:0007005 mitochondrion organization; GO:0007052 mitotic spindle organization; GO:0007160 cell-matrix adhesion; GO:0007229 integrin-mediated signaling pathway; GO:0007475 apposition of dorsal and ventral imaginal disc-derived wing surfaces; GO:0007507 heart development; GO:0008016 regulation of heart contraction; GO:0008284 positive regulation of cell population proliferation; GO:0008305 integrin complex; GO:0009792 embryo development ending in birth or egg hatching; GO:0009925 basal plasma membrane; GO:0009967 positive regulation of signal transduction; GO:0010667 negative regulation of cardiac muscle cell apoptotic process; GO:0010761 fibroblast migration; GO:0014044 Schwann cell development; GO:0014912 negative regulation of smooth muscle cell migration; GO:0015629 actin cytoskeleton; GO:0016203 muscle attachment; GO:0017124 SH3 domain binding; GO:0018105 peptidyl-serine phosphorylation; GO:0019901 protein kinase binding; GO:0019904 protein domain specific binding; GO:0021675 nerve development; GO:0022011 myelination in peripheral nervous system; GO:0030018 Z disc; GO:0030027 lamellipodium; GO:0030239 myofibril assembly; GO:0030335 positive regulation of cell migration; GO:0030424 axon; GO:0030513 positive regulation of BMP signaling pathway; GO:0030674 protein-macromolecule adaptor activity; GO:0031430 M band; GO:0032956 regulation of actin cytoskeleton organization; GO:0032991 protein-containing complex; GO:0033209 tumor necrosis factor-mediated signaling pathway; GO:0034446 substrate adhesion-dependent cell spreading; GO:0035989 tendon development; GO:0040017 positive regulation of locomotion; GO:0042383 sarcolemma; GO:0043025 neuronal cell body; GO:0043034 costamere; GO:0043066 negative regulation of apoptotic process; GO:0043123 positive regulation of canonical NF-kappaB signal transduction; GO:0043195 terminal bouton; GO:0043198 dendritic shaft; GO:0043406 positive regulation of MAP kinase activity; GO:0043410 positive regulation of MAPK cascade; GO:0043491 phosphatidylinositol 3-kinase/protein kinase B signal transduction; GO:0043524 negative regulation of neuron apoptotic process; GO:0044877 protein-containing complex binding; GO:0045197 establishment or maintenance of epithelial cell apical/basal polarity; GO:0045663 positive regulation of myoblast differentiation; GO:0045669 positive regulation of osteoblast differentiation; GO:0045773 positive regulation of axon extension; GO:0045893 positive regulation of DNA-templated transcription; GO:0046716 muscle cell cellular homeostasis; GO:0048662 negative regulation of smooth muscle cell proliferation; GO:0048812 neuron projection morphogenesis; GO:0050772 positive regulation of axonogenesis; GO:0050775 positive regulation of dendrite morphogenesis; GO:0051017 actin filament bundle assembly; GO:0051639 actin filament network formation; GO:0051897 positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction; GO:0055002 striated muscle cell development; GO:0055013 cardiac muscle cell development; GO:0055120 striated muscle dense body; GO:0060047 heart contraction; GO:0060298 positive regulation of sarcomere organization; GO:0070836 caveola assembly; GO:0072697 protein localization to cell cortex; GO:0090263 positive regulation of canonical Wnt signaling pathway; GO:0097435 supramolecular fiber organization; GO:0160175 somatic muscle attachment to chitin-based cuticle; GO:1900026 positive regulation of substrate adhesion-dependent cell spreading; GO:1903829 positive regulation of protein localization; GO:1904901 positive regulation of myosin II filament organization; GO:1904951 positive regulation of establishment of protein localization; GO:2000178 negative regulation of neural precursor cell proliferation; GO:2000774 positive regulation of cellular senescence
KEGG
EC: ec:1.11.1.7, ec:2.7.11.1 | KO: K06272, K19511 | Pathway: 03320, 04360, 04510, 05100, 05213 | BRITE: 00001, 01000, 01001, 03036
Biological context

Connected feature records

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