Feature identity
- Identifier
- PaHa08g10540
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 459 bp
- Genomic location
- 8:23,764,470–23,774,163
- Strand
- +
Hass · gene
PaHa08g10540
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 459
- bp
- 8:23,764,470–23,774,163
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC106773956 | Seed ortholog: 3914.A0A0L9T9F5 | COG: S | eggNOG OG: AAA@131567|Afu-19, AAA@163735|Awyi-70, AAA@2231393|AsUH-67, AAA@2759|NSS-33, AAA_lid_3@131567|DL-10, AAA_lid_3@163735|fKU-61, AAA_lid_3@2759|Xo-16, AAA_lid_3@3398|PoJ-42, Prot_ATP_ID_OB@131567|A-1, Prot_ATP_ID_OB@163735|FPX-58, Prot_ATP_ID_OB@2759|Ae-8
- Gene Ontology
- GO:0000502 proteasome complex; GO:0003712 transcription coregulator activity; GO:0005102 signaling receptor binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006511 ubiquitin-dependent protein catabolic process; GO:0008134 transcription factor binding; GO:0008540 proteasome regulatory particle, base subcomplex; GO:0009536 plastid; GO:0016887 ATP hydrolysis activity; GO:0017025 TBP-class protein binding; GO:0019904 protein domain specific binding; GO:0031531 thyrotropin-releasing hormone receptor binding; GO:0031625 ubiquitin protein ligase binding; GO:0036402 proteasome-activating activity; GO:0140296 general transcription initiation factor binding; GO:0140297 DNA-binding transcription factor binding
- KEGG
- KO: K03066 | Pathway: 03050 | BRITE: 00001, 03051
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPaHa08g10540.1
part_ofgenePaHa08g10540
