Feature identity
- Identifier
- PaHa03g19160.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,184 bp
- Genomic location
- 3:59,705,487–59,723,885
- Strand
- +
Hass · mRNA
PaHa03g19160.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,184
- bp
- 3:59,705,487–59,723,885
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g19160
- eggNOG
- Preferred name: LOC101258102 | Seed ortholog: 337451.A0A3S3MX32 | COG: COG1250 | eggNOG OG: 3HCDH@131567|LT-12, 3HCDH@35493|BGn-21, 3HCDH_N@131567|GO-11, 3HCDH_N@3398|Bdi-24, 3HCDH_N@35493|AgY-21, ECH_1@131567|Bgt-21, ECH_1@3398|UPD-34, ECH_1@35493|MUt-30
- Gene Ontology
- GO:0003857 (3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity; GO:0004165 delta(3)-delta(2)-enoyl-CoA isomerase activity; GO:0004300 enoyl-CoA hydratase activity; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005777 peroxisome; GO:0005829 cytosol; GO:0006635 fatty acid beta-oxidation; GO:0008692 3-hydroxybutyryl-CoA epimerase activity; GO:0009505 plant-type cell wall; GO:0009506 plasmodesma; GO:0009514 glyoxysome; GO:0018812 3-hydroxyacyl-CoA dehydratase activity
- KEGG
- EC: ec:1.1.1.211, ec:1.1.1.35, ec:4.2.1.17 | KO: K10527 | Pathway: 00071, 00592, 01100, 01110, 01212 | Module: M00087, M00113 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g19160.1-protein
derives_frommRNAPaHa03g19160.1
mRNAPaHa03g19160.1
part_ofgenePaHa03g19160
CDS
part_ofPaHa03g19160.1-CDS-3-1787993825:59705487..59705589mRNAPaHa03g19160.1
CDS
part_ofPaHa03g19160.1-CDS-3-1787993825:59707492..59707563mRNAPaHa03g19160.1
CDS
part_ofPaHa03g19160.1-CDS-3-1787993825:59707668..59707739mRNAPaHa03g19160.1
CDS
part_ofPaHa03g19160.1-CDS-3-1787993825:59707817..59707873mRNAPaHa03g19160.1
CDS
part_ofPaHa03g19160.1-CDS-3-1787993825:59708161..59708228mRNAPaHa03g19160.1
CDS
part_ofPaHa03g19160.1-CDS-3-1787993825:59708327..59708408mRNAPaHa03g19160.1
CDS
part_ofPaHa03g19160.1-CDS-3-1787993825:59710722..59710777mRNAPaHa03g19160.1
CDS
part_ofPaHa03g19160.1-CDS-3-1787993825:59711081..59711383mRNAPaHa03g19160.1
CDS
part_ofPaHa03g19160.1-CDS-3-1787993825:59711461..59711547mRNAPaHa03g19160.1
CDS
part_ofPaHa03g19160.1-CDS-3-1787993825:59716167..59716341mRNAPaHa03g19160.1
CDS
part_ofPaHa03g19160.1-CDS-3-1787993825:59716470..59716591mRNAPaHa03g19160.1
CDS
part_ofPaHa03g19160.1-CDS-3-1787993825:59717150..59717313mRNAPaHa03g19160.1
CDS
part_ofPaHa03g19160.1-CDS-3-1787993825:59717418..59717672mRNAPaHa03g19160.1
CDS
part_ofPaHa03g19160.1-CDS-3-1787993825:59718363..59718484mRNAPaHa03g19160.1
CDS
part_ofPaHa03g19160.1-CDS-3-1787993825:59718657..59718778mRNAPaHa03g19160.1
CDS
part_ofPaHa03g19160.1-CDS-3-1787993825:59722939..59723087mRNAPaHa03g19160.1
CDS
part_ofPaHa03g19160.1-CDS-3-1787993825:59723210..59723348mRNAPaHa03g19160.1
CDS
part_ofPaHa03g19160.1-CDS-3-1787993825:59723850..59723885mRNAPaHa03g19160.1
exon
part_ofPaHa03g19160.1-exon-3-1787993825:59705487..59705589mRNAPaHa03g19160.1
exon
part_ofPaHa03g19160.1-exon-3-1787993825:59707492..59707563mRNAPaHa03g19160.1
exon
part_ofPaHa03g19160.1-exon-3-1787993825:59707668..59707739mRNAPaHa03g19160.1
exon
part_ofPaHa03g19160.1-exon-3-1787993825:59707817..59707873mRNAPaHa03g19160.1
exon
part_ofPaHa03g19160.1-exon-3-1787993825:59708161..59708228mRNAPaHa03g19160.1
exon
part_ofPaHa03g19160.1-exon-3-1787993825:59708327..59708408mRNAPaHa03g19160.1
exon
part_ofPaHa03g19160.1-exon-3-1787993825:59710722..59710777mRNAPaHa03g19160.1
exon
part_ofPaHa03g19160.1-exon-3-1787993825:59711081..59711383mRNAPaHa03g19160.1
exon
part_ofPaHa03g19160.1-exon-3-1787993825:59711461..59711547mRNAPaHa03g19160.1
exon
part_ofPaHa03g19160.1-exon-3-1787993825:59716167..59716341mRNAPaHa03g19160.1
exon
part_ofPaHa03g19160.1-exon-3-1787993825:59716470..59716591mRNAPaHa03g19160.1
exon
part_ofPaHa03g19160.1-exon-3-1787993825:59717150..59717313mRNAPaHa03g19160.1
exon
part_ofPaHa03g19160.1-exon-3-1787993825:59717418..59717672mRNAPaHa03g19160.1
exon
part_ofPaHa03g19160.1-exon-3-1787993825:59718363..59718484mRNAPaHa03g19160.1
exon
part_ofPaHa03g19160.1-exon-3-1787993825:59718657..59718778mRNAPaHa03g19160.1
exon
part_ofPaHa03g19160.1-exon-3-1787993825:59722939..59723087mRNAPaHa03g19160.1
exon
part_ofPaHa03g19160.1-exon-3-1787993825:59723210..59723348mRNAPaHa03g19160.1
exon
part_ofPaHa03g19160.1-exon-3-1787993825:59723850..59723885mRNAPaHa03g19160.1
