Hass · gene

PaHa07g24690

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,956
bp
7:70,498,004–70,500,089
genomic location
Record overview

Feature identity

Identifier
PaHa07g24690
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
1,956 bp
Genomic location
7:70,498,004–70,500,089
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC104613306 | Seed ortholog: 337451.A0A443P428 | COG: S | eggNOG OG: PB1@131567|A-1*, PB1@1437183|Ccx-31, PB1@2759|DZ-11, PB1@3398|BqK-29, PB1@58023|AbO-25
Gene Ontology
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005886 plasma membrane; GO:0006468 protein phosphorylation; GO:0007165 signal transduction; GO:0007420 brain development; GO:0007507 heart development; GO:0010608 post-transcriptional regulation of gene expression; GO:0012505 endomembrane system; GO:0030307 positive regulation of cell growth; GO:0032717 negative regulation of interleukin-8 production; GO:0034115 negative regulation of heterotypic cell-cell adhesion; GO:0034392 negative regulation of smooth muscle cell apoptotic process; GO:0042802 identical protein binding; GO:0042803 protein homodimerization activity; GO:0043124 negative regulation of canonical NF-kappaB signal transduction; GO:0043229 intracellular organelle; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0048009 insulin-like growth factor receptor signaling pathway; GO:0050679 positive regulation of epithelial cell proliferation; GO:0051247 positive regulation of protein metabolic process; GO:0060761 negative regulation of response to cytokine stimulus; GO:0070375 ERK5 cascade; GO:0071363 cellular response to growth factor stimulus; GO:0071499 cellular response to laminar fluid shear stress; GO:0090051 negative regulation of cell migration involved in sprouting angiogenesis; GO:2000342 negative regulation of chemokine (C-X-C motif) ligand 2 production; GO:2001240 negative regulation of extrinsic apoptotic signaling pathway in absence of ligand
KEGG
EC: ec:2.7.12.2 | KO: K04463, K14381, K17987 | Pathway: 04010, 04137, 04140, 04540, 04722, 04921, 05418 | BRITE: 00001, 01000, 01001, 03029, 04131, 04147
Biological context

Connected feature records

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