Feature identity
- Identifier
- PaHa03g16790.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,715 bp
- Genomic location
- 3:53,409,081–53,418,607
- Strand
- −
Hass · mRNA
PaHa03g16790.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,715
- bp
- 3:53,409,081–53,418,607
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g16790
- eggNOG
- Preferred name: LOC108983431 | Seed ortholog: 337451.A0A443NCS0 | COG: S | eggNOG OG: Myb_DNA-bind_7@2759|A-1
- Gene Ontology
- GO:0000995 RNA polymerase III general transcription initiation factor activity; GO:0001006 RNA polymerase III type 3 promoter sequence-specific DNA binding; GO:0001112 DNA-templated transcription open complex formation; GO:0001156 TFIIIC-class transcription factor complex binding; GO:0003677 DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006383 transcription by RNA polymerase III; GO:0006384 transcription initiation at RNA polymerase III promoter; GO:0008150 biological_process; GO:0045945 positive regulation of transcription by RNA polymerase III; GO:0070898 RNA polymerase III preinitiation complex assembly
- KEGG
- EC: ec:5.2.1.8 | KO: K15198 | BRITE: 00001, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g16790.1-protein
derives_frommRNAPaHa03g16790.1
mRNAPaHa03g16790.1
part_ofgenePaHa03g16790
CDS
part_ofPaHa03g16790.1-CDS-3-1787993825:53409081..53409254mRNAPaHa03g16790.1
CDS
part_ofPaHa03g16790.1-CDS-3-1787993825:53410537..53410640mRNAPaHa03g16790.1
CDS
part_ofPaHa03g16790.1-CDS-3-1787993825:53411248..53411392mRNAPaHa03g16790.1
CDS
part_ofPaHa03g16790.1-CDS-3-1787993825:53412002..53412197mRNAPaHa03g16790.1
CDS
part_ofPaHa03g16790.1-CDS-3-1787993825:53414865..53414908mRNAPaHa03g16790.1
CDS
part_ofPaHa03g16790.1-CDS-3-1787993825:53415072..53415172mRNAPaHa03g16790.1
CDS
part_ofPaHa03g16790.1-CDS-3-1787993825:53415270..53415669mRNAPaHa03g16790.1
CDS
part_ofPaHa03g16790.1-CDS-3-1787993825:53415797..53415933mRNAPaHa03g16790.1
CDS
part_ofPaHa03g16790.1-CDS-3-1787993825:53416347..53416410mRNAPaHa03g16790.1
CDS
part_ofPaHa03g16790.1-CDS-3-1787993825:53416513..53416907mRNAPaHa03g16790.1
CDS
part_ofPaHa03g16790.1-CDS-3-1787993825:53416985..53417051mRNAPaHa03g16790.1
CDS
part_ofPaHa03g16790.1-CDS-3-1787993825:53417158..53417296mRNAPaHa03g16790.1
CDS
part_ofPaHa03g16790.1-CDS-3-1787993825:53417421..53417556mRNAPaHa03g16790.1
CDS
part_ofPaHa03g16790.1-CDS-3-1787993825:53417633..53417696mRNAPaHa03g16790.1
CDS
part_ofPaHa03g16790.1-CDS-3-1787993825:53417771..53417823mRNAPaHa03g16790.1
CDS
part_ofPaHa03g16790.1-CDS-3-1787993825:53417962..53418171mRNAPaHa03g16790.1
CDS
part_ofPaHa03g16790.1-CDS-3-1787993825:53418250..53418316mRNAPaHa03g16790.1
CDS
part_ofPaHa03g16790.1-CDS-3-1787993825:53418389..53418607mRNAPaHa03g16790.1
exon
part_ofPaHa03g16790.1-exon-3-1787993825:53409081..53409254mRNAPaHa03g16790.1
exon
part_ofPaHa03g16790.1-exon-3-1787993825:53410537..53410640mRNAPaHa03g16790.1
exon
part_ofPaHa03g16790.1-exon-3-1787993825:53411248..53411392mRNAPaHa03g16790.1
exon
part_ofPaHa03g16790.1-exon-3-1787993825:53412002..53412197mRNAPaHa03g16790.1
exon
part_ofPaHa03g16790.1-exon-3-1787993825:53414865..53414908mRNAPaHa03g16790.1
exon
part_ofPaHa03g16790.1-exon-3-1787993825:53415072..53415172mRNAPaHa03g16790.1
exon
part_ofPaHa03g16790.1-exon-3-1787993825:53415270..53415669mRNAPaHa03g16790.1
exon
part_ofPaHa03g16790.1-exon-3-1787993825:53415797..53415933mRNAPaHa03g16790.1
exon
part_ofPaHa03g16790.1-exon-3-1787993825:53416347..53416410mRNAPaHa03g16790.1
exon
part_ofPaHa03g16790.1-exon-3-1787993825:53416513..53416907mRNAPaHa03g16790.1
exon
part_ofPaHa03g16790.1-exon-3-1787993825:53416985..53417051mRNAPaHa03g16790.1
exon
part_ofPaHa03g16790.1-exon-3-1787993825:53417158..53417296mRNAPaHa03g16790.1
exon
part_ofPaHa03g16790.1-exon-3-1787993825:53417421..53417556mRNAPaHa03g16790.1
exon
part_ofPaHa03g16790.1-exon-3-1787993825:53417633..53417696mRNAPaHa03g16790.1
exon
part_ofPaHa03g16790.1-exon-3-1787993825:53417771..53417823mRNAPaHa03g16790.1
exon
part_ofPaHa03g16790.1-exon-3-1787993825:53417962..53418171mRNAPaHa03g16790.1
exon
part_ofPaHa03g16790.1-exon-3-1787993825:53418250..53418316mRNAPaHa03g16790.1
exon
part_ofPaHa03g16790.1-exon-3-1787993825:53418389..53418607mRNAPaHa03g16790.1
