Feature identity
- Identifier
- PaHa03g15530.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,104 bp
- Genomic location
- 3:48,180,190–48,193,258
- Strand
- +
Hass · mRNA
PaHa03g15530.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,104
- bp
- 3:48,180,190–48,193,258
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g15530
- eggNOG
- Preferred name: LPXC1 | Seed ortholog: 337451.A0A3S3MAL2 | COG: COG0774 | eggNOG OG: LpxC@131567|A-1
- Gene Ontology
- GO:0005739 mitochondrion; GO:0009507 chloroplast; GO:0103117 UDP-3-O-acyl-N-acetylglucosamine deacetylase activity; GO:2001289 lipid X metabolic process
- KEGG
- EC: ec:3.5.1.108 | KO: K02535 | Pathway: 01100 | Module: M00060, M00866 | BRITE: 00001, 01000, 01005
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g15530.1-protein
derives_frommRNAPaHa03g15530.1
mRNAPaHa03g15530.1
part_ofgenePaHa03g15530
CDS
part_ofPaHa03g15530.1-CDS-3-1787993825:48180190..48180267mRNAPaHa03g15530.1
CDS
part_ofPaHa03g15530.1-CDS-3-1787993825:48180418..48180741mRNAPaHa03g15530.1
CDS
part_ofPaHa03g15530.1-CDS-3-1787993825:48182315..48182521mRNAPaHa03g15530.1
CDS
part_ofPaHa03g15530.1-CDS-3-1787993825:48189383..48189484mRNAPaHa03g15530.1
CDS
part_ofPaHa03g15530.1-CDS-3-1787993825:48190124..48190188mRNAPaHa03g15530.1
CDS
part_ofPaHa03g15530.1-CDS-3-1787993825:48190640..48190784mRNAPaHa03g15530.1
CDS
part_ofPaHa03g15530.1-CDS-3-1787993825:48191817..48191843mRNAPaHa03g15530.1
CDS
part_ofPaHa03g15530.1-CDS-3-1787993825:48191931..48191978mRNAPaHa03g15530.1
CDS
part_ofPaHa03g15530.1-CDS-3-1787993825:48192153..48192181mRNAPaHa03g15530.1
CDS
part_ofPaHa03g15530.1-CDS-3-1787993825:48192262..48192303mRNAPaHa03g15530.1
CDS
part_ofPaHa03g15530.1-CDS-3-1787993825:48193222..48193258mRNAPaHa03g15530.1
exon
part_ofPaHa03g15530.1-exon-3-1787993825:48180190..48180267mRNAPaHa03g15530.1
exon
part_ofPaHa03g15530.1-exon-3-1787993825:48180418..48180741mRNAPaHa03g15530.1
exon
part_ofPaHa03g15530.1-exon-3-1787993825:48182315..48182521mRNAPaHa03g15530.1
exon
part_ofPaHa03g15530.1-exon-3-1787993825:48189383..48189484mRNAPaHa03g15530.1
exon
part_ofPaHa03g15530.1-exon-3-1787993825:48190124..48190188mRNAPaHa03g15530.1
exon
part_ofPaHa03g15530.1-exon-3-1787993825:48190640..48190784mRNAPaHa03g15530.1
exon
part_ofPaHa03g15530.1-exon-3-1787993825:48191817..48191843mRNAPaHa03g15530.1
exon
part_ofPaHa03g15530.1-exon-3-1787993825:48191931..48191978mRNAPaHa03g15530.1
exon
part_ofPaHa03g15530.1-exon-3-1787993825:48192153..48192181mRNAPaHa03g15530.1
exon
part_ofPaHa03g15530.1-exon-3-1787993825:48192262..48192303mRNAPaHa03g15530.1
exon
part_ofPaHa03g15530.1-exon-3-1787993825:48193222..48193258mRNAPaHa03g15530.1
