Feature identity
- Identifier
- PaHa06g19380
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,074 bp
- Genomic location
- 6:50,813,416–50,833,128
- Strand
- +
Hass · gene
PaHa06g19380
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,074
- bp
- 6:50,813,416–50,833,128
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC110792541 | Seed ortholog: 337451.A0A3S3PDR3 | COG: COG3568 | eggNOG OG: Exo_endo_phos@131567|C-2!, Exo_endo_phos@3193|AHA-21
- Gene Ontology
- GO:0000287 magnesium ion binding; GO:0003677 DNA binding; GO:0003697 single-stranded DNA binding; GO:0003714 transcription corepressor activity; GO:0004519 endonuclease activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0006302 double-strand break repair; GO:0007166 cell surface receptor signaling pathway; GO:0007368 determination of left/right symmetry; GO:0007369 gastrulation; GO:0008081 phosphoric diester hydrolase activity; GO:0016235 aggresome; GO:0016604 nuclear body; GO:0016605 PML body; GO:0030145 manganese ion binding; GO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway; GO:0036317 tyrosyl-RNA phosphodiesterase activity; GO:0042802 identical protein binding; GO:0048666 neuron development; GO:0060027 convergent extension involved in gastrulation; GO:0070259 tyrosyl-DNA phosphodiesterase activity; GO:0070260 5'-tyrosyl-DNA phosphodiesterase activity
- KEGG
- EC: ec:3.2.1.39 | KO: K19619, K19891 | Pathway: 00500, 01100 | BRITE: 00001, 00537, 01000, 03400
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPaHa06g19380.1
part_ofgenePaHa06g19380
