Feature identity
- Identifier
- PaHa03g13620.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 978 bp
- Genomic location
- 3:34,830,834–34,839,784
- Strand
- −
Hass · mRNA
PaHa03g13620.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 978
- bp
- 3:34,830,834–34,839,784
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g13620
- eggNOG
- Preferred name: LOC109726863 | Seed ortholog: 337451.A0A3S3NB81 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@3193|KI-15, AP2@33090|Hp-14, AP2@3398|je-20, AP2@58023|Vz-18
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0001666 response to hypoxia; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005886 plasma membrane; GO:0009620 response to fungus; GO:0010468 regulation of gene expression; GO:0070483 detection of hypoxia; GO:2000280 regulation of root development
- KEGG
- KO: K09286 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g13620.1-protein
derives_frommRNAPaHa03g13620.1
mRNAPaHa03g13620.1
part_ofgenePaHa03g13620
CDS
part_ofPaHa03g13620.1-CDS-3-1787993825:34830834..34831555mRNAPaHa03g13620.1
CDS
part_ofPaHa03g13620.1-CDS-3-1787993825:34839529..34839784mRNAPaHa03g13620.1
exon
part_ofPaHa03g13620.1-exon-3-1787993825:34830834..34831555mRNAPaHa03g13620.1
exon
part_ofPaHa03g13620.1-exon-3-1787993825:34839529..34839784mRNAPaHa03g13620.1
