Feature identity
- Identifier
- PaHa05g17940
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 714 bp
- Genomic location
- 5:56,414,634–56,420,958
- Strand
- −
Hass · gene
PaHa05g17940
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 714
- bp
- 5:56,414,634–56,420,958
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: HY5 | Seed ortholog: 56857.A0A200PQK6 | COG: S | eggNOG OG: bZIP_1@131221|COW-31, bZIP_1@131567|XL-17, bZIP_1@2759|is-20
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003690 double-stranded DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0009640 photomorphogenesis; GO:0009737 response to abscisic acid; GO:0009740 gibberellic acid mediated signaling pathway; GO:0009787 regulation of abscisic acid-activated signaling pathway; GO:0009958 positive gravitropism; GO:0009963 positive regulation of flavonoid biosynthetic process; GO:0010017 red or far-red light signaling pathway; GO:0010099 regulation of photomorphogenesis; GO:0010114 response to red light; GO:0010218 response to far red light; GO:0010224 response to UV-B; GO:0031539 positive regulation of anthocyanin metabolic process; GO:0032993 protein-DNA complex; GO:0042753 positive regulation of circadian rhythm
- KEGG
- KO: K16241 | Pathway: 04712 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPaHa05g17940.1
part_ofgenePaHa05g17940
