Feature identity
- Identifier
- PaHa03g09640.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,104 bp
- Genomic location
- 3:18,997,822–19,011,113
- Strand
- +
Hass · mRNA
PaHa03g09640.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,104
- bp
- 3:18,997,822–19,011,113
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g09640
- eggNOG
- Preferred name: HMGCL | Seed ortholog: 337451.A0A3S3PYL9 | COG: COG0119 | eggNOG OG: HMGL-like@131567|GB-14, HMGL-like@58023|Qtu-41
- Gene Ontology
- GO:0001889 liver development; GO:0004419 hydroxymethylglutaryl-CoA lyase activity; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0006552 L-leucine catabolic process; GO:0006629 lipid metabolic process; GO:0006637 acyl-CoA metabolic process; GO:0007005 mitochondrion organization; GO:0007584 response to nutrient; GO:0009507 chloroplast; GO:0042181 ketone biosynthetic process; GO:0042594 response to starvation; GO:0046872 metal ion binding; GO:0046951 ketone body biosynthetic process; GO:0070542 response to fatty acid
- KEGG
- EC: ec:4.1.3.4 | KO: K01640 | Pathway: 00280, 00650, 01100, 04146 | Module: M00036, M00088 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g09640.1-protein
derives_frommRNAPaHa03g09640.1
mRNAPaHa03g09640.1
part_ofgenePaHa03g09640
CDS
part_ofPaHa03g09640.1-CDS-3-1787993825:18997822..18997938mRNAPaHa03g09640.1
CDS
part_ofPaHa03g09640.1-CDS-3-1787993825:18998025..18998257mRNAPaHa03g09640.1
CDS
part_ofPaHa03g09640.1-CDS-3-1787993825:18998343..18998413mRNAPaHa03g09640.1
CDS
part_ofPaHa03g09640.1-CDS-3-1787993825:18998552..18998687mRNAPaHa03g09640.1
CDS
part_ofPaHa03g09640.1-CDS-3-1787993825:18999341..18999376mRNAPaHa03g09640.1
CDS
part_ofPaHa03g09640.1-CDS-3-1787993825:19000631..19000747mRNAPaHa03g09640.1
CDS
part_ofPaHa03g09640.1-CDS-3-1787993825:19009717..19009912mRNAPaHa03g09640.1
CDS
part_ofPaHa03g09640.1-CDS-3-1787993825:19010916..19011113mRNAPaHa03g09640.1
exon
part_ofPaHa03g09640.1-exon-3-1787993825:18997822..18997938mRNAPaHa03g09640.1
exon
part_ofPaHa03g09640.1-exon-3-1787993825:18998025..18998257mRNAPaHa03g09640.1
exon
part_ofPaHa03g09640.1-exon-3-1787993825:18998343..18998413mRNAPaHa03g09640.1
exon
part_ofPaHa03g09640.1-exon-3-1787993825:18998552..18998687mRNAPaHa03g09640.1
exon
part_ofPaHa03g09640.1-exon-3-1787993825:18999341..18999376mRNAPaHa03g09640.1
exon
part_ofPaHa03g09640.1-exon-3-1787993825:19000631..19000747mRNAPaHa03g09640.1
exon
part_ofPaHa03g09640.1-exon-3-1787993825:19009717..19009912mRNAPaHa03g09640.1
exon
part_ofPaHa03g09640.1-exon-3-1787993825:19010916..19011113mRNAPaHa03g09640.1
