Feature identity
- Identifier
- PaHa03g09310.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,127 bp
- Genomic location
- 3:18,311,999–18,333,771
- Strand
- +
Hass · mRNA
PaHa03g09310.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,127
- bp
- 3:18,311,999–18,333,771
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g09310
- eggNOG
- Preferred name: LOC104593558 | Seed ortholog: 337451.A0A443NBQ6 | COG: S | eggNOG OG: Beta-Casp@2759|B-2!, Lactamase_B_6@131567|B-2
- Gene Ontology
- GO:0003674 molecular_function; GO:0005634 nucleus; GO:0016180 snRNA processing; GO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway; GO:0030514 negative regulation of BMP signaling pathway; GO:0034243 regulation of transcription elongation by RNA polymerase II; GO:0034472 snRNA 3'-end processing; GO:0160240 RNA polymerase II transcription initiation surveillance
- KEGG
- KO: K13146 | BRITE: 00001, 03041
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g09310.1-protein
derives_frommRNAPaHa03g09310.1
mRNAPaHa03g09310.1
part_ofgenePaHa03g09310
CDS
part_ofPaHa03g09310.1-CDS-3-1787993825:18311999..18312007mRNAPaHa03g09310.1
CDS
part_ofPaHa03g09310.1-CDS-3-1787993825:18312091..18312477mRNAPaHa03g09310.1
CDS
part_ofPaHa03g09310.1-CDS-3-1787993825:18313619..18313833mRNAPaHa03g09310.1
CDS
part_ofPaHa03g09310.1-CDS-3-1787993825:18318489..18318845mRNAPaHa03g09310.1
CDS
part_ofPaHa03g09310.1-CDS-3-1787993825:18319138..18319348mRNAPaHa03g09310.1
CDS
part_ofPaHa03g09310.1-CDS-3-1787993825:18323911..18324003mRNAPaHa03g09310.1
CDS
part_ofPaHa03g09310.1-CDS-3-1787993825:18324098..18324189mRNAPaHa03g09310.1
CDS
part_ofPaHa03g09310.1-CDS-3-1787993825:18328609..18328726mRNAPaHa03g09310.1
CDS
part_ofPaHa03g09310.1-CDS-3-1787993825:18329216..18329301mRNAPaHa03g09310.1
CDS
part_ofPaHa03g09310.1-CDS-3-1787993825:18332749..18332800mRNAPaHa03g09310.1
CDS
part_ofPaHa03g09310.1-CDS-3-1787993825:18333265..18333771mRNAPaHa03g09310.1
exon
part_ofPaHa03g09310.1-exon-3-1787993825:18311999..18312007mRNAPaHa03g09310.1
exon
part_ofPaHa03g09310.1-exon-3-1787993825:18312091..18312477mRNAPaHa03g09310.1
exon
part_ofPaHa03g09310.1-exon-3-1787993825:18313619..18313833mRNAPaHa03g09310.1
exon
part_ofPaHa03g09310.1-exon-3-1787993825:18318489..18318845mRNAPaHa03g09310.1
exon
part_ofPaHa03g09310.1-exon-3-1787993825:18319138..18319348mRNAPaHa03g09310.1
exon
part_ofPaHa03g09310.1-exon-3-1787993825:18323911..18324003mRNAPaHa03g09310.1
exon
part_ofPaHa03g09310.1-exon-3-1787993825:18324098..18324189mRNAPaHa03g09310.1
exon
part_ofPaHa03g09310.1-exon-3-1787993825:18328609..18328726mRNAPaHa03g09310.1
exon
part_ofPaHa03g09310.1-exon-3-1787993825:18329216..18329301mRNAPaHa03g09310.1
exon
part_ofPaHa03g09310.1-exon-3-1787993825:18332749..18332800mRNAPaHa03g09310.1
exon
part_ofPaHa03g09310.1-exon-3-1787993825:18333265..18333771mRNAPaHa03g09310.1
