Feature identity
- Identifier
- PaHa03g08920.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 390 bp
- Genomic location
- 3:17,648,381–17,652,735
- Strand
- +
Hass · mRNA
PaHa03g08920.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 390
- bp
- 3:17,648,381–17,652,735
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g08920
- eggNOG
- Preferred name: MYBAS1 | Seed ortholog: 337451.A0A3S3Q1C7 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3398|JKX-42, Myb_DNA-binding@35493|EcW-37
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0035865 cellular response to potassium ion; GO:0043266 regulation of potassium ion transport; GO:0043565 sequence-specific DNA binding
- KEGG
- EC: ec:1.17.99.9 | KO: K09422 | Pathway: 00190, 00860, 01100, 01110, 01240, 04626 | Module: M00154 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g08920.1-protein
derives_frommRNAPaHa03g08920.1
mRNAPaHa03g08920.1
part_ofgenePaHa03g08920
CDS
part_ofPaHa03g08920.1-CDS-3-1787993825:17648381..17648462mRNAPaHa03g08920.1
CDS
part_ofPaHa03g08920.1-CDS-3-1787993825:17652428..17652735mRNAPaHa03g08920.1
exon
part_ofPaHa03g08920.1-exon-3-1787993825:17648381..17648462mRNAPaHa03g08920.1
exon
part_ofPaHa03g08920.1-exon-3-1787993825:17652428..17652735mRNAPaHa03g08920.1
