Functional Annotation Search

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Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046: West Indian T2T annotations
3+: indexed evidence types

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2,385 genes for “transcription factor”

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Select	Gene	Matched annotation	Evidence	Actions
Select Pa10g1466	Pa10g1466`Pa10g1466.1`	…GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0009555 \| GO:0010152 \| GO:0080092 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| pollen development \| pollen maturation \| regulation of pollen tube growth Show annotation evidence eggNOG Preferred name: LOC123094739 \| Seed ortholog: 337451.A0A443PT27 \| COG: S \| eggNOG OG: SRF-TF@131567\|A-1*, SRF-TF@1437183\|CEp-29, SRF-TF@2759\|C-2!, SRF-TF@3398\|AOO-23, SRF-TF@58023\|ai-19 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009555 pollen development; GO:0010152 pollen maturation; GO:0080092 regulation of pollen tube growth KEGG KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 \| Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 \| BRITE: 00001, 03000, 03021, 04131	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1507	Pa10g1507`Pa10g1507.1`	…443 \| GO:0080086 \| GO:1990841 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| gibberellic acid mediated signaling pathway \| response to jasmonic acid \| jasmonic acid mediated signaling pathway \| stamen development \| stamen filam… Show annotation evidence eggNOG Preferred name: MYB305 \| Seed ortholog: 337451.A0A3S3NFB4 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3398\|GNp-39, Myb_DNA-binding@35493\|EcV-37 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009740 gibberellic acid mediated signaling pathway; GO:0009753 response to jasmonic acid; GO:0009867 jasmonic acid mediated signaling pathway; GO:0048443 stamen development; GO:0080086 stamen filament development; GO:1990841 promoter-specific chromatin... KEGG EC: ec:1.17.99.9 \| KO: K09422 \| Pathway: 00190, 00860, 01100, 01110, 01240, 04626 \| Module: M00154 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1510	Pa10g1510`Pa10g1510.1`	…087 \| GO:0045893 \| GO:0090057 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| procambium histogenesis \| phloem or xylem histogenesis \| positive regulation of DNA-templated transcription \| root radial pa… Show annotation evidence eggNOG Preferred name: DOF5.6 \| Seed ortholog: 337451.A0A3S3N7N6 \| COG: S \| eggNOG OG: zf-Dof@131567\|A-1*, zf-Dof@3193\|Bv-8, zf-Dof@33090\|d-5, zf-Dof@3398\|GP-11, zf-Dof@58023\|DA-9 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010067 procambium histogenesis; GO:0010087 phloem or xylem histogenesis; GO:0045893 positive regulation of DNA-templated transcription; GO:0090057 root radial pattern formation	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1531	Pa10g1531`Pa10g1531.1`	…ytosol \| plasma membrane \| nucleosome assembly \| chromatin remodeling \| immune response \| transcription factor binding \| biological_process \| aerobic respiration \| RNA modification \| cell surface \| membrane \| regulation of complement activation \| kininogen binding \| adrenergic receptor binding \| neg… Show annotation evidence eggNOG Preferred name: LOC106764071 \| Seed ortholog: 337451.A0A3S4PRN7 \| COG: S \| eggNOG OG: MAM33@1437183\|Jw-17, MAM33@2759\|A-1, MAM33@3398\|FC-14 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000957 mitochondrial RNA catabolic process; GO:0001849 complement component C1q complex binding; GO:0003674 molecular_function; GO:0003714 transcription corepressor activity; GO:0003729 mRNA binding; GO:0004857 enzyme inhibitor activity; GO:0005080 protein kinase C binding; GO:0005515 protein binding; GO:0005540 hyaluronic acid binding; GO... KEGG EC: ec:5.6.2.7 \| KO: K15414 \| Pathway: 03013, 03015, 03040 \| BRITE: 00001, 00536	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1564	Pa10g1564`Pa10g1564.1`	…ption cis-regulatory region binding \| cell fate specification \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| gibberellic acid mediated signaling pathway \| unidimensional cell growth \| jasmonic acid mediated signalin… Show annotation evidence eggNOG Preferred name: BnaCnng52970D \| Seed ortholog: 337451.A0A3S3PML3 \| COG: S \| eggNOG OG: Myb_DNA-binding@131221\|IJn-41, Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@1437183\|PQF-47, Myb_DNA-binding@33090\|DqE-36, Myb_DNA-binding@35493\|GOK-39 GO GO:0000976 transcription cis-regulatory region binding; GO:0001708 cell fate specification; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009740 gibberellic acid mediated signaling pathway; GO:0009826 unidimensional cell growth; GO:0009867 jasmonic acid mediated signaling... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1579	Pa10g1579`Pa10g1579.1`	Pa10g1579 \| Pa10g1579.1 \| ABCG21 \| 337451.A0A443PT74 \| ABC2_membrane@131567\|O-4 \| ABC2_membrane@2759\|AfM-19 \| ABC2_membrane@33090\|Idp-30 \| ABC2_membrane@3398\|Jjy-31 \| ABC2_membrane_7@131567\|C-2 \| ABC2_membrane_7@2759\|Iz-13 \| ABC2_membrane_7@3193\|sc-21 \|... Show annotation evidence eggNOG Preferred name: ABCG21 \| Seed ortholog: 337451.A0A443PT74 \| COG: COG1716 \| eggNOG OG: ABC2_membrane@131567\|O-4, ABC2_membrane@2759\|AfM-19, ABC2_membrane@33090\|Idp-30, ABC2_membrane@3398\|Jjy-31, ABC2_membrane_7@131567\|C-2, ABC2_membrane_7@2759\|Iz-13, ABC2_membrane_7@3193\|sc-21, ABC2_membrane_7@3398\|AkF-25, ABC_tran\|BE9WZE@2759, ABC_tran\|BE9WZE@3398, ABC_tran\|BE9WZE@35493 GO GO:0000082 G1/S transition of mitotic cell cycle; GO:0000266 mitochondrial fission; GO:0001525 angiogenesis; GO:0001570 vasculogenesis; GO:0001666 response to hypoxia; GO:0001708 cell fate specification; GO:0001894 tissue homeostasis; GO:0002248 connective tissue replacement involved in inflammatory response wound healing; GO:0003007 heart morphogenesis; GO:0003231 cardiac ventricle development; GO:0003248 heart... KEGG KO: K05681 \| Pathway: 02010 \| BRITE: 00001, 02000, 04090, 04147	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1581	Pa10g1581`Pa10g1581.1`	…515 \| GO:0005634 \| GO:0006355 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: LOC103719785 \| Seed ortholog: 337451.A0A3S3R1S2 \| COG: COG2036 \| eggNOG OG: CBFD_NFYB_HMF@131567\|BS-10, CBFD_NFYB_HMF@2759\|IE-16 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription KEGG KO: K21751 \| BRITE: 00001, 03021, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1616	Pa10g1616`Pa10g1616.1`	…634 \| GO:0005737 \| GO:0006355 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| cytoplasm \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: LOC107961028 \| Seed ortholog: 337451.A0A3S3R3S3 \| COG: S \| eggNOG OG: zf-CCCH@131567\|Abn-26, zf-CCCH@1437183\|HAe-42, zf-CCCH@58023\|GYX-41 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription KEGG KO: K18753 \| BRITE: 00001, 03019	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1629	Pa10g1629`Pa10g1629.1`	…BBY_13_144 \| GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0009944 \| GO:0048481 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| polarity specification of adaxial/abaxial axis \| plant ovule development Show annotation evidence eggNOG Preferred name: LOC104591412 \| Seed ortholog: 337451.A0A3S3N1H8 \| COG: S \| eggNOG OG: YABBY@2759\|C-2!, YABBY@3398\|Av-9 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009944 polarity specification of adaxial/abaxial axis; GO:0048481 plant ovule development KEGG KO: K25796 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1633	Pa10g1633`Pa10g1633.1`	Pa10g1633 \| Pa10g1633.1 \| LOC123123543 \| 337451.A0A443PTB6 \| MTS@131567\|CF-8 \| COG2890 \| ec:2.1.1.297 \| K19589 \| 00001 \| 01000 \| 03012 \| MTS_73_158 \| GO:0005515 \| GO:0005575 \| GO:0005634 \| GO:0005737 \| GO:0005829 \| GO:0005840 \| GO:0006417 \| GO:0008170 \| GO... Show annotation evidence eggNOG Preferred name: LOC123123543 \| Seed ortholog: 337451.A0A443PTB6 \| COG: COG2890 \| eggNOG OG: MTS@131567\|CF-8 GO GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005840 ribosome; GO:0006417 regulation of translation; GO:0008170 N-methyltransferase activity; GO:0008276 protein methyltransferase activity; GO:0008757 S-adenosylmethionine-dependent methyltransferase activity; GO:0009007 site-specific DNA-methyltransferase (adenine-specific) activity; GO... KEGG EC: ec:2.1.1.297 \| KO: K19589 \| BRITE: 00001, 01000, 03012	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1634	Pa10g1634`Pa10g1634.1`	…91 \| GO:0045697 \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| embryo sac development \| pollen tube guidance \| sequence-specific DNA binding \| regulation of embryo sac central cell differ… Show annotation evidence eggNOG Preferred name: MYB98 \| Seed ortholog: 337451.A0A443PJU4 \| eggNOG OG: Myb_DNA-binding@131567\|ACl-25 GO GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009553 embryo sac development; GO:0010183 pollen tube guidance; GO:0043565 sequence-specific DNA binding; GO:0045691 regulation of embryo sac central cell differentiation; GO:0045697 regulation of synergid... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1645	Pa10g1645`Pa10g1645.1`	…736 \| GO:0010073 \| GO:0010094 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytokinin-activated signaling pathway \| meristem maintenance \| specification of carpel identity Show annotation evidence eggNOG Preferred name: KNAT6 \| Seed ortholog: 337451.A0A3S3R1W3 \| COG: S \| eggNOG OG: ELK@131567\|A-1, ELK@33090\|C-2, ELK@3398\|x-7, Homeobox_KN@131567\|A-1, Homeobox_KN@2759\|B-2, Homeobox_KN@3193\|AW-8, Homeobox_KN@3398\|Gu-13, KNOX1@131567\|A-1, KNOX1@3193\|t-8, KNOX1@33090\|B-2, KNOX1@3398\|BV-11, KNOX2@131567\|A-1, KNOX2@3398\|AE-8, KNOX2@35493\|B-2 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009736 cytokinin-activated signaling pathway; GO:0010073 meristem maintenance; GO:0010094 specification of carpel identity	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1673	Pa10g1673`Pa10g1673.1`	Pa10g1673 \| Pa10g1673.1 \| OSJNBb0024A20.19 \| 42345.A0A2H3XIF4 \| KH_2@131567\|O-5 \| KH_2@1437183\|KPN-47 \| Ribosomal_S3_C@131567\|A-1 \| Ribosomal_S3_C@35493\|fr-21 \| S \| ec:2.3.1.16 \| K02985 \| 03010 \| M00087 \| M00113 \| M00861 \| 00001 \| 01610 \| 03011 \| KH_2_20_93... Show annotation evidence eggNOG Preferred name: OSJNBb0024A20.19 \| Seed ortholog: 42345.A0A2H3XIF4 \| COG: S \| eggNOG OG: KH_2@131567\|O-5, KH_2@1437183\|KPN-47, Ribosomal_S3_C@131567\|A-1, Ribosomal_S3_C@35493\|fr-21 GO GO:0000054 ribosomal subunit export from nucleus; GO:0000056 ribosomal small subunit export from nucleus; GO:0000278 mitotic cell cycle; GO:0000325 plant-type vacuole; GO:0002181 cytoplasmic translation; GO:0003729 mRNA binding; GO:0003735 structural constituent of ribosome; GO:0005730 nucleolus; GO:0005777 peroxisome; GO:0005829 cytosol; GO:0006281 DNA repair; GO:0006284 base-excision repair; GO:0006412... KEGG EC: ec:2.3.1.16 \| KO: K02985 \| Pathway: 03010 \| Module: M00087, M00113, M00861 \| BRITE: 00001, 01610, 03011	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1692	Pa10g1692`Pa10g1692.1`	…nsed chromosome \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| nucleolus \| cytosol \| regulation of DNA-templated transcription \| negative regulation of cell population proliferation \| asymmetric cell division \| re… Show annotation evidence eggNOG Preferred name: LOC104593107 \| Seed ortholog: 337451.A0A3S3R1Y7 \| COG: S \| eggNOG OG: Myb_DNA-binding@131221\|LYW-44, Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|NtY-46, Myb_DNA-binding@33090\|FSl-38, Myb_DNA-binding@35493\|IIv-41 GO GO:0000793 condensed chromosome; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0008356 asymmetric cell division; GO... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1724	Pa10g1724`Pa10g1724.1`	…C_N_13_191 \| GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0006355 \| GO:0010629 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| negative regulation of gene expression Show annotation evidence eggNOG Preferred name: PanBHLH104 \| Seed ortholog: 3750.A0A498JSY9 \| COG: S \| eggNOG OG: HLH@131567\|Zg-14!, HLH@3193\|EiP-29, HLH@33090\|AAF-17, HLH@3398\|HWL-32, HLH@35493\|Aps-20, bHLH-MYC_N@131567\|A-1*, bHLH-MYC_N@2759\|C-2, bHLH-MYC_N@3193\|AFV-24, bHLH-MYC_N@33090\|Y-5, bHLH-MYC_N@3398\|AMO-26 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010629 negative regulation of gene expression KEGG KO: K13422 \| Pathway: 04016, 04075 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1727	Pa10g1727`Pa10g1727.1`	…14 \| GO:0010218 \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| circadian rhythm \| response to light stimulus \| response to blue light \| response to red light \| response … Show annotation evidence eggNOG Preferred name: COL13 \| Seed ortholog: 337451.A0A443PTM6 \| COG: S \| eggNOG OG: CCT@131567\|A-1*, CCT@2759\|t-6, CCT@3193\|GZ-11, CCT@3398\|Iw-12, zf-B_box@2759\|B-2!, zf-B_box@3193\|BT-10, zf-B_box@3398\|CP-11, zf-B_box@35493\|AC-8 GO GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0009416 response to light stimulus; GO:0009637 response to blue light; GO:0010114 response to red light; GO:0010218 response to far red light KEGG KO: K12135 \| Pathway: 04712 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1753	Pa10g1753`Pa10g1753.1`	…893 \| GO:1901332 \| GO:2000032 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| flower development \| lateral root morphogenesis \| inflorescence development \| bract development \| floral meristem growth \| floral meristem determinacy… Show annotation evidence eggNOG Preferred name: ERF086 \| Seed ortholog: 337451.A0A3S3PMU5 \| eggNOG OG: AP2@131567\|DU-11, AP2@33090\|KL-15, AP2@3398\|kF-20, AP2@58023\|RX-17 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009908 flower development; GO:0010102 lateral root morphogenesis; GO:0010229 inflorescence development; GO:0010432 bract development; GO:0010451 floral meristem growth; GO:0010582 floral meristem determinacy; GO:0045893 positive regulation of DNA... KEGG KO: K13434 \| Pathway: 04626 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1759	Pa10g1759`Pa10g1759.1`	…ing \| RNA polymerase II cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription factor activity, RNA polymerase II-specific \| DNA-binding transcription repressor activity \| DNA-binding transcription activator activity, RNA polymerase II-specific \| DNA binding \| chromatin bind… Show annotation evidence eggNOG Preferred name: NF-YB5 \| Seed ortholog: 337451.A0A3S4PS53 \| COG: COG2036 \| eggNOG OG: CBFD_NFYB_HMF@131567\|BS-10, CBFD_NFYB_HMF@2759\|GM-15, CBFD_NFYB_HMF@3398\|CFR-33 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000785 chromatin; GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001217 DNA-binding transcription repressor activity; GO:0001228 DNA-binding transcription activator... KEGG EC: ec:6.5.1.3 \| KO: K08065 \| Pathway: 04612, 05152, 05166 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1784	Pa10g1784`Pa10g1784.1`	…tein-containing complex assembly \| cellular heat acclimation \| WASH complex \| DNA-binding transcription factor binding Show annotation evidence eggNOG Preferred name: HSBP, LOC104606142 \| Seed ortholog: 180675.A0A4D8ZY66, 3635.A0A1U8L5U4 \| COG: S \| eggNOG OG: HSBP1@131567\|A-1, HSBP1@3398\|Cx-11, HSBP1@3398\|Cy-11, HSBP1@3629\|NP-17 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0003674 molecular_function; GO:0003714 transcription corepressor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005794 Golgi apparatus; GO:0005813 centrosome; GO:0005829 cytosol; GO:0006936 muscle contraction; GO:0007417 central nervous system development; GO... KEGG KO: K19765 \| Pathway: 04212 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1831	Pa10g1831`Pa10g1831.1`	…GO:0009414 \| GO:0034059 \| GO:0045893 \| GO:0071456 \| GO:1990837 \| GO:2000280 \| DNA-binding transcription factor activity \| nucleus \| response to water deprivation \| response to anoxia \| positive regulation of DNA-templated transcription \| cellular response to hypoxia \| sequence-specific double-strand… Show annotation evidence eggNOG Preferred name: ERF071 \| Seed ortholog: 337451.A0A443PTV2 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@3193\|KI-15, AP2@33090\|Hp-14, AP2@3398\|jd-20, AP2@58023\|Vz-18 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0034059 response to anoxia; GO:0045893 positive regulation of DNA-templated transcription; GO:0071456 cellular response to hypoxia; GO:1990837 sequence-specific double-stranded DNA binding; GO:2000280 regulation of root development KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1832	Pa10g1832`Pa10g1832.1`	…scription cis-regulatory region binding \| response to hypoxia \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| plasma membrane \| response to ethylene \| response to cytokinin \| response to jasmonic acid \| ethylene-activated signaling pathway \| heat a… Show annotation evidence eggNOG Preferred name: RAP2-3 \| Seed ortholog: 337451.A0A3S3NFQ2 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@3193\|KI-15, AP2@33090\|Hp-14, AP2@3398\|Vt-18!, AP2@58023\|NV-16 GO GO:0000976 transcription cis-regulatory region binding; GO:0001666 response to hypoxia; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005886 plasma membrane; GO:0009723 response to ethylene; GO:0009735 response to cytokinin; GO:0009753 response to jasmonic acid; GO:0009873 ethylene-activated signaling pathway;... KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1883	Pa10g1883`Pa10g1883.1`	…cription by RNA polymerase II \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| chromatin remodeling \| regulation of DNA-templated transcription \| circadian rhythm \| cellular response to starvation \| response to light stimulus \| response to absence… Show annotation evidence eggNOG Preferred name: LOC104598852 \| Seed ortholog: 337451.A0A3S3NTT8 \| COG: S \| eggNOG OG: GATA@131567\|A-1*, GATA@2759\|x-6 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006338 chromatin remodeling; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0009267 cellular response to starvation; GO:0009416 response to light stimulus; GO:0009646... KEGG KO: K09184, K11648, K11770, K14972, K18658, K21630 \| Pathway: 03082, 03250 \| BRITE: 00001, 01009, 03000, 03019, 03021, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1889	Pa10g1889`Pa10g1889.1`	…y response regulator activity \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| cytosol \| response to water deprivation \| chloroplast \| response to ethylene \| response to cytokinin \| cytokinin-activated signaling pathw… Show annotation evidence eggNOG Preferred name: LOC120105689 \| Seed ortholog: 337451.A0A3S3P630 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|Se-18, Myb_DNA-binding@1437183\|DKy-35, Myb_DNA-binding@33090\|Bhq-32, Response_reg\|AT38GL@131567, Response_reg\|AT38GL@2759, Response_reg\|AT38GL@33090, Response_reg\|AT38GL@3398 GO GO:0000156 phosphorelay response regulator activity; GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0009414 response to water deprivation; GO:0009507 chloroplast; GO:0009723 response to ethylene; GO:0009735 response to cytokinin; GO:0009736 cytokinin-activated... KEGG KO: K14491 \| Pathway: 04075 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1891	Pa10g1891`Pa10g1891.1`	…GO:0009737 \| GO:0009785 \| GO:0010161 \| GO:0043565 \| GO:0045893 \| GO:1990578 \| DNA-binding transcription factor activity, RNA polymerase II-specific \| molecular_function \| DNA binding \| protein binding \| nucleus \| endoplasmic reticulum \| response to water deprivation \| chloroplast \| response to salt … Show annotation evidence eggNOG Preferred name: DI19-2 \| Seed ortholog: 337451.A0A443PTZ9 \| COG: S \| eggNOG OG: Di19_C@131567\|A-1*, Di19_C@3193\|G-3, zf-Di19@3398\|Kd-15, zf-Di19@35493\|X-6 GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005783 endoplasmic reticulum; GO:0009414 response to water deprivation; GO:0009507 chloroplast; GO:0009651 response to salt stress; GO:0009737 response to abscisic acid; GO:0009785 blue light signaling pathway; GO:0010161 red... KEGG EC: ec:2.3.2.27 \| KO: K22376 \| BRITE: 00001, 01000, 04121	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1896	Pa10g1896`Pa10g1896.1`	…GO:0003700 \| GO:0005515 \| GO:0005516 \| GO:0005634 \| GO:0043565 \| GO:0098542 \| DNA-binding transcription factor activity \| protein binding \| calmodulin binding \| nucleus \| sequence-specific DNA binding \| defense response to other organism Show annotation evidence eggNOG Preferred name: LOC103634528 \| Seed ortholog: 337451.A0A3S3R4B5 \| COG: S \| eggNOG OG: Calmod_bind_C@131567\|A-1, Calmod_bind_M@131567\|A-1, Calmod_bind_M@35493\|Bb-8, Calmodulin_bind@131567\|A-1*, Calmodulin_bind@33090\|h-6 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0043565 sequence-specific DNA binding; GO:0098542 defense response to other organism	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1917	Pa10g1917`Pa10g1917.1`	Pa10g1917 \| Pa10g1917.1 \| LOC107769893 \| 337451.A0A3S3P640 \| RRM_1@131567\|Gk-13 \| RRM_1@2759\|DGP-27 \| S \| ec:2.1.1.354 \| ec:2.7.7.19 \| ec:2.7.7.52 \| K03102 \| K11422 \| K12891 \| K13172 \| K14573 \| K17391 \| K18709 \| K22414 \| K22611 \| K24983 \| K25078 \| 00310 \|... Show annotation evidence eggNOG Preferred name: LOC107769893 \| Seed ortholog: 337451.A0A3S3P640 \| COG: S \| eggNOG OG: RRM_1@131567\|Gk-13, RRM_1@2759\|DGP-27 GO GO:0000398 mRNA splicing, via spliceosome; GO:0000785 chromatin; GO:0003677 DNA binding; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0003730 mRNA 3'-UTR binding; GO:0005515 protein binding; GO:0005628 prospore membrane; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005847 mRNA cleavage and polyadenylation specificity factor complex; GO... KEGG EC: ec:2.1.1.354, ec:2.7.7.19, ec:2.7.7.52 \| KO: K03102, K11422, K12891, K13172, K14573, K17391, K18709, K22414, K22611, K24983, K25078 \| Pathway: 00310, 01100, 03008, 03040, 04320 \| BRITE: 00001, 01000, 03009, 03019, 03036, 03041, 04990	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1918	Pa10g1918`Pa10g1918.1`	…nsed chromosome \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| nucleolus \| cytosol \| regulation of DNA-templated transcription \| negative regulation of cell population proliferation \| asymmetric cell division \| re… Show annotation evidence eggNOG Preferred name: MYB12 \| Seed ortholog: 337451.A0A3S3NL01 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@33090\|DqE-36, Myb_DNA-binding@35493\|FSr-38, Myb_DNA-binding@58023\|KRX-43 GO GO:0000793 condensed chromosome; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0008356 asymmetric cell division; GO... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1945	Pa10g1945`Pa10g1945.1`	…GO:0006971 \| GO:0009267 \| GO:0043565 \| GO:0045893 \| GO:0046982 \| GO:2000693 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| hypotonic response \| cellular response to starvation \| sequence-specific DNA binding \| positive regulation of DNA-templated transcription \| protein he… Show annotation evidence eggNOG Preferred name: OBF1 \| Seed ortholog: 337451.A0A3S3NTW1 \| COG: S \| eggNOG OG: bZIP_1@131567\|iz-20, bZIP_1@33090\|Buj-30, bZIP_1@3398\|CPH-31 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006971 hypotonic response; GO:0009267 cellular response to starvation; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0046982 protein heterodimerization activity; GO:2000693 positive regulation of seed maturation KEGG KO: K25786 \| Pathway: 04022, 04024, 04148, 04151, 04152, 04211, 04261, 04380, 04612, 04668, 04710, 04713, 04714, 04725, 04728, 04911, 04915, 04916, 04918, 04922, 04924, 04925, 04926, 04927, 04928, 04931, 04934, 04935, 04962, 05016, 05020, 05030, 05031, 05034, 05152, 05161, 05163, 05165, 05166, 05167, 05202, 05203, 05207, 05215 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g1979	Pa10g1979`Pa10g1979.1`	…n by RNA polymerase II \| response to cadmium ion \| RNA polymerase II-specific DNA-binding transcription factor binding \| defense response to other organism \| DNA-binding transcription factor binding Show annotation evidence eggNOG Preferred name: LOC100814299 \| Seed ortholog: 337451.A0A3S3P666 \| COG: S \| eggNOG OG: Kelch_1@131567\|BJ-8, Kelch_1@2759\|YG-14, Kelch_4@131567\|b-5, Kelch_4@2759\|Ng-12 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001221 transcription coregulator binding; GO:0003674 molecular_function; GO:0003713 transcription coactivator activity; GO:0003714 transcription corepressor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005667 transcription regulator complex; GO:0005737 cytoplasm; GO:0005930 axoneme; GO:0006357... KEGG KO: K20285 \| Pathway: 03083, 04212, 04980, 05168 \| BRITE: 00001, 04131	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa10g2016	Pa10g2016`Pa10g2016.1`	…047 \| GO:1990058 \| GO:1990110 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| fruit dehiscence \| fruit replum development \| callus formation Show annotation evidence eggNOG Preferred name: 25485702 \| Seed ortholog: 57577.A0A2K3LRV3 \| COG: S \| eggNOG OG: Homeodomain@131567\|RH-16, Homeodomain@1437201\|KNG-34, Homeodomain@2231393\|TvR-40, Homeodomain@2759\|XV-17!, Homeodomain@33090\|BEo-23, Homeodomain@3398\|IuA-33 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010047 fruit dehiscence; GO:1990058 fruit replum development; GO:1990110 callus formation KEGG KO: K09299, K09357, K09378, K09379, K09380, K23560 \| Pathway: 04550, 05202, 05206, 05215 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace

Functional Annotation Search

2,385 genes for “transcription factor”

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