Functional Annotation Search

Functional discovery

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Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046: West Indian T2T annotations
3+: indexed evidence types

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2,385 genes for “transcription factor”

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Select	Gene	Matched annotation	Evidence	Actions
Select Pa05g3838	Pa05g3838`Pa05g3838.1`	…_6@3398\|BAm-25 \| S \| zf-C2H2_6_56_80 \| GO:0003700 \| GO:0005634 \| GO:0006355 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: RBE \| Seed ortholog: 337451.A0A443P5S4 \| COG: S \| eggNOG OG: zf-C2H2_6@131567\|B-2, zf-C2H2_6@1437183\|DNj-30, zf-C2H2_6@3193\|vX-21, zf-C2H2_6@3398\|BAm-25 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa05g3850	Pa05g3850`Pa05g3850.1`	…GO:0043565 \| GO:0045892 \| GO:0048367 \| GO:0048457 \| GO:0080006 \| GO:1905393 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytosol \| pattern specification process \| xylem and phloem pattern formation \| maintenance of floral meristem identity \| maintenance of inflorescence … Show annotation evidence eggNOG Preferred name: BLH9 \| Seed ortholog: 337451.A0A443NSV4 \| COG: S \| eggNOG OG: Homeobox_KN@131567\|A-1, Homeobox_KN@1437183\|Xi-18, Homeobox_KN@2759\|C-2!, Homeobox_KN@3398\|Lz-15, Homeobox_KN@58023\|Dh-11, POX@131567\|A-1, POX@1437183\|AO-11, POX@3193\|R-6 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0007389 pattern specification process; GO:0010051 xylem and phloem pattern formation; GO:0010076 maintenance of floral meristem identity; GO:0010077 maintenance of inflorescence meristem identity; GO:0010089 xylem development; GO:0010154 fruit development; GO:0010223 secondary shoot... KEGG EC: ec:2.1.1.354 \| KO: K09355, K09359, K15610, K15611, K15613, K16670, K16671, K16672, K19383, K19553, K19554, K22748, K24889, K24890, K24891 \| Pathway: 00310, 01100, 04113, 04148, 04350, 04391, 04550, 05202 \| BRITE: 00001, 01000, 03000, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa05g3894	Pa05g3894`Pa05g3894.1`	…GO:0005515 \| GO:0005634 \| GO:0009733 \| GO:0010078 \| GO:0043565 \| GO:1902459 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to auxin \| maintenance of root meristem identity \| sequence-specific DNA binding \| positive regulation of stem cell population maintenance Show annotation evidence eggNOG Preferred name: WOX9 \| Seed ortholog: 337451.A0A3S3MDD7 \| COG: S \| eggNOG OG: Homeodomain@131567\|RH-16, Homeodomain@2759\|XV-17!, Homeodomain@33090\|BEn-23, Homeodomain@3398\|DCr-27 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009733 response to auxin; GO:0010078 maintenance of root meristem identity; GO:0043565 sequence-specific DNA binding; GO:1902459 positive regulation of stem cell population maintenance KEGG KO: K09299, K09357, K09378, K09379, K09380, K23560 \| Pathway: 04550, 05202, 05206, 05215 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0024	Pa06g0024`Pa06g0024.1`	…154 \| GO:0048768 \| GO:0051301 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| circadian rhythm \| cell differentiation \| root hair cell tip growth \| cell division Show annotation evidence eggNOG Preferred name: SCL6 \| Seed ortholog: 337451.A0A3S4PFM6 \| COG: S \| eggNOG OG: GRAS@131567\|n-8, GRAS@3193\|CH-12, GRAS@3398\|JO-16, GRAS@58023\|DN-13 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0030154 cell differentiation; GO:0048768 root hair cell tip growth; GO:0051301 cell division KEGG KO: K27747 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0040	Pa06g0040`Pa06g0040.1`	…634 \| GO:0005737 \| GO:0006355 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| cytoplasm \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: ZAT4 \| Seed ortholog: 337451.A0A443PGB4 \| COG: S \| eggNOG OG: zf-C2H2_6@131567\|B-2, zf-C2H2_6@1437183\|Rt-17, zf-C2H2_6@3398\|DU-12 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0043	Pa06g0043`Pa06g0043.1`	…GO:0009845 \| GO:0009959 \| GO:0010187 \| GO:0010218 \| GO:0043565 \| GO:0090351 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| DNA-templated transcription \| regulation of DNA-templated transcription \| response to light stimulus \| plasmodesma \| double fertilization forming a zy… Show annotation evidence eggNOG Preferred name: LOC123051871 \| Seed ortholog: 337451.A0A443PGC4 \| COG: S \| eggNOG OG: HLH@131221\|BVX-22, HLH@131567\|Zg-14!, HLH@3193\|CEo-24, HLH@33090\|AbI-19, HLH@3398\|KBj-34, HLH@35493\|AqB-20, HLH@58023\|GdY-31 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006351 DNA-templated transcription; GO:0006355 regulation of DNA-templated transcription; GO:0009416 response to light stimulus; GO:0009506 plasmodesma; GO:0009567 double fertilization forming a zygote and endosperm; GO:0009637 response to blue light; GO:0009704 de-etiolation; GO:0009753 response to jasmonic... KEGG KO: K12126 \| Pathway: 04075, 04712 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0065	Pa06g0065`Pa06g0065.1`	Pa06g0065 \| Pa06g0065.1 \| LOC100808239 \| 337451.A0A3S3NWH5 \| AAA@131567\|Afu-19 \| AAA@2759\|NSR-33 \| AAA_lid_3@131567\|DL-10 \| AAA_lid_3@2759\|Xn-16 \| AAA_lid_3@3193\|NaB-40 \| AAA_lid_3@33090\|Eyw-31 \| S \| ec:1.3.5.1 \| K03061 \| 03050 \| M00009 \| M00011 \| M00148 \|... Show annotation evidence eggNOG Preferred name: LOC100808239 \| Seed ortholog: 337451.A0A3S3NWH5 \| COG: S \| eggNOG OG: AAA@131567\|Afu-19, AAA@2759\|NSR-33, AAA_lid_3@131567\|DL-10, AAA_lid_3@2759\|Xn-16, AAA_lid_3@3193\|NaB-40, AAA_lid_3@33090\|Eyw-31 GO GO:0000502 proteasome complex; GO:0004175 endopeptidase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006511 ubiquitin-dependent protein catabolic process; GO:0008540 proteasome regulatory particle, base subcomplex; GO:0016887 ATP hydrolysis activity; GO:0017025 TBP-class protein binding; GO:0031625 ubiquitin protein ligase binding; GO:0036402 proteasome-activating activity; GO:0140296 general... KEGG EC: ec:1.3.5.1 \| KO: K03061 \| Pathway: 03050 \| Module: M00009, M00011, M00148 \| BRITE: 00001, 03051	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0066	Pa06g0066`Pa06g0066.1`	…tein binding \| ribosomal large subunit binding \| regulation of RNA splicing \| DNA-binding transcription factor binding Show annotation evidence eggNOG Preferred name: LOC123157436 \| Seed ortholog: 337451.A0A3S3R7W3 \| COG: S \| eggNOG OG: HA2@131567\|Ay-8, HA2@2759\|Gg-12, Helicase_C\|KFC4E0@2759, OB_NTP_bind@131567\|C-2, OB_NTP_bind@2759\|UR-16 GO GO:0000182 rDNA binding; GO:0003723 RNA binding; GO:0003724 RNA helicase activity; GO:0003725 double-stranded RNA binding; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0019843 rRNA binding; GO:0042802 identical protein binding; GO:0043023 ribosomal large subunit binding; GO:0043484 regulation of RNA splicing; GO:0140297 DNA-binding transcription factor binding KEGG EC: ec:5.6.2.6 \| KO: K12818 \| Pathway: 03040 \| BRITE: 00001, 01000, 03041	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0081	Pa06g0081`Pa06g0081.1`	…700 \| GO:0005634 \| GO:0009834 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| plant-type secondary cell wall biogenesis Show annotation evidence eggNOG Preferred name: LOC110794647 \| Seed ortholog: 337451.A0A3S3QSD9 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@1437183\|GWx-33, AP2@33090\|KR-15, AP2@3398\|AmB-24, AP2@58023\|ld-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009834 plant-type secondary cell wall biogenesis KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0099	Pa06g0099`Pa06g0099.1`	…cription by RNA polymerase II \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to absence of light \| response to ethylene \| response to abscisic acid \| response to gibberellin … Show annotation evidence eggNOG Preferred name: KUA1 \| Seed ortholog: 337451.A0A443PG80 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|uC-23, Myb_DNA-binding@1437183\|QCZ-48, Myb_DNA-binding@33090\|LEw-44 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009646 response to absence of light; GO:0009723 response to ethylene; GO:0009737 response to abscisic acid; GO:0009739 response to... KEGG KO: K22560, K23406, K24536 \| Pathway: 03082 \| BRITE: 00001, 03036, 04121	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0100	Pa06g0100`Pa06g0100.1`	…GO:0043565 \| GO:0044839 \| GO:0045893 \| GO:0048235 \| GO:0048555 \| GO:0055047 \| DNA-binding transcription factor activity \| nucleus \| sequence-specific DNA binding \| cell cycle G2/M phase transition \| positive regulation of DNA-templated transcription \| pollen sperm cell differentiation \| generative c… Show annotation evidence eggNOG Preferred name: DUO1 \| Seed ortholog: 337451.A0A3S4PFI2 \| COG: S \| eggNOG OG: Myb_DNA-binding@131221\|BKd-31, Myb_DNA-binding@131567\|AOS-27 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0043565 sequence-specific DNA binding; GO:0044839 cell cycle G2/M phase transition; GO:0045893 positive regulation of DNA-templated transcription; GO:0048235 pollen sperm cell differentiation; GO:0048555 generative cell nucleus; GO:0055047 generative cell mitosis KEGG EC: ec:1.17.99.9 \| KO: K09422 \| Pathway: 00190, 00860, 01100, 01110, 01240, 04626 \| Module: M00154 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0103	Pa06g0103`Pa06g0103.1`	…gion binding \| developmental process involved in reproduction \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| shade avoidance \| response to auxin \| auxin-activated signaling pathway \| response to cytokinin \| unidimensional cell growth \| shoot system morphogene… Show annotation evidence eggNOG Preferred name: LOC104610464 \| Seed ortholog: 337451.A0A443PG61 \| COG: S \| eggNOG OG: HALZ@131567\|y-8, HALZ@3193\|Bd-11, HALZ@3398\|Ll-16, HALZ@35493\|Au-10, HD-ZIP_N@131567\|A-1*, HD-ZIP_N@3193\|d-9!, Homeodomain@131221\|HaM-32, Homeodomain@131567\|XU-17, Homeodomain@2759\|ACU-20!, Homeodomain@3193\|Tih-40, Homeodomain@3398\|fHj-46, Homeodomain@35493\|BwP-25 GO GO:0000976 transcription cis-regulatory region binding; GO:0003006 developmental process involved in reproduction; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009641 shade avoidance; GO:0009733 response to auxin; GO:0009734 auxin-activated signaling pathway; GO:0009735 response to cytokinin; GO:0009826 unidimensional cell growth;... KEGG KO: K09338 \| Pathway: 04113, 04148, 04927, 04934, 05202 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0107	Pa06g0107`Pa06g0107.1`	… oxygen species \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to heat \| response to cold \| response to water deprivation \| response to nematode \| response to h… Show annotation evidence eggNOG Preferred name: ERF5 \| Seed ortholog: 337451.A0A3S3QUE3 \| eggNOG OG: AP2@131567\|Eb-12, AP2@33090\|Hk-14 GO GO:0000302 response to reactive oxygen species; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009624 response to nematode;... KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0108	Pa06g0108`Pa06g0108.1`	… oxygen species \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to heat \| response to cold \| response to water deprivation \| response to nematode \| response to h… Show annotation evidence eggNOG Preferred name: ERF5 \| Seed ortholog: 337451.A0A3S3QUE3 \| eggNOG OG: AP2@131567\|Eb-12, AP2@33090\|Hk-14 GO GO:0000302 response to reactive oxygen species; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009624 response to nematode;... KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0109	Pa06g0109`Pa06g0109.1`	… oxygen species \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to heat \| response to cold \| response to water deprivation \| response to nematode \| response to h… Show annotation evidence eggNOG Preferred name: ERF5 \| Seed ortholog: 337451.A0A3S3QUE3 \| eggNOG OG: AP2@131567\|Eb-12, AP2@33090\|Hk-14 GO GO:0000302 response to reactive oxygen species; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009624 response to nematode;... KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0117	Pa06g0117`Pa06g0117.1`	…regulatory region binding \| transcription corepressor binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| chromatin silencing complex \| flower development \| heterochromatin formation \| PcG protein complex \| regulation of long-day photoperiodism, flowering Show annotation evidence eggNOG Preferred name: LOC101757671 \| Seed ortholog: 337451.A0A443PG55 \| COG: S \| eggNOG OG: VEFS-Box@2759\|A-1, VEFS-Box@3193\|Kk-18 GO GO:0000976 transcription cis-regulatory region binding; GO:0001222 transcription corepressor binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005677 chromatin silencing complex; GO:0009908 flower development; GO:0031507 heterochromatin formation; GO:0031519 PcG protein complex; GO:0048586 regulation of long-day photoperiodism, flowering KEGG KO: K11463 \| Pathway: 03083 \| BRITE: 00001, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0119	Pa06g0119`Pa06g0119.1`	…RNA polymerase II transcription regulator complex \| M/G1 phase-specific MADS box-forkhead transcription factor complex \| sympathetic neuron axon guidance \| cell-cell adhesion \| NMDA selective glutamate receptor signaling pathway \| AMPA selective glutamate receptor signaling pathway \| adenylate cycla… Show annotation evidence eggNOG Preferred name: PanMADS12 \| Seed ortholog: 337451.A0A3S3NCY7 \| COG: S \| eggNOG OG: SRF-TF@131567\|A-1*, SRF-TF@1437183\|BY-12, SRF-TF@2759\|C-2!, SRF-TF@3193\|Az-11 GO GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0001568 blood vessel development; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001701 in utero embryonic development; GO:0001707 mesoderm formation; GO... KEGG KO: K12412 \| Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 \| BRITE: 00001, 03000, 03021	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0133	Pa06g0133`Pa06g0133.1`	… \| DNA-binding transcription activator activity, RNA polymerase II-specific \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| embryo development ending in seed dormancy \| flower development \| regulation of flower development \| regul… Show annotation evidence eggNOG Preferred name: GATA18 \| Seed ortholog: 77586.A0A0D9V3T2 \| COG: S \| eggNOG OG: GATA@131567\|A-1*, GATA@1437197\|Vk-16, GATA@2759\|x-6, GATA@3398\|Hh-13, GATA@4479\|uB-19 GO GO:0000976 transcription cis-regulatory region binding; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009793 embryo development ending in seed dormancy; GO:0009908 flower development; GO:0009909 regulation of flower... KEGG KO: K09184, K11648, K11770, K14972, K18658, K21630 \| Pathway: 03082, 03250 \| BRITE: 00001, 01009, 03000, 03019, 03021, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0155	Pa06g0155`Pa06g0155.1`	…romatin binding \| double-stranded DNA binding \| single-stranded DNA binding \| DNA-binding transcription factor activity \| transcription coactivator activity \| RNA binding \| protein binding \| cellular_component \| extracellular region \| nucleus \| nucleoplasm \| chromosome \| polytene chromosome \| polyte… Show annotation evidence eggNOG Preferred name: SMARCE1 \| Seed ortholog: 337451.A0A3S4PFF0 \| eggNOG OG: HMG_box@131567\|Aj-7 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000228 nuclear chromosome; GO:0000400 four-way junction DNA binding; GO:0000404 heteroduplex DNA loop binding; GO:0000405 bubble DNA binding; GO:0000722 telomere maintenance via recombination; GO:0000741 karyogamy; GO:0000776 kinetochore; GO:0000781 chromosome, telomeric region; GO:0000785 chromatin; GO:0000791 euchromatin; GO:0000793... KEGG EC: ec:2.1.1.354, ec:2.1.1.357 \| KO: K03004, K09272, K09273, K10802, K11295, K11297, K11424, K11651, K11680, K11830, K22483, K22748, K24650, K24660, K25507, K26796, K26957, K27246 \| Pathway: 00310, 01100, 03020, 03082, 03410, 04140, 04217, 04613, 04714, 05202, 05225 \| BRITE: 00001, 01000, 01611, 03000, 03021, 03029, 03036, 03400, 04147	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0163	Pa06g0163`Pa06g0163.1`	…A polymerase II \| endothelial tube morphogenesis \| RNA polymerase II-specific DNA-binding transcription factor binding \| protein-containing complex assembly \| extracellular exosome \| cellular response to xenobiotic stimulus \| symbiont-mediated disruption of host cell PML body \| ciliary plasm \| liver… Show annotation evidence eggNOG Preferred name: CKB1 \| Seed ortholog: 337451.A0A443PG43 \| COG: S \| eggNOG OG: CK_II_beta@131567\|A-1*, CK_II_beta@2759\|O-5 GO GO:0000028 ribosomal small subunit assembly; GO:0000785 chromatin; GO:0001650 fibrillar center; GO:0003674 molecular_function; GO:0003682 chromatin binding; GO:0004674 protein serine/threonine kinase activity; GO:0005102 signaling receptor binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005829... KEGG KO: K03115 \| Pathway: 03008, 03083, 04712 \| BRITE: 00001, 03009, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0199	Pa06g0199`Pa06g0199.1`	…nsed chromosome \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| nucleolus \| cytosol \| regulation of DNA-templated transcription \| negative regulation of cell population proliferation \| asymmetric cell division \| re… Show annotation evidence eggNOG Preferred name: MYB39 \| Seed ortholog: 337451.A0A443PG05 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|HJd-40, Myb_DNA-binding@33090\|FSl-38, Myb_DNA-binding@35493\|GNw-39, Myb_DNA-binding@58023\|YIl-54 GO GO:0000793 condensed chromosome; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0008356 asymmetric cell division; GO... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0205	Pa06g0205`Pa06g0205.1`	…O:0003677 \| GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0009408 \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to heat Show annotation evidence eggNOG Preferred name: HSF8, HSFA1 \| Seed ortholog: 337451.A0A3S3MV96, 3821.A0A151R9Y3 \| COG: S \| eggNOG OG: HSF_DNA-bind@131567\|Dp-10, HSF_DNA-bind@2231393\|Cgk-32, HSF_DNA-bind@3193\|AWd-23, HSF_DNA-bind@33090\|fZ-18, HSF_DNA-bind@3398\|BEb-26, HSF_DNA-bind@3398\|BEc-26, HSF_DNA-bind@35493\|uY-20 GO GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009408 response to heat KEGG KO: K09419 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0206	Pa06g0206`Pa06g0206.1`	…O:0003677 \| GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0009408 \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to heat Show annotation evidence eggNOG Preferred name: HSFA1 \| Seed ortholog: 337451.A0A3S3MV96 \| COG: S \| eggNOG OG: HSF_DNA-bind@131567\|Dp-10, HSF_DNA-bind@3193\|AWd-23, HSF_DNA-bind@33090\|fZ-18, HSF_DNA-bind@3398\|BEb-26, HSF_DNA-bind@35493\|uY-20 GO GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009408 response to heat KEGG KO: K09419 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0261	Pa06g0261`Pa06g0261.1`	Pa06g0261 \| Pa06g0261.1 \| GLR26 \| 337451.A0A3S3NZ61 \| ANF_receptor@131567\|Gc-16 \| ANF_receptor@1437183\|EJw-43 \| ANF_receptor@3193\|Cri-40 \| Lig_chan@131567\|DM-12 \| Lig_chan@1437183\|AHc-26! \| Lig_chan@3193\|hl-22 \| Lig_chan@3398\|nF-23 \| SBP_bac_3@131567\|C-2! \|... Show annotation evidence eggNOG Preferred name: GLR26 \| Seed ortholog: 337451.A0A3S3NZ61 \| COG: S \| eggNOG OG: ANF_receptor@131567\|Gc-16, ANF_receptor@1437183\|EJw-43, ANF_receptor@3193\|Cri-40, Lig_chan@131567\|DM-12, Lig_chan@1437183\|AHc-26!, Lig_chan@3193\|hl-22, Lig_chan@3398\|nF-23, SBP_bac_3@131567\|C-2!, SBP_bac_3@1437183\|Awq-30, SBP_bac_3@3193\|AIr-27 GO GO:0000149 SNARE binding; GO:0001540 amyloid-beta binding; GO:0001640 adenylate cyclase inhibiting G protein-coupled glutamate receptor activity; GO:0001661 conditioned taste aversion; GO:0001662 behavioral fear response; GO:0001666 response to hypoxia; GO:0001919 regulation of receptor recycling; GO:0001964 startle response; GO:0001965 G-protein alpha-subunit binding; GO:0001966 thigmotaxis; GO:0001967 suckling... KEGG KO: K05387 \| Pathway: 04014, 04015, 04020, 04024, 04080, 04713, 04720, 04723, 04724, 04728, 04730, 05010, 05014, 05016, 05017, 05020, 05022, 05030, 05031, 05033, 05034, 05202, 05322 \| BRITE: 00001, 04040	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0272	Pa06g0272`Pa06g0272.1`	…010 \| GO:0048825 \| GO:0090451 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| cytoplasm \| positive regulation of cell population proliferation \| embryo development ending in seed dormancy \| regulation of meristem growth \| establishment of cell po… Show annotation evidence eggNOG Preferred name: LOC109022004 \| Seed ortholog: 3750.A0A498IVT4 \| COG: S \| eggNOG OG: Homeodomain@131567\|RH-16, Homeodomain@2759\|XV-17!, Homeodomain@33090\|AkS-22, Homeodomain@3398\|BaY-24, Homeodomain@3749\|SJD-39, Ras@131567\|kE-27, Ras@1437201\|AFcG-85, Ras@2759\|Fqt-43!, Ras@33090\|OHr-51, Ras@3749\|AHnL-93, Ras@58023\|wIM-73 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0008284 positive regulation of cell population proliferation; GO:0009793 embryo development ending in seed dormancy; GO:0010075 regulation of meristem growth; GO:0030010 establishment of cell polarity; GO:0048825 cotyledon development; GO:0090451 cotyledon... KEGG KO: K07904 \| Pathway: 04144 \| BRITE: 00001, 04031, 04131, 04147	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0273	Pa06g0273`Pa06g0273.1`	…is-regulatory region binding \| DNA-binding transcription repressor activity \| DNA-binding transcription factor activity \| protein binding \| nucleus \| mitochondrion \| regulation of DNA-templated transcription \| response to abscisic acid \| cellular response to phosphate starvation \| sequence-specific … Show annotation evidence eggNOG Preferred name: HHO3 \| Seed ortholog: 337451.A0A3S3ML99 \| COG: S \| eggNOG OG: Myb_DNA-binding@33090\|B-2!, Myb_DNA-binding@35493\|AI-8 GO GO:0000976 transcription cis-regulatory region binding; GO:0001217 DNA-binding transcription repressor activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0006355 regulation of DNA-templated transcription; GO:0009737 response to abscisic acid; GO:0016036 cellular response to phosphate starvation; GO:0043565 sequence-specific...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0284	Pa06g0284`Pa06g0284.1`	…77 \| GO:1902584 \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to auxin \| auxin metabolic process \| vegetative phase change \| abaxial cell fate specification \| … Show annotation evidence eggNOG Preferred name: LOC104599494 \| Seed ortholog: 337451.A0A443PFU2 \| COG: S \| eggNOG OG: Auxin_resp@131567\|A-1, Auxin_resp@2759\|B-2, Auxin_resp@3398\|Cm-12, B3@131221\|yd-19, B3@131567\|A-1, B3@3193\|AHu-20, B3@33090\|Id-12, B3@3398\|BCh-24 GO GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009733 response to auxin; GO:0009850 auxin metabolic process; GO:0010050 vegetative phase change; GO:0010158 abaxial cell fate specification; GO:0010582 floral meristem... KEGG KO: K14486 \| Pathway: 04075 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0291	Pa06g0291`Pa06g0291.1`	… \| protein-cysteine methyltransferase activity \| histone H4 reader activity \| DNA-binding transcription factor binding \| histone reader activity \| ATP-dependent chromatin remodeler activity \| ATP-dependent H3-H4 histone complex chaperone activity \| transcription elongation-coupled chromatin remodeli… Show annotation evidence eggNOG Preferred name: 25487297 \| Seed ortholog: 337451.A0A443PFR3 \| COG: S \| eggNOG OG: AAA@131567\|Afu-19, AAA@2759\|EPl-25, AAA_lid_3@131567\|BL-8, zf-HC5HC2H@131567\|A-1*, zf-HC5HC2H@2759\|e-5! GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000775 chromosome, centromeric region; GO:0000785 chromatin; GO:0000976 transcription cis-regulatory region binding; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0001555 oocyte growth; GO:0001701 in utero embryonic development; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003680 minor... KEGG EC: ec:2.1.1.354 \| KO: K22531 \| Pathway: 00310, 01100, 03082, 04934, 05202 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0295	Pa06g0295`Pa06g0295.1`	…364 \| GO:0048510 \| GO:0048573 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| asymmetric cell division \| positive regulation of gibberellic acid mediated signaling pathway \| regulation… Show annotation evidence eggNOG Preferred name: MGP \| Seed ortholog: 337451.A0A443PFQ4 \| COG: S \| eggNOG OG: UNK.IYJ6@131567\|A-1*, UNK.IYJ6@3193\|y-10, UNK.IYJ6@3398\|AW-12, UNK.IYJ6@58023\|AH-11 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008356 asymmetric cell division; GO:0009939 positive regulation of gibberellic acid mediated signaling pathway; GO:0010075 regulation of meristem growth; GO:0010150 leaf senescence; GO:0019900 kinase... KEGG KO: K25870 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa06g0297	Pa06g0297`Pa06g0297.1`	…634 \| GO:0009637 \| GO:0009646 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| response to blue light \| response to absence of light Show annotation evidence eggNOG Preferred name: LOC104599481 \| Seed ortholog: 337451.A0A443PFS9 \| COG: S \| eggNOG OG: Homeodomain@131567\|XU-17, Homeodomain@1437183\|Has-32, Homeodomain@2759\|ACU-20! GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009637 response to blue light; GO:0009646 response to absence of light KEGG KO: K08036, K09313, K09331, K09338, K09355, K09358, K09364, K15609, K15610, K15611, K15614, K15615, K19472, K19473, K19474, K24885 \| Pathway: 04113, 04148, 04927, 04934, 05202 \| BRITE: 00001, 03000, 03021	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace

Functional Annotation Search

2,385 genes for “transcription factor”

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