Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046
West Indian T2T annotations
3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

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2,385 genes for “transcription factor”

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GO enrichmentExport FASTA
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Pa05g1691Pa05g1691.1

…629 | GO:0048449 | GO:0090701 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | cytosol | regulation of DNA-templated transcription | negative regulation of gene expression | floral organ formation | specification of plant organ i…

Show annotation evidence
eggNOG
Preferred name: LOC123119581 | Seed ortholog: 337451.A0A443NXA7 | COG: S | eggNOG OG: Myb_DNA-binding@33090|B-2!, Myb_DNA-binding@3398|Ab-9, Myb_DNA-binding@35493|X-6
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0010629 negative regulation of gene expression; GO:0048449 floral organ formation; GO:0090701 specification of plant organ identity
eggNOGGO
eggNOG-inferred
Pa05g1703Pa05g1703.1

…440 | GO:0042803 | GO:0048586 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | stomatal lineage progression | protein homodimerization activity | regulation of long-day photoperiodism, flowering

Show annotation evidence
eggNOG
Preferred name: LOC104595549 | Seed ortholog: 56857.A0A200QI41, 56857.A0A200QXU6 | COG: S | eggNOG OG: K-box@131567|A-1*, K-box@2759|F-3, K-box@3398|LF-13, K-box@35493|M-4, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|CHg-29, SRF-TF@35493|jX-20
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0010440 stomatal lineage progression; GO:0042803 protein homodimerization activity; GO:0048586 regulation of long-day photoperiodism, flowering
KEGG
KO: K09264 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa05g1709Pa05g1709.1

…zone assembly | meiotic spindle midzone assembly | RNA polymerase II-specific DNA-binding transcription factor binding | pollen tube tip | molecular sequestering activity

Show annotation evidence
eggNOG
Preferred name: KIN4C | Seed ortholog: 337451.A0A443NX98 | COG: S | eggNOG OG: Kinesin@131567|A-1*, Kinesin@2759|TX-12, Kinesin@3193|CrG-22
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000278 mitotic cell cycle; GO:0000281 mitotic cytokinesis; GO:0003774 cytoskeletal motor activity; GO:0003777 microtubule motor activity; GO:0005119 smoothened binding; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005634 nucleus; GO:0006996 organelle organization; GO:0007052 mitotic spindle organization; GO:0007059 chromosome...
KEGG
KO: K06227, K10393, K10395, K10396, K10397, K10405, K10406, K18806, K24186 | Pathway: 04144, 04341, 04814 | BRITE: 00001, 03036, 04131, 04147, 04812
eggNOGGOKEGG
eggNOG-inferred
Pa05g1717Pa05g1717.1

…is-regulatory region binding | DNA-binding transcription activator activity | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | regulation of DNA-templated transcription | regulation of cell size | response to nematode | regulation of defense response | protein homo…

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eggNOG
Preferred name: PCF2 | Seed ortholog: 337451.A0A3S3MGE6 | COG: S | eggNOG OG: CCT@131567|A-1*, CCT@2759|I-4, CCT@35493|CW-9, GATA@131567|A-1*, GATA@2759|x-6, GATA@35493|Df-11, TCP@131221|AC-7, TCP@131567|A-1*, TCP@2759|G-3, TCP@3193|Fh-13, tify@131567|A-1*, tify@35493|AV-9
GO
GO:0000976 transcription cis-regulatory region binding; GO:0001216 DNA-binding transcription activator activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0008361 regulation of cell size; GO:0009624 response to nematode; GO:0031347 regulation of defense response; GO:0042803...
KEGG
KO: K09184, K11648, K11770, K14972, K18658, K21630 | Pathway: 03082, 03250 | BRITE: 00001, 01009, 03000, 03019, 03021, 03036
eggNOGGOKEGG
eggNOG-inferred
Pa05g1728Pa05g1728.1

…O:0010052 | GO:0010118 | GO:0010227 | GO:0043565 | GO:0045893 | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | guard cell differentiation | stomatal movement | floral organ abscission | sequence-specific DNA binding |…

Show annotation evidence
eggNOG
Preferred name: DOF4.7 | Seed ortholog: 337451.A0A3S3QCF1 | COG: S | eggNOG OG: zf-Dof@131567|A-1*, zf-Dof@3193|As-7, zf-Dof@33090|d-5, zf-Dof@3398|DF-9
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010052 guard cell differentiation; GO:0010118 stomatal movement; GO:0010227 floral organ abscission; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
Pa05g1744Pa05g1744.1

…ing | RNA polymerase II cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity, RNA polymerase II-specific | cis-regulatory region sequence-specific DNA binding | DNA-binding transcription repressor activity, RNA polymerase II-specific | DNA-binding transcrip…

Show annotation evidence
eggNOG
Preferred name: ANR1, LOC123128283, MADS57 | Seed ortholog: 337451.A0A3S3P514, 3476.A0A2P5CF08, 4615.A0A199V158 | COG: S | eggNOG OG: K-box@131567|A-1*, K-box@1437183|hz-17, K-box@2759|F-3, K-box@3398|Fv-11, K-box@3398|Fw-11!, K-box@35493|M-4, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|ADY-22, SRF-TF@3398|BGP-26!, SRF-TF@35493|jX-20
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0000900 mRNA regulatory element binding translation repressor activity; GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase...
KEGG
KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021, 04131
eggNOGGOKEGG
eggNOG-inferred
Pa05g1758Pa05g1758.1

… transcription activator activity, RNA polymerase II-specific | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | spindle | regulation of DNA-templated transcription | negative regulation of cell population proliferation | phragmoplast | response to fungus | respo…

Show annotation evidence
eggNOG
Preferred name: MYB3R4 | Seed ortholog: 337451.A0A443NXB7 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AWj-28, Myb_DNA-binding@2759|AhA-29
GO
GO:0000976 transcription cis-regulatory region binding; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005819 spindle; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0009524...
KEGG
KO: K09420 | Pathway: 04151, 04218 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa05g1784Pa05g1784.1

…GO:0010166 | GO:0042335 | GO:0043565 | GO:0045893 | GO:1902584 | GO:1904278 | DNA-binding transcription factor activity | nucleus | response to osmotic stress | response to water deprivation | response to abscisic acid | ethylene-activated signaling pathway | cutin biosynthetic process | wax metabol…

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eggNOG
Preferred name: WIN1 | Seed ortholog: 337451.A0A443NX34 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@3193|Nk-16, AP2@33090|Hu-14, AP2@3398|lN-20
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006970 response to osmotic stress; GO:0009414 response to water deprivation; GO:0009737 response to abscisic acid; GO:0009873 ethylene-activated signaling pathway; GO:0010143 cutin biosynthetic process; GO:0010166 wax metabolic process; GO:0042335 cuticle development; GO:0043565 sequence-specific DNA binding; GO:0045893 positive...
eggNOGGO
eggNOG-inferred
Pa05g1791Pa05g1791.1

…944 | GO:1902183 | GO:2000024 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | polarity specification of adaxial/abaxial axis | regulation of shoot apical meristem development | regulat…

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eggNOG
Preferred name: LOC104595406 | Seed ortholog: 337451.A0A3S3N970 | COG: S | eggNOG OG: YABBY@2759|C-2!, YABBY@3398|Bl-10
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009944 polarity specification of adaxial/abaxial axis; GO:1902183 regulation of shoot apical meristem development; GO:2000024 regulation of leaf development
KEGG
KO: K25796 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa05g1796Pa05g1796.1

Pa05g1796 | Pa05g1796.1 | RPL37A | 337451.A0A3S3P4Z7 | Ribosomal_L37e@131567|A-1 | Ribosomal_L37e@58023|OJ-19 | S | K02922 | 03010 | 00001 | 01610 | 03011 | Ribosomal_L37e_3_53 | GO:0000448 | GO:0002181 | GO:0003723 | GO:0003735 | GO:0005634 | GO:0005730 |...

Show annotation evidence
eggNOG
Preferred name: RPL37A | Seed ortholog: 337451.A0A3S3P4Z7 | COG: S | eggNOG OG: Ribosomal_L37e@131567|A-1, Ribosomal_L37e@58023|OJ-19
GO
GO:0000448 cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0002181 cytoplasmic translation; GO:0003723 RNA binding; GO:0003735 structural constituent of ribosome; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005840 ribosome; GO:0006412 translation; GO:0006941 striated muscle contraction; GO:0007283...
KEGG
KO: K02922 | Pathway: 03010 | BRITE: 00001, 01610, 03011
eggNOGGOKEGG
eggNOG-inferred
Pa05g1801Pa05g1801.1

…n cis-regulatory region binding | DNA binding | double-stranded DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to cold | photomorphogenesis | response to abscisic acid | gibberellic acid mediated signaling pa…

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eggNOG
Preferred name: LOC107909196 | Seed ortholog: 2711.A0A067FEU7 | COG: S | eggNOG OG: bZIP_1@131221|COW-31, bZIP_1@131567|XL-17, bZIP_1@2759|is-20
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003690 double-stranded DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0009640 photomorphogenesis; GO:0009737 response to abscisic acid; GO:0009740 gibberellic acid mediated...
KEGG
KO: K16241 | Pathway: 04712 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa05g1805Pa05g1805.1

…| zf-CCCH_4_148_169 | zf-CCCH_81_105 | GO:0003700 | GO:0005634 | GO:0006355 | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: LOC104592377 | Seed ortholog: 337451.A0A443NX42 | COG: S | eggNOG OG: zf-CCCH@131567|LU-16, zf-CCCH@2759|AGj-24, zf-CCCH@3193|Elp-37, zf-CCCH_4@131567|A-1*, zf-CCCH_4@2759|Am-7
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
KEGG
EC: ec:2.3.2.27, ec:2.7.11.1 | KO: K08959, K12872, K13107, K13152, K15687, K15690, K27706 | Pathway: 03040 | BRITE: 00001, 01000, 01001, 03000, 03012, 03036, 03041, 04121
eggNOGGOKEGG
eggNOG-inferred
Pa05g1824Pa05g1824.1

Pa05g1824 | Pa05g1824.1 | LOC107962641 | 337451.A0A443NX31 | WD40@131567|BER-20 | WD40@2759|CQc-22 | WD40@3398|AXQv-47 | S | K13137 | 00001 | 03041 | WD40_179_214 | WD40_265_297 | WD40_54_89 | WD40_94_130 | GO:0000122 | GO:0000380 | GO:0000387 | GO:0003723 ...

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eggNOG
Preferred name: LOC107962641 | Seed ortholog: 337451.A0A443NX31 | COG: S | eggNOG OG: WD40@131567|BER-20, WD40@2759|CQc-22, WD40@3398|AXQv-47
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000380 alternative mRNA splicing, via spliceosome; GO:0000387 spliceosomal snRNP assembly; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0005102 signaling receptor binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0007476 imaginal disc-derived wing...
KEGG
KO: K13137 | BRITE: 00001, 03041
eggNOGGOKEGG
eggNOG-inferred
Pa05g1851Pa05g1851.1

…733 | GO:0042802 | GO:0080086 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | de-etiolation | response to auxin | identical protein binding | stamen filament development

Show annotation evidence
eggNOG
Preferred name: IAA6 | Seed ortholog: 337451.A0A3S3MG76 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|CX-9, AUX_IAA@3398|Fp-11
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009704 de-etiolation; GO:0009733 response to auxin; GO:0042802 identical protein binding; GO:0080086 stamen filament development
KEGG
KO: K14484 | Pathway: 04075 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa05g1904Pa05g1904.1

Pa05g1904 | Pa05g1904.1 | LOC108999181 | 337451.A0A3S3NN19 | Ribosomal_S9@131567|A-1 | Ribosomal_S9@1437183|CKL-32 | S | K02960 | 03010 | 00001 | 01610 | 03011 | Ribosomal_S9_11_143 | GO:0000462 | GO:0002181 | GO:0003723 | GO:0003729 | GO:0003735 | GO...

Show annotation evidence
eggNOG
Preferred name: LOC108999181 | Seed ortholog: 337451.A0A3S3NN19 | COG: S | eggNOG OG: Ribosomal_S9@131567|A-1, Ribosomal_S9@1437183|CKL-32
GO
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0002181 cytoplasmic translation; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0003735 structural constituent of ribosome; GO:0005515 protein binding; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005783 endoplasmic reticulum; GO:0005829 cytosol; GO:0005840 ribosome; GO:0006364...
KEGG
KO: K02960 | Pathway: 03010 | BRITE: 00001, 01610, 03011
eggNOGGOKEGG
eggNOG-inferred
Pa05g1910Pa05g1910.1

…87 | GO:0097548 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | transcription regulator complex | regulation of DNA-templated transcription | response to cold | flower development | regulation of flower development…

Show annotation evidence
eggNOG
Preferred name: AP2 | Seed ortholog: 337451.A0A443NWZ0 | COG: S | eggNOG OG: AP2@131567|Eo-12, AP2@33090|Xr-18, AP2@58023|AYo-23
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005667 transcription regulator complex; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0009908 flower development; GO:0009909 regulation of flower development; GO:0010073 meristem maintenance;...
KEGG
KO: K09284 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa05g1917Pa05g1917.1

…700 | GO:0005516 | GO:0005634 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | calmodulin binding | nucleus

Show annotation evidence
eggNOG
Preferred name: WRKY15 | Seed ortholog: 337451.A0A443NWT1 | COG: S | eggNOG OG: Plant_zn_clust@131567|A-1*, Plant_zn_clust@1437183|Aw-8, Plant_zn_clust@3193|C-2, Plant_zn_clust@3398|N-4, WRKY@131567|A-1*, WRKY@2759|CB-10, WRKY@3193|ZX-18, WRKY@33090|Ic-14
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005516 calmodulin binding; GO:0005634 nucleus
KEGG
KO: K13425 | Pathway: 04016, 04626 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa05g1918Pa05g1918.1

…515 | GO:0005516 | GO:0005634 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | calmodulin binding | nucleus

Show annotation evidence
eggNOG
Preferred name: WRKY15 | Seed ortholog: 337451.A0A3S3MG49 | COG: S | eggNOG OG: Plant_zn_clust@131567|A-1*, Plant_zn_clust@1437183|Aw-8, Plant_zn_clust@3193|C-2, Plant_zn_clust@3398|N-4, WRKY@131567|A-1*, WRKY@1437183|Agk-26!, WRKY@2759|CB-10, WRKY@3193|lG-20, WRKY@33090|Ic-14, WRKY@3398|zR-22
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus
KEGG
KO: K13425 | Pathway: 04016, 04626 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa05g1921Pa05g1921.1

Pa05g1921 | Pa05g1921.1 | ATPEN2 | 337451.A0A3S3P4V4 | PTEN_C2@131567|A-1* | PTEN_C2@2759|If-17 | S | ec:3.1.3.16 | ec:3.1.3.48 | ec:3.1.3.67 | K01110 | 00562 | 01100 | 04070 | 00001 | 01000 | 01009 | PTEN_C2_328_448 | GO:0000281 | GO:0001525 | GO:0001568 |...

Show annotation evidence
eggNOG
Preferred name: ATPEN2 | Seed ortholog: 337451.A0A3S3P4V4 | COG: S | eggNOG OG: PTEN_C2@131567|A-1*, PTEN_C2@2759|If-17
GO
GO:0000281 mitotic cytokinesis; GO:0001525 angiogenesis; GO:0001568 blood vessel development; GO:0001649 osteoblast differentiation; GO:0001931 uropod; GO:0002164 larval development; GO:0002275 myeloid cell activation involved in immune response; GO:0002902 regulation of B cell apoptotic process; GO:0004438 phosphatidylinositol-3-phosphate phosphatase activity; GO:0004721 phosphoprotein phosphatase activity; GO...
KEGG
EC: ec:3.1.3.16, ec:3.1.3.48, ec:3.1.3.67 | KO: K01110 | Pathway: 00562, 01100, 04070 | BRITE: 00001, 01000, 01009
eggNOGGOKEGG
eggNOG-inferred
Pa05g1941Pa05g1941.1

…001 | GO:2000022 | GO:2000031 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to heat | response to water deprivation | response to salt stress | response to abscisic acid | r…

Show annotation evidence
eggNOG
Preferred name: LOC101249261 | Seed ortholog: 337451.A0A443NWV1 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AhB-29, Myb_DNA-binding@58023|FQV-38!
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat; GO:0009414 response to water deprivation; GO:0009651 response to salt stress; GO:0009737 response to abscisic acid; GO:0009751 response to salicylic acid; GO:0009753 response...
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa05g1971Pa05g1971.1

…ing | RNA polymerase II cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity, RNA polymerase II-specific | DNA-binding transcription repressor activity, RNA polymerase II-specific | DNA-binding transcription activator activity, RNA polymerase II-specific | …

Show annotation evidence
eggNOG
Preferred name: TGIF1 | Seed ortholog: 337451.A0A3S4NXN0 | COG: S | eggNOG OG: Homeobox_KN@131567|A-1*, Homeobox_KN@2759|IT-13!
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000281 mitotic cytokinesis; GO:0000785 chromatin; GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001227 DNA-binding transcription repressor activity, RNA polymerase...
KEGG
EC: ec:2.1.1.354 | KO: K09355, K09359, K15610, K15611, K19383, K19553, K19554, K22748, K24890 | Pathway: 00310, 01100, 04113, 04148, 04350, 05202 | BRITE: 00001, 01000, 03000, 03036
eggNOGGOKEGG
eggNOG-inferred
Pa05g1973Pa05g1973.1

…ing | RNA polymerase II cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity, RNA polymerase II-specific | cis-regulatory region sequence-specific DNA binding | DNA-binding transcription repressor activity, RNA polymerase II-specific | DNA-binding transcrip…

Show annotation evidence
eggNOG
Preferred name: LOC107910304 | Seed ortholog: 29760.E0CPM9, 3641.A0A061FMR3 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|AOE-23, SRF-TF@3629|DJv-32, SRF-TF@58023|ij-20
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0000900 mRNA regulatory element binding translation repressor activity; GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase...
KEGG
KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021, 04131
eggNOGGOKEGG
eggNOG-inferred
Pa05g1990Pa05g1990.1

…74 | GO:0003700 | GO:0005515 | GO:0005634 | GO:0006355 | molecular_function | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: LOC110790339 | Seed ortholog: 337451.A0A443NWN7 | COG: S | eggNOG OG: GRAS@131567|Ad-10, GRAS@3193|Db-13, GRAS@3398|Ne-17
GO
GO:0003674 molecular_function; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
Pa05g1997Pa05g1997.1

…ence-specific DNA binding | transcription corepressor binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | response to oxidative stress | response to cold | response to water deprivation | response to wounding | response to high light intensity | response t…

Show annotation evidence
eggNOG
Preferred name: LOC109014213 | Seed ortholog: 337451.A0A3S3N8X4 | COG: S | eggNOG OG: zf-C2H2_6@131567|B-2, zf-C2H2_6@1437183|PA-16
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0001222 transcription corepressor binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006979 response to oxidative stress; GO:0009409 response to cold; GO:0009414 response to water...
eggNOGGO
eggNOG-inferred
Pa05g2000Pa05g2000.1

…H_293_333 | GO:0003677 | GO:0003700 | GO:0005634 | GO:0006355 | DNA binding | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: BHLH84 | Seed ortholog: 337451.A0A3S3NMX9 | COG: S | eggNOG OG: HLH@3398|LS-12, HLH@58023|y-7
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
Pa05g2001Pa05g2001.1

…H_293_333 | GO:0003677 | GO:0003700 | GO:0005634 | GO:0006355 | DNA binding | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: BHLH84 | Seed ortholog: 337451.A0A3S3NMX9 | COG: S | eggNOG OG: HLH@3398|LS-12, HLH@58023|y-7
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
Pa05g2003Pa05g2003.1

Pa05g2003 | Pa05g2003.1 | Pa05g2003.2 | LOC104608162 | 337451.A0A443NWN4 | RRM_1@131567|PI-17 | RRM_1@2759|fg-20! | SPOC@131567|A-1* | SPOC@2759|EF-12 | S | K18667 | 03015 | 03018 | 03040 | 00001 | RRM_1_541_596 | RRM_1_713_776 | SPOC_1224_1351 | GO:0000049...

Show annotation evidence
eggNOG
Preferred name: LOC104608162 | Seed ortholog: 337451.A0A443NWN4 | COG: S | eggNOG OG: RRM_1@131567|PI-17, RRM_1@2759|fg-20!, SPOC@131567|A-1*, SPOC@2759|EF-12
GO
GO:0000049 tRNA binding; GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening; GO:0000398 mRNA splicing, via spliceosome; GO:0000723 telomere maintenance; GO:0000785 chromatin; GO:0000932 P-body; GO:0001514 selenocysteine incorporation; GO:0001556 oocyte maturation; GO:0002119 nematode larval development; GO:0003674 molecular_function; GO:0003676 nucleic acid binding; GO:0003682 chromatin binding; GO...
KEGG
KO: K18667 | Pathway: 03015, 03018, 03040 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa05g2033Pa05g2033.1

…hibition of non-skeletal tissue mineralization | cAMP/PKA signal transduction | ATF1-ATF4 transcription factor complex | positive regulation of seed maturation

Show annotation evidence
eggNOG
Preferred name: LOC103707533 | Seed ortholog: 337451.A0A3S3MFY9 | COG: S | eggNOG OG: bZIP_1@131567|iz-20, bZIP_1@1437183|Dhb-34, bZIP_1@33090|BLk-28, bZIP_1@3398|BcX-29
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000785 chromatin; GO:0001756 somitogenesis; GO:0002240 response to molecule of oomycetes origin; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005667 transcription regulator complex; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0006006 glucose metabolic process; GO:0006355 regulation of DNA-templated...
KEGG
KO: K05870, K09052, K09053, K09060, K25784 | Pathway: 04022, 04024, 04148, 04151, 04152, 04211, 04261, 04380, 04612, 04668, 04710, 04713, 04714, 04725, 04728, 04911, 04915, 04916, 04918, 04922, 04924, 04925, 04926, 04927, 04928, 04931, 04934, 04935, 04962, 05016, 05020, 05030, 05031, 05034, 05152, 05161, 05163, 05165, 05166, 05167, 05202, 05203, 05207, 05215 | BRITE: 00001, 03000, 03029
eggNOGGOKEGG
eggNOG-inferred
Pa05g2036Pa05g2036.1

…velopment | pharyngeal arch artery morphogenesis | RNA polymerase II-specific DNA-binding transcription factor binding | DNA polymerase binding | lens fiber cell development | regulation of G0 to G1 transition | dendrite guidance | cellular response to glucose stimulus | npBAF complex | nBAF complex…

Show annotation evidence
eggNOG
Preferred name: LOC104609045 | Seed ortholog: 56857.A0A200PSK6 | COG: S | eggNOG OG: QLQ@2759|A-1, QLQ@3193|K-4, QLQ@3398|DM-11, WRC@131221|EO-13, WRC@131567|A-1*, WRC@33090|e-6, WRC@3398|No-19
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000182 rDNA binding; GO:0000776 kinetochore; GO:0000785 chromatin; GO:0000791 euchromatin; GO:0000902 cell morphogenesis; GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA...
KEGG
KO: K11647, K11786 | Pathway: 03082, 04714, 05225 | BRITE: 00001, 03021, 03036
eggNOGGOKEGG
eggNOG-inferred
Pa05g2039Pa05g2039.1

…37 | GO:1905392 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | gamete generation | maintenance of shoot apical meristem identity | positive regulation of auxin biosynthe…

Show annotation evidence
eggNOG
Preferred name: ANT | Seed ortholog: 337451.A0A3S3N094 | COG: S | eggNOG OG: AP2@131567|Eo-12, AP2@3193|Aps-24, AP2@33090|Xs-18, AP2@3398|GkU-33
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0007276 gamete generation; GO:0010492 maintenance of shoot apical meristem identity; GO:0010601 positive regulation of auxin biosynthetic process; GO:0019760 glucosinolate...
KEGG
KO: K09285 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred

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