Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046
West Indian T2T annotations
3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

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2,385 genes for “transcription factor”

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SelectGeneMatched annotationEvidenceActions
Pa04g1968Pa04g1968.1

…GO:0043565 | GO:0045792 | GO:0045893 | GO:0048281 | GO:1901002 | GO:1902584 | DNA-binding transcription factor activity | nucleus | leaf morphogenesis | sequence-specific DNA binding | negative regulation of cell size | positive regulation of DNA-templated transcription | inflorescence morphogenesis…

Show annotation evidence
eggNOG
Preferred name: ANAC094 | Seed ortholog: 337451.A0A3S3NEE1 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|ob-16, NAM@3398|wm-17, NAM@35493|AE-6
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009965 leaf morphogenesis; GO:0043565 sequence-specific DNA binding; GO:0045792 negative regulation of cell size; GO:0045893 positive regulation of DNA-templated transcription; GO:0048281 inflorescence morphogenesis; GO:1901002 positive regulation of response to salt stress; GO:1902584 positive regulation of response to water deprivation
eggNOGGO
eggNOG-inferred
Pa04g1997Pa04g1997.1

…latory region binding | cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription | response to nitrate | nitrate assimilation | response to nitrate starvation | energy homeostasis

Show annotation evidence
eggNOG
Preferred name: NLP1 | Seed ortholog: 337451.A0A3S3NED0 | COG: S | eggNOG OG: PB1@131567|A-1*, PB1@1437183|AjO-26, PB1@2759|Al-8!, PB1@3193|sP-22, RWP-RK@131567|Fy-13, RWP-RK@33090|af-25
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010167 response to nitrate; GO:0042128 nitrate assimilation; GO:0090548 response to nitrate starvation; GO:0097009 energy homeostasis
KEGG
KO: K13422 | Pathway: 04016, 04075 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa04g2081Pa04g2081.1

Pa04g2081 | Pa04g2081.1 | Pa04g2081.2 | RRP44A | 337451.A0A443PIF9 | OB_Dis3@131567|C-2 | OB_Dis3@2759|Bo-9 | PIN_4@131567|CT-9 | RNB@131567|B-2 | RNB@2759|gW-22 | Rrp44_CSD1@131567|A-1* | Rrp44_CSD1@2759|e-6 | Rrp44_S1@131567|A-1* | Rrp44_S1@2759|C-2 |...

Show annotation evidence
eggNOG
Preferred name: RRP44A | Seed ortholog: 337451.A0A443PIF9 | COG: COG0557 | eggNOG OG: OB_Dis3@131567|C-2, OB_Dis3@2759|Bo-9, PIN_4@131567|CT-9, RNB@131567|B-2, RNB@2759|gW-22, Rrp44_CSD1@131567|A-1*, Rrp44_CSD1@2759|e-6, Rrp44_S1@131567|A-1*, Rrp44_S1@2759|C-2
GO
GO:0000049 tRNA binding; GO:0000175 3'-5'-RNA exonuclease activity; GO:0000278 mitotic cell cycle; GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; GO:0000465 exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000467 exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic...
KEGG
KO: K12585 | Pathway: 03018 | BRITE: 00001, 03019
eggNOGGOKEGG
eggNOG-inferred
Pa04g2091Pa04g2091.1

…9|Nx-17 | S | Myb_DNA-binding_73_118 | GO:0003700 | GO:0005634 | GO:0005829 | DNA-binding transcription factor activity | nucleus | cytosol

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eggNOG
Preferred name: RL6 | Seed ortholog: 337451.A0A3S3P0P3 | COG: S | eggNOG OG: Myb_DNA-binding@131567|KR-16, Myb_DNA-binding@2759|Nx-17
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005829 cytosol
eggNOGGO
eggNOG-inferred
Pa04g2120Pa04g2120.1

…binding | cis-regulatory region sequence-specific DNA binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | regulation of DNA-templated transcription | circadian rhythm | response to heat | response to cold | response to blue light | auxin-activa…

Show annotation evidence
eggNOG
Preferred name: LOC108988117 | Seed ortholog: 337451.A0A443PID9 | COG: S | eggNOG OG: Myb_DNA-binding@131567|uI-23, Myb_DNA-binding@2759|yY-24, Myb_DNA-binding@58023|Lhv-44
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0009408 response to heat; GO:0009409 response to cold; GO...
KEGG
EC: ec:3.4.21.102 | KO: K03797, K11314, K12133, K12134, K15127 | Pathway: 04712 | BRITE: 00001, 01000, 01002, 03000, 03021, 03036
eggNOGGOKEGG
eggNOG-inferred
Pa04g2129Pa04g2129.1

…634 | GO:0090602 | GO:0090603 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | sieve element enucleation | sieve element differentiation

Show annotation evidence
eggNOG
Preferred name: LOC104606950 | Seed ortholog: 337451.A0A3S3NMB0 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@1437183|ECT-30, NAM@3193|pA-16, NAM@3398|Azx-22, NAM@35493|AE-6
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0090602 sieve element enucleation; GO:0090603 sieve element differentiation
eggNOGGO
eggNOG-inferred
Pa04g2134Pa04g2134.1

Pa04g2134 | Pa04g2134.1 | Pa04g2134.2 | SDG40 | 337451.A0A443PIB9 | Rubis-subs-bind@131567|d-5 | SET@131567|BL-7 | SET@2759|AOr-18 | S | ec:2.1.1.127 | ec:2.1.1.259 | ec:2.1.1.364 | ec:2.1.1.85 | K00592 | K05302 | K07399 | K19199 | K27277 | K27349 | 00001 |...

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eggNOG
Preferred name: SDG40 | Seed ortholog: 337451.A0A443PIB9 | COG: S | eggNOG OG: Rubis-subs-bind@131567|d-5, SET@131567|BL-7, SET@2759|AOr-18
GO
GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0005515 protein binding; GO:0006338 chromatin remodeling; GO:0008150 biological_process; GO:0009416 response to light stimulus; GO:0009507 chloroplast; GO:0009658 chloroplast organization; GO:0009735 response to cytokinin; GO:0010027 thylakoid membrane organization; GO:0016279 protein-lysine N-methyltransferase activity; GO:0018023 peptidyl-lysine...
KEGG
EC: ec:2.1.1.127, ec:2.1.1.259, ec:2.1.1.364, ec:2.1.1.85 | KO: K00592, K05302, K07399, K19199, K27277, K27349 | BRITE: 00001, 01000, 03009, 03036, 04812
eggNOGGOKEGG
eggNOG-inferred
Pa04g2135Pa04g2135.1

…638 | GO:0045893 | GO:1900056 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | signal transduction | circadian rhythm | chloroplast organization | negative regulation of flower development | regulation of chlorophyll …

Show annotation evidence
eggNOG
Preferred name: MYBR14 | Seed ortholog: 337451.A0A443PIC1 | COG: S | eggNOG OG: Myb_DNA-binding@131567|dl-20, Myb_DNA-binding@1437183|CtC-35, Myb_DNA-binding@2759|pK-22, Myb_DNA-binding@3193|BFB-31, Myb_DNA-binding@33090|Adt-29, Myb_DNA-binding@58023|CQy-34
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0007165 signal transduction; GO:0007623 circadian rhythm; GO:0009658 chloroplast organization; GO:0009910 negative regulation of flower development; GO:0010380 regulation of chlorophyll biosynthetic process; GO:0010638 positive...
eggNOGGO
eggNOG-inferred
Pa04g2140Pa04g2140.1

…638 | GO:0045893 | GO:1900056 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | signal transduction | circadian rhythm | chloroplast organization | negative regulation of flower development | regulation of chlorophyll …

Show annotation evidence
eggNOG
Preferred name: MYBR14 | Seed ortholog: 337451.A0A443PIC1 | COG: S | eggNOG OG: Myb_DNA-binding@131567|dl-20, Myb_DNA-binding@1437183|CtC-35, Myb_DNA-binding@2759|pK-22, Myb_DNA-binding@3193|BFB-31, Myb_DNA-binding@33090|Adt-29, Myb_DNA-binding@58023|CQy-34
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0007165 signal transduction; GO:0007623 circadian rhythm; GO:0009658 chloroplast organization; GO:0009910 negative regulation of flower development; GO:0010380 regulation of chlorophyll biosynthetic process; GO:0010638 positive...
eggNOGGO
eggNOG-inferred
Pa04g2145Pa04g2145.1

…565 | GO:0045893 | GO:0048364 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | asymmetric cell division | sequence-specific DNA binding | positive regulation of DNA-templated transcript…

Show annotation evidence
eggNOG
Preferred name: LOC104606980 | Seed ortholog: 337451.A0A3S3PH57 | COG: S | eggNOG OG: zf-C2H2@131567|qO-18, zf-C2H2@2759|AFG-19, zf-C2H2@3193|IJs-30, zf-C2H2@58023|JjW-31
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008356 asymmetric cell division; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0048364 root development
KEGG
KO: K25870 | Pathway: 04391, 05168 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa04g2175Pa04g2175.1

…ng chaperone binding | misfolded protein binding | RNA polymerase II-specific DNA-binding transcription factor binding | secretory vesicle | protein sequestering activity | ATP-dependent protein folding chaperone

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eggNOG
Preferred name: LOC116193380 | Seed ortholog: 1590841.A0A2R6QL34 | COG: COG0443 | eggNOG OG: HSP70@131567|MV-14, HSP70@35493|Nbu-48, HSP70@58023|PJo-50
GO
GO:0000304 response to singlet oxygen; GO:0005509 calcium ion binding; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005788 endoplasmic reticulum lumen; GO:0006457 protein folding; GO:0009408 response to heat; GO:0009507 chloroplast; GO:0009860 pollen tube growth; GO:0015450 protein-transporting ATPase activity; GO:0016592 mediator complex; GO:0016887 ATP hydrolysis activity; GO:0019899 enzyme binding;...
KEGG
EC: ec:3.6.4.10 | KO: K09490 | Pathway: 03060, 04141 | BRITE: 00001, 01000, 03110, 04131, 04147
eggNOGGOKEGG
eggNOG-inferred
Pa04g2191Pa04g2191.1

…733 | GO:0009908 | GO:0010154 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to auxin | flower development | fruit development

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eggNOG
Preferred name: ARF12 | Seed ortholog: 337451.A0A443PI93 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|xW-20, AUX_IAA@3398|Aet-24, Auxin_resp@131221|y-7, Auxin_resp@131567|A-1*, Auxin_resp@2759|O-4, Auxin_resp@3193|Aa-8, Auxin_resp@3398|Ch-11, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AqU-23, B3@33090|Id-12, B3@3398|BOY-25
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009733 response to auxin; GO:0009908 flower development; GO:0010154 fruit development
KEGG
KO: K14486 | Pathway: 04075 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa04g2203Pa04g2203.1

Pa04g2203 | Pa04g2203.1 | ELF1 | 337451.A0A443PI70 | Elf1@131567|A-1 | COG4888 | K25829 | 00001 | 03400 | Elf1_2_78 | GO:0000993 | GO:0003674 | GO:0003677 | GO:0003711 | GO:0005515 | GO:0005575 | GO:0005634 | GO:0005694 | GO:0005730 | GO:0006283 | GO...

Show annotation evidence
eggNOG
Preferred name: ELF1 | Seed ortholog: 337451.A0A443PI70 | COG: COG4888 | eggNOG OG: Elf1@131567|A-1
GO
GO:0000993 RNA polymerase II complex binding; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003711 transcription elongation factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005694 chromosome; GO:0005730 nucleolus; GO:0006283 transcription-coupled nucleotide-excision repair; GO:0006325 chromatin organization; GO:0006355 regulation of DNA-templated...
KEGG
KO: K25829 | BRITE: 00001, 03400
eggNOGGOKEGG
eggNOG-inferred
Pa04g2220Pa04g2220.1

…355 | GO:0009637 | GO:0009911 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to blue light | positive regulation of flower development

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eggNOG
Preferred name: BHLH49 | Seed ortholog: 337451.A0A443PW54 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@1437183|ODO-37, HLH@3193|Hds-32, HLH@33090|AbH-19, HLH@3398|Jxn-34
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009637 response to blue light; GO:0009911 positive regulation of flower development
eggNOGGO
eggNOG-inferred
Pa04g2228Pa04g2228.1

…ing | RNA polymerase II cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity, RNA polymerase II-specific | DNA-binding transcription repressor activity, RNA polymerase II-specific | DNA binding | chromatin binding | DNA-binding transcription factor activity…

Show annotation evidence
eggNOG
Preferred name: ILR3 | Seed ortholog: 337451.A0A443PI60 | COG: S | eggNOG OG: HLH@131567|BWE-22, HLH@3398|Izc-33
GO
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding...
KEGG
KO: K09114, K09115 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa04g2308Pa04g2308.1

…65 | GO:0048578 | GO:0140537 | DNA-binding transcription activator activity | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | regulation of circadian rhythm | positive regulation of circadian rhythm | sequence-specific DNA binding |…

Show annotation evidence
eggNOG
Preferred name: TCP7 | Seed ortholog: 337451.A0A443PHZ8 | COG: S | eggNOG OG: TCP@131221|AC-7, TCP@131567|A-1*, TCP@2759|G-3, TCP@3193|DK-11, TCP@3398|EV-12
GO
GO:0001216 DNA-binding transcription activator activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0042752 regulation of circadian rhythm; GO:0042753 positive regulation of circadian rhythm; GO:0043565 sequence-specific DNA binding; GO:0048578 positive regulation of long-day photoperiodism,...
KEGG
KO: K16221 | Pathway: 04712 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa04g2326Pa04g2326.1

…60 | GO:0042790 | GO:0042797 | RNA polymerase IV complex | fibrillar center | DNA-binding transcription factor activity | DNA-directed RNA polymerase activity | RNA-directed RNA polymerase activity | protein binding | cellular_component | nucleus | nucleoplasm | RNA polymerase II, core complex | RNA…

Show annotation evidence
eggNOG
Preferred name: 25498670 | Seed ortholog: 42345.A0A2H3ZER3 | COG: COG1996 | eggNOG OG: DNA_RNApol_7kD@131567|A-1
GO
GO:0000418 RNA polymerase IV complex; GO:0001650 fibrillar center; GO:0003700 DNA-binding transcription factor activity; GO:0003899 DNA-directed RNA polymerase activity; GO:0003968 RNA-directed RNA polymerase activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005665 RNA polymerase II, core complex; GO:0005666 RNA polymerase III complex; GO:0005730...
KEGG
KO: K03009 | Pathway: 03020, 03420 | BRITE: 00001, 01611, 03021, 03400
eggNOGGOKEGG
eggNOG-inferred
Pa04g2334Pa04g2334.1

…001 | GO:1901371 | GO:1905615 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to water deprivation | response to salt stress | response to gibberellin | response to salicylic …

Show annotation evidence
eggNOG
Preferred name: DIVARICATA | Seed ortholog: 337451.A0A3S3NE26 | COG: S | eggNOG OG: Myb_DNA-binding@131567|uC-23, Myb_DNA-binding@33090|ItR-42, Myb_DNA-binding@58023|NbR-46
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009651 response to salt stress; GO:0009739 response to gibberellin; GO:0009751 response to salicylic acid; GO:0009787 regulation of abscisic acid-activated...
KEGG
KO: K22560, K23406, K24536 | Pathway: 03082 | BRITE: 00001, 03036, 04121
eggNOGGOKEGG
eggNOG-inferred
Pa04g2337Pa04g2337.1

…001 | GO:1901371 | GO:1905615 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to water deprivation | response to salt stress | response to gibberellin | response to salicylic …

Show annotation evidence
eggNOG
Preferred name: DIVARICATA | Seed ortholog: 337451.A0A443PHY0 | COG: S | eggNOG OG: Myb_DNA-binding@131567|uC-23, Myb_DNA-binding@33090|ItR-42, Myb_DNA-binding@58023|NbR-46
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009651 response to salt stress; GO:0009739 response to gibberellin; GO:0009751 response to salicylic acid; GO:0009787 regulation of abscisic acid-activated...
KEGG
KO: K22560, K23406, K24536 | Pathway: 03082 | BRITE: 00001, 03036, 04121
eggNOGGOKEGG
eggNOG-inferred
Pa04g2384Pa04g2384.1

… DNA binding | ATPase activator activity | molecular_function | DNA binding | DNA-binding transcription factor activity | RNA binding | protein tyrosine kinase activity | protein binding | cellular_component | nucleus | nucleoplasm | chromatin silencing complex | chromosome | polytene chromosome | p…

Show annotation evidence
eggNOG
Preferred name: MAH20.19 | Seed ortholog: 337451.A0A3S3PGY1 | COG: S | eggNOG OG: DDT@131567|U-5, WAC_Acf1_DNA_bd@2759|A-1, WHIM1@131567|C-2, WHIM1@2759|BK-8, WSD@131567|A-1*, WSD@2759|BF-8!
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000183 rDNA heterochromatin formation; GO:0000228 nuclear chromosome; GO:0000785 chromatin; GO:0000793 condensed chromosome; GO:0000976 transcription cis-regulatory region binding; GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding; GO:0001671 ATPase activator activity; GO:0003674 molecular_function; GO:0003677 DNA...
KEGG
EC: ec:2.3.1.48 | KO: K11655, K11658, K15224, K22768, K26167 | Pathway: 03082 | BRITE: 00001, 01000, 03021, 03036
eggNOGGOKEGG
eggNOG-inferred
Pa04g2415Pa04g2415.1

…0090397 | cis-regulatory region sequence-specific DNA binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | seed coat development | protein dimerization activity | seed development | carpel development | plant ovul…

Show annotation evidence
eggNOG
Preferred name: AG2 | Seed ortholog: 337451.A0A3S3QTR5 | COG: S | eggNOG OG: K-box@131221|b-5, K-box@131567|A-1*, K-box@2759|O-4, K-box@3398|Mi-13, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|BXL-27, SRF-TF@35493|jY-20
GO
GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010214 seed coat development; GO:0046983 protein dimerization activity; GO:0048316 seed development; GO:0048440 carpel development; GO:0048481 plant ovule development;...
KEGG
KO: K09264 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa04g2416Pa04g2416.1

…0008150 | condensed chromosome | condensed nuclear chromosome | DNA binding | DNA-binding transcription factor activity | nucleus | biological_process

Show annotation evidence
eggNOG
Preferred name: HMGB13 | Seed ortholog: 337451.A0A3S3N1A8 | COG: S | eggNOG OG: HMG_box@131567|Aj-7, HMG_box@2759|Of-14
GO
GO:0000793 condensed chromosome; GO:0000794 condensed nuclear chromosome; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0008150 biological_process
KEGG
EC: ec:2.1.1.354 | KO: K09273 | Pathway: 00310, 01100 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
Pa04g2417Pa04g2417.1

…0008150 | condensed chromosome | condensed nuclear chromosome | DNA binding | DNA-binding transcription factor activity | nucleus | biological_process

Show annotation evidence
eggNOG
Preferred name: HMGB13 | Seed ortholog: 337451.A0A3S3N1A8 | COG: S | eggNOG OG: HMG_box@131567|Aj-7, HMG_box@2759|Of-14
GO
GO:0000793 condensed chromosome; GO:0000794 condensed nuclear chromosome; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0008150 biological_process
KEGG
EC: ec:2.1.1.354 | KO: K09273 | Pathway: 00310, 01100 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
Pa04g2422Pa04g2422.1

…F-TF_10_56 | GO:0003700 | GO:0005515 | GO:0005634 | GO:0010228 | GO:0048364 | DNA-binding transcription factor activity | protein binding | nucleus | vegetative to reproductive phase transition of meristem | root development

Show annotation evidence
eggNOG
Preferred name: AGL12 | Seed ortholog: 337451.A0A3S3MY59, 337451.A0A443PHT8 | COG: S | eggNOG OG: K-box@131567|A-1*, K-box@1437183|Bb-8, K-box@2759|v-6, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3193|so-21, SRF-TF@3398|APQ-23, SRF-TF@35493|bP-19
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0010228 vegetative to reproductive phase transition of meristem; GO:0048364 root development
KEGG
KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021, 04131
eggNOGGOKEGG
eggNOG-inferred
Pa04g2444Pa04g2444.1

…620 | GO:0042631 | GO:0070482 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | cytoplasm | response to fungus | cellular response to water deprivation | response to oxygen levels

Show annotation evidence
eggNOG
Preferred name: LOC104586477 | Seed ortholog: 337451.A0A3S3P0B9 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@1437183|XO-18, AP2@3193|Nu-16, AP2@33090|Hw-14
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009620 response to fungus; GO:0042631 cellular response to water deprivation; GO:0070482 response to oxygen levels
KEGG
KO: K09286 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa04g2449Pa04g2449.1

…001 | 03000 | AP2_15_65 | GO:0003700 | GO:0005634 | GO:0060862 | GO:2000280 | DNA-binding transcription factor activity | nucleus | negative regulation of floral organ abscission | regulation of root development

Show annotation evidence
eggNOG
Preferred name: ERF021 | Seed ortholog: 337451.A0A3S3N197 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@33090|KR-15, AP2@58023|Ww-18
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0060862 negative regulation of floral organ abscission; GO:2000280 regulation of root development
KEGG
KO: K09286 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa04g2456Pa04g2456.1

…GO:0003723 | GO:0005515 | GO:0005737 | GO:0006355 | GO:1900057 | GO:2000028 | DNA-binding transcription factor activity | RNA binding | protein binding | cytoplasm | regulation of DNA-templated transcription | positive regulation of leaf senescence | regulation of photoperiodism, flowering

Show annotation evidence
eggNOG
Preferred name: LOC101771527 | Seed ortholog: 337451.A0A443PHS5 | COG: COG1094 | eggNOG OG: KH_1@131567|B-2, KH_1@2759|AR-7, KH_1@3398|iC-17, KH_1@35493|Lh-13
GO
GO:0003700 DNA-binding transcription factor activity; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:1900057 positive regulation of leaf senescence; GO:2000028 regulation of photoperiodism, flowering
KEGG
KO: K13210 | BRITE: 00001, 03019, 03041
eggNOGGOKEGG
eggNOG-inferred
Pa04g2488Pa04g2488.1

…molecular_function | nucleic acid binding | DNA binding | chromatin binding | DNA-binding transcription factor activity | transcription coactivator activity | transcription corepressor activity | histone acetyltransferase activity | enzyme inhibitor activity | protein binding | cellular_component | …

Show annotation evidence
eggNOG
Preferred name: KDM5A | Seed ortholog: 337451.A0A3S4PGV6 | COG: S | eggNOG OG: PHD@131567|A-1*, PHD@2759|Vu-13
GO
GO:0000118 histone deacetylase complex; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000183 rDNA heterochromatin formation; GO:0000212 meiotic spindle organization; GO:0000278 mitotic cell cycle; GO:0000785 chromatin; GO:0000791 euchromatin; GO:0000812 Swr1 complex; GO:0000976 transcription cis-regulatory region binding; GO:0001650 fibrillar center; GO:0002040 sprouting angiogenesis;...
KEGG
EC: ec:1.14.11.65, ec:1.14.11.67, ec:2.3.2.27, ec:3.1.3.16 | KO: K26271 | Pathway: 03022 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa04g2500Pa04g2500.1

… 00001 | zf-B_box_53_95 | GO:0003700 | GO:0005515 | GO:0005634 | GO:0006355 | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: LOC104593908 | Seed ortholog: 337451.A0A443PHM4 | COG: S | eggNOG OG: zf-B_box@2759|B-2!, zf-B_box@33090|l-7, zf-B_box@3398|Jo-15, zf-B_box@35493|CE-11
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
KEGG
KO: K12135 | Pathway: 04712 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa04g2510Pa04g2510.1

Pa04g2510 | Pa04g2510.1 | LOC108999108 | 337451.A0A3S3N8H0 | PG_binding_1@131221|FqU-29 | PG_binding_1@131567|e-5 | PG_binding_1@1437183|GaX-30 | PG_binding_1@2759|ABO-15 | Peptidase_M10@131567|AY-8 | Peptidase_M10@1437183|AQW-28 | Peptidase_M10@58023|tP-24...

Show annotation evidence
eggNOG
Preferred name: LOC108999108 | Seed ortholog: 337451.A0A3S3N8H0 | COG: S | eggNOG OG: PG_binding_1@131221|FqU-29, PG_binding_1@131567|e-5, PG_binding_1@1437183|GaX-30, PG_binding_1@2759|ABO-15, Peptidase_M10@131567|AY-8, Peptidase_M10@1437183|AQW-28, Peptidase_M10@58023|tP-24
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000139 Golgi membrane; GO:0001046 core promoter sequence-specific DNA binding; GO:0001501 skeletal system development; GO:0001503 ossification; GO:0001525 angiogenesis; GO:0001541 ovarian follicle development; GO:0001542 ovulation from ovarian follicle; GO:0001553 luteinization; GO:0001554 luteolysis; GO:0001649 osteoblast differentiation;...
KEGG
EC: ec:3.4.24.12, ec:3.4.24.17, ec:3.4.24.22, ec:3.4.24.23, ec:3.4.24.24, ec:3.4.24.34, ec:3.4.24.35, ec:3.4.24.65, ec:3.4.24.7, ec:3.4.24.80 | KO: K01388, K01394, K01396, K01397, K01398, K01402, K01403, K01413, K07763, K07994, K07995, K07996, K07997, K07998, K07999, K08002, K08003, K08005, K08006, K19957 | Pathway: 01522, 03320, 04310, 04657, 04668, 04670, 04912, 04915, 04926, 04928, 04933, 05161, 05166, 05171,...
eggNOGGOKEGG
eggNOG-inferred

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