Functional Annotation Search

Functional discovery

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Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046: West Indian T2T annotations
3+: indexed evidence types

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2,385 genes for “transcription factor”

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Select	Gene	Matched annotation	Evidence	Actions
Select Pa03g2985	Pa03g2985`Pa03g2985.1`	Pa03g2985 \| Pa03g2985.1 \| LOC110783581 \| 337451.A0A443NEX1 \| Cation_ATPase_C@131567\|CF-13 \| Cation_ATPase_C@1437183\|Bfv-35 \| Cation_ATPase_C@3193\|AbH-32 \| Cation_ATPase_C@35493\|AAv-30 \| Cation_ATPase_N@131567\|z-7 \| Cation_ATPase_N@1437183\|AVr-21! \| E1-E2... Show annotation evidence eggNOG Preferred name: LOC110783581 \| Seed ortholog: 337451.A0A443NEX1 \| COG: S \| eggNOG OG: Cation_ATPase_C@131567\|CF-13, Cation_ATPase_C@1437183\|Bfv-35, Cation_ATPase_C@3193\|AbH-32, Cation_ATPase_C@35493\|AAv-30, Cation_ATPase_N@131567\|z-7, Cation_ATPase_N@1437183\|AVr-21!, E1-E2_ATPase@131221\|KhZ-42, E1-E2_ATPase@131567\|Ow-19, E1-E2_ATPase@1437183\|ZGi-50, E1-E2_ATPase@35493\|Ekd-37 GO GO:0000139 Golgi membrane; GO:0000902 cell morphogenesis; GO:0001818 negative regulation of cytokine production; GO:0002119 nematode larval development; GO:0003056 regulation of vascular associated smooth muscle contraction; GO:0003407 neural retina development; GO:0005388 P-type calcium transporter activity; GO:0006357 regulation of transcription by RNA polymerase II; GO:0006816 calcium ion transport; GO:0006874... KEGG EC: ec:7.2.2.10 \| KO: K01537 \| Pathway: 04020, 04022, 04024, 04261, 04925, 04961, 04970, 04972, 04978 \| BRITE: 00001, 01000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g2994	Pa03g2994`Pa03g2994.1`	…ing \| RNA polymerase II cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription factor activity, RNA polymerase II-specific \| cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription repressor activity, RNA polymerase II-specific \| DNA-binding transcrip… Show annotation evidence eggNOG Preferred name: AGL82 \| Seed ortholog: 337451.A0A443PXR5 \| COG: S \| eggNOG OG: SRF-TF@131567\|A-1*, SRF-TF@1437183\|JX-16!, SRF-TF@2759\|C-2!, SRF-TF@3398\|EM-14 GO GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0000900 mRNA regulatory element binding translation repressor activity; GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase... KEGG KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 \| Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 \| BRITE: 00001, 03000, 03021, 04131	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g2996	Pa03g2996`Pa03g2996.1`	Pa03g2996 \| Pa03g2996.1 \| LOC110783581 \| 337451.A0A443NEX1 \| Cation_ATPase_C@131567\|CF-13 \| Cation_ATPase_C@1437183\|Bfv-35 \| Cation_ATPase_C@3193\|AbH-32 \| Cation_ATPase_C@35493\|AAv-30 \| Cation_ATPase_N@131567\|z-7 \| Cation_ATPase_N@1437183\|AVr-21! \| E1-E2... Show annotation evidence eggNOG Preferred name: LOC110783581 \| Seed ortholog: 337451.A0A443NEX1 \| COG: S \| eggNOG OG: Cation_ATPase_C@131567\|CF-13, Cation_ATPase_C@1437183\|Bfv-35, Cation_ATPase_C@3193\|AbH-32, Cation_ATPase_C@35493\|AAv-30, Cation_ATPase_N@131567\|z-7, Cation_ATPase_N@1437183\|AVr-21!, E1-E2_ATPase@131221\|KhZ-42, E1-E2_ATPase@131567\|Ow-19, E1-E2_ATPase@1437183\|ZGi-50, E1-E2_ATPase@35493\|Ekd-37 GO GO:0000139 Golgi membrane; GO:0000902 cell morphogenesis; GO:0001818 negative regulation of cytokine production; GO:0002119 nematode larval development; GO:0003056 regulation of vascular associated smooth muscle contraction; GO:0003407 neural retina development; GO:0005388 P-type calcium transporter activity; GO:0006357 regulation of transcription by RNA polymerase II; GO:0006816 calcium ion transport; GO:0006874... KEGG EC: ec:7.2.2.10 \| KO: K01537 \| Pathway: 04020, 04022, 04024, 04261, 04925, 04961, 04970, 04972, 04978 \| BRITE: 00001, 01000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g2997	Pa03g2997`Pa03g2997.1`	Pa03g2997 \| Pa03g2997.1 \| Pa03g2997.2 \| LOC110783581 \| 337451.A0A3S4Q1T9 \| Cation_ATPase_C@131567\|CF-13 \| Cation_ATPase_C@1437183\|Bfv-35 \| Cation_ATPase_C@3193\|AbH-32 \| Cation_ATPase_C@35493\|AAv-30 \| Cation_ATPase_N@131567\|z-7 \| Cation_ATPase_N@1437183\|AVr... Show annotation evidence eggNOG Preferred name: LOC110783581 \| Seed ortholog: 337451.A0A3S4Q1T9 \| COG: S \| eggNOG OG: Cation_ATPase_C@131567\|CF-13, Cation_ATPase_C@1437183\|Bfv-35, Cation_ATPase_C@3193\|AbH-32, Cation_ATPase_C@35493\|AAv-30, Cation_ATPase_N@131567\|z-7, Cation_ATPase_N@1437183\|AVr-21!, E1-E2_ATPase@131221\|KhZ-42, E1-E2_ATPase@131567\|Ow-19, E1-E2_ATPase@1437183\|ZGi-50, E1-E2_ATPase@35493\|Ekd-37 GO GO:0000139 Golgi membrane; GO:0000902 cell morphogenesis; GO:0001818 negative regulation of cytokine production; GO:0002119 nematode larval development; GO:0003056 regulation of vascular associated smooth muscle contraction; GO:0003407 neural retina development; GO:0005388 P-type calcium transporter activity; GO:0006357 regulation of transcription by RNA polymerase II; GO:0006816 calcium ion transport; GO:0006874... KEGG EC: ec:7.2.2.10 \| KO: K01537 \| Pathway: 04020, 04022, 04024, 04261, 04925, 04961, 04970, 04972, 04978 \| BRITE: 00001, 01000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g2998	Pa03g2998`Pa03g2998.1`	Pa03g2998 \| Pa03g2998.1 \| LOC110783581 \| 337451.A0A3S4Q1T9 \| Cation_ATPase_C@131567\|CF-13 \| Cation_ATPase_C@1437183\|Bfv-35 \| Cation_ATPase_C@3193\|AbH-32 \| Cation_ATPase_C@35493\|AAv-30 \| Cation_ATPase_N@131567\|z-7 \| Cation_ATPase_N@1437183\|AVr-21! \| E1-E2... Show annotation evidence eggNOG Preferred name: LOC110783581 \| Seed ortholog: 337451.A0A3S4Q1T9 \| COG: S \| eggNOG OG: Cation_ATPase_C@131567\|CF-13, Cation_ATPase_C@1437183\|Bfv-35, Cation_ATPase_C@3193\|AbH-32, Cation_ATPase_C@35493\|AAv-30, Cation_ATPase_N@131567\|z-7, Cation_ATPase_N@1437183\|AVr-21!, E1-E2_ATPase@131221\|KhZ-42, E1-E2_ATPase@131567\|Ow-19, E1-E2_ATPase@1437183\|ZGi-50, E1-E2_ATPase@35493\|Ekd-37 GO GO:0000139 Golgi membrane; GO:0000902 cell morphogenesis; GO:0001818 negative regulation of cytokine production; GO:0002119 nematode larval development; GO:0003056 regulation of vascular associated smooth muscle contraction; GO:0003407 neural retina development; GO:0005388 P-type calcium transporter activity; GO:0006357 regulation of transcription by RNA polymerase II; GO:0006816 calcium ion transport; GO:0006874... KEGG EC: ec:7.2.2.10 \| KO: K01537 \| Pathway: 04020, 04022, 04024, 04261, 04925, 04961, 04970, 04972, 04978 \| BRITE: 00001, 01000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g2999	Pa03g2999`Pa03g2999.1`	Pa03g2999 \| Pa03g2999.1 \| LOC110783581 \| 337451.A0A3S4Q1T9 \| Cation_ATPase_C@131567\|CF-13 \| Cation_ATPase_C@1437183\|Bfv-35 \| Cation_ATPase_C@3193\|AbH-32 \| Cation_ATPase_C@35493\|AAv-30 \| Cation_ATPase_N@131567\|z-7 \| Cation_ATPase_N@1437183\|AVr-21! \| E1-E2... Show annotation evidence eggNOG Preferred name: LOC110783581 \| Seed ortholog: 337451.A0A3S4Q1T9 \| COG: S \| eggNOG OG: Cation_ATPase_C@131567\|CF-13, Cation_ATPase_C@1437183\|Bfv-35, Cation_ATPase_C@3193\|AbH-32, Cation_ATPase_C@35493\|AAv-30, Cation_ATPase_N@131567\|z-7, Cation_ATPase_N@1437183\|AVr-21!, E1-E2_ATPase@131221\|KhZ-42, E1-E2_ATPase@131567\|Ow-19, E1-E2_ATPase@1437183\|ZGi-50, E1-E2_ATPase@35493\|Ekd-37 GO GO:0000139 Golgi membrane; GO:0000902 cell morphogenesis; GO:0001818 negative regulation of cytokine production; GO:0002119 nematode larval development; GO:0003056 regulation of vascular associated smooth muscle contraction; GO:0003407 neural retina development; GO:0005388 P-type calcium transporter activity; GO:0006357 regulation of transcription by RNA polymerase II; GO:0006816 calcium ion transport; GO:0006874... KEGG EC: ec:7.2.2.10 \| KO: K01537 \| Pathway: 04020, 04022, 04024, 04261, 04925, 04961, 04970, 04972, 04978 \| BRITE: 00001, 01000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3009	Pa03g3009`Pa03g3009.1`	… \| cellular response to potassium ion starvation \| seed trichome elongation \| DNA-binding transcription factor binding Show annotation evidence eggNOG Preferred name: LOC103715337 \| Seed ortholog: 4432.A0A1U8ALH4 \| COG: S \| eggNOG OG: 14-3-3@131567\|C-2!, 14-3-3@3398\|mZ-42 GO GO:0000325 plant-type vacuole; GO:0003677 DNA binding; GO:0005509 calcium ion binding; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005618 cell wall; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005794 Golgi apparatus; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006995 cellular response to nitrogen starvation; GO:0007165 signal transduction; GO:0008426 protein kinase C... KEGG KO: K06630 \| BRITE: 00001, 03400, 04147	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3025	Pa03g3025`Pa03g3025.1`	…GO:0009651 \| GO:0009965 \| GO:0017148 \| GO:0042803 \| GO:0043565 \| GO:0045893 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to blue light \| response to salt stress \| leaf morphogenesis \| negative regulation of translation \| protein homodimerization activity \| seque… Show annotation evidence eggNOG Preferred name: ATHB-1 \| Seed ortholog: 337451.A0A443NEX6 \| COG: S \| eggNOG OG: HALZ@131567\|X-6, HALZ@3193\|g-7, HALZ@58023\|p-8, Homeodomain@131567\|XU-17, Homeodomain@2759\|ACU-20!, Homeodomain@3193\|GUI-31, Homeodomain@35493\|BwQ-25, Homeodomain@58023\|KGj-34 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009637 response to blue light; GO:0009651 response to salt stress; GO:0009965 leaf morphogenesis; GO:0017148 negative regulation of translation; GO:0042803 protein homodimerization activity; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription KEGG KO: K09338 \| Pathway: 04113, 04148, 04927, 04934, 05202 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3027	Pa03g3027`Pa03g3027.1`	…GO:0009651 \| GO:0009965 \| GO:0017148 \| GO:0042803 \| GO:0043565 \| GO:0045893 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to blue light \| response to salt stress \| leaf morphogenesis \| negative regulation of translation \| protein homodimerization activity \| seque… Show annotation evidence eggNOG Preferred name: ATHB-1 \| Seed ortholog: 337451.A0A3S3M4Q3 \| COG: S \| eggNOG OG: HALZ@131567\|X-6, HALZ@3193\|g-7, HALZ@58023\|p-8, Homeodomain@131567\|XU-17, Homeodomain@2759\|ACU-20!, Homeodomain@3193\|GUI-31, Homeodomain@35493\|BwQ-25, Homeodomain@58023\|KGj-34 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009637 response to blue light; GO:0009651 response to salt stress; GO:0009965 leaf morphogenesis; GO:0017148 negative regulation of translation; GO:0042803 protein homodimerization activity; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription KEGG KO: K09338 \| Pathway: 04113, 04148, 04927, 04934, 05202 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3114	Pa03g3114`Pa03g3114.1`	…\| 00001 \| 03000 \| Homeodomain_88_147 \| GO:0003700 \| GO:0005634 \| GO:0099402 \| DNA-binding transcription factor activity \| nucleus \| plant organ development Show annotation evidence eggNOG Preferred name: LOC109007483 \| Seed ortholog: 337451.A0A3S3MY44 \| COG: S \| eggNOG OG: Homeodomain@131567\|RH-16, Homeodomain@2759\|XV-17!, Homeodomain@33090\|BEn-23, Homeodomain@3398\|FYY-30 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0099402 plant organ development KEGG KO: K09299, K09357, K09378, K09379, K09380, K23560 \| Pathway: 04550, 05202, 05206, 05215 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3137	Pa03g3137`Pa03g3137.1`	…640 \| GO:0071456 \| GO:1990110 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| regulation of DNA-templated transcription \| response to heat \| red, far-red light phototransduction \| photomorphogenesis \| cellular respon… Show annotation evidence eggNOG Preferred name: CIGR2 \| Seed ortholog: 337451.A0A443NF93 \| COG: S \| eggNOG OG: GRAS@131567\|n-8, GRAS@3193\|AX-10, GRAS@3398\|GW-15 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat; GO:0009585 red, far-red light phototransduction; GO:0009640 photomorphogenesis; GO:0071456 cellular response to hypoxia; GO:1990110 callus formation KEGG KO: K27748 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3143	Pa03g3143`Pa03g3143.1`	Pa03g3143 \| Pa03g3143.1 \| LOC103707508 \| 337451.A0A443NVE3 \| FKBP_C@131567\|Oe-14 \| FKBP_C@2759\|AAG-21! \| FKBP_C@3398\|HOQ-32 \| TPR_8@131567\|Uz-14 \| TPR_8@1437183\|cUH-35 \| TPR_8@2759\|GiN-24 \| S \| ec:5.2.1.8 \| K09571 \| 00100 \| 01100 \| 01110 \| 03015 \| 04915 \|... Show annotation evidence eggNOG Preferred name: LOC103707508 \| Seed ortholog: 337451.A0A443NVE3 \| COG: S \| eggNOG OG: FKBP_C@131567\|Oe-14, FKBP_C@2759\|AAG-21!, FKBP_C@3398\|HOQ-32, TPR_8@131567\|Uz-14, TPR_8@1437183\|cUH-35, TPR_8@2759\|GiN-24 GO GO:0000086 G2/M transition of mitotic cell cycle; GO:0000413 protein peptidyl-prolyl isomerization; GO:0000724 double-strand break repair via homologous recombination; GO:0000747 conjugation with cellular fusion; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003674 molecular_function; GO:0003723 RNA binding; GO:0003755 peptidyl-prolyl cis-trans isomerase activity; GO... KEGG EC: ec:5.2.1.8 \| KO: K09571 \| Pathway: 00100, 01100, 01110, 03015, 04915 \| Module: M00101, M00917 \| BRITE: 00001, 01000, 03110	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3153	Pa03g3153`Pa03g3153.1`	…GO:0005515 \| GO:0005634 \| GO:0005829 \| GO:0009408 \| GO:0009414 \| GO:0045893 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytosol \| response to heat \| response to water deprivation \| positive regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: LOC107761037 \| Seed ortholog: 337451.A0A443NF76 \| COG: S \| eggNOG OG: CBFD_NFYB_HMF@131567\|BS-10, CBFD_NFYB_HMF@2759\|GM-15, CBFD_NFYB_HMF@33090\|Bcx-31, CBFD_NFYB_HMF@3398\|ETQ-40 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0009408 response to heat; GO:0009414 response to water deprivation; GO:0045893 positive regulation of DNA-templated transcription KEGG EC: ec:6.5.1.3 \| KO: K08065 \| Pathway: 04612, 05152, 05166 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3168	Pa03g3168`Pa03g3168.1`	…60 \| GO:2000028 \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cold acclimation \| flower development \| positive regulation of flower development \| meristem structural organization \| vernalization response \| mainte… Show annotation evidence eggNOG Preferred name: AP1 \| Seed ortholog: 337451.A0A3S3Q204 \| COG: S \| eggNOG OG: K-box@131567\|A-1, K-box@2759\|Ah-7, K-box@3398\|Cj-9, SRF-TF@131567\|A-1, SRF-TF@2759\|C-2!, SRF-TF@3193\|jV-20, SRF-TF@3398\|sl-21!, SRF-TF@35493\|bP-19 GO GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009631 cold acclimation; GO:0009908 flower development; GO:0009911 positive regulation of flower development; GO:0009933 meristem structural organization; GO:0010048 vernalization response; GO:0010077 maintenance of inflorescence... KEGG KO: K09264 \| Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3169	Pa03g3169`Pa03g3169.1`	…O:0048481 \| GO:0048833 \| GO:0080001 \| cell fate specification \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| flower development \| specification of floral organ identity \| seed coat development \| plant ovule development \| specification of floral organ number \|… Show annotation evidence eggNOG Preferred name: SEP3 \| Seed ortholog: 337451.A0A3S4NH64 \| COG: S \| eggNOG OG: K-box@131567\|A-1, K-box@2759\|Ah-7, K-box@3398\|PR-14!, SRF-TF@131567\|A-1, SRF-TF@2759\|C-2!, SRF-TF@3193\|jV-20, SRF-TF@3398\|DMa-32, SRF-TF@35493\|bP-19 GO GO:0001708 cell fate specification; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009908 flower development; GO:0010093 specification of floral organ identity; GO:0010214 seed coat development; GO:0048481 plant ovule development; GO:0048833 specification of floral organ number; GO:0080001 mucilage extrusion from seed coat KEGG KO: K09264 \| Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3173	Pa03g3173`Pa03g3173.1`	…355 \| GO:0010468 \| GO:0042742 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| regulation of gene expression \| defense response to bacterium Show annotation evidence eggNOG Preferred name: SPL6 \| Seed ortholog: 337451.A0A3S3MCB3 \| COG: S \| eggNOG OG: SBP@131567\|A-1*, SBP@3193\|S-5, SBP@33090\|I-4, SBP@58023\|EN-10 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010468 regulation of gene expression; GO:0042742 defense response to bacterium	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3174	Pa03g3174`Pa03g3174.1`	…366 \| GO:0048440 \| GO:0048479 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| polarity specification of adaxial/abaxial axis \| meristem determinacy \| specification of carpel identity \|… Show annotation evidence eggNOG Preferred name: DL \| Seed ortholog: 337451.A0A3S3Q0T2 \| COG: S \| eggNOG OG: YABBY@2759\|C-2!, YABBY@3398\|d-6 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009944 polarity specification of adaxial/abaxial axis; GO:0010022 meristem determinacy; GO:0010094 specification of carpel identity; GO:0010254 nectary development; GO:0010582 floral meristem... KEGG KO: K25796 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3194	Pa03g3194`Pa03g3194.1`	…GO:0005634 \| GO:0006355 \| GO:0009507 \| GO:0010150 \| GO:0031347 \| GO:0048366 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| chloroplast \| leaf senescence \| regulation of defense response \| leaf development Show annotation evidence eggNOG Preferred name: TCP13 \| Seed ortholog: 337451.A0A443NXJ4 \| COG: S \| eggNOG OG: TCP@131567\|A-1*, TCP@2759\|F-3, TCP@3398\|FG-13, TCP@58023\|f-6 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009507 chloroplast; GO:0010150 leaf senescence; GO:0031347 regulation of defense response; GO:0048366 leaf development	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3215	Pa03g3215`Pa03g3215.1`	…nt \| vernalization response \| Cdc73/Paf1 complex \| RNA polymerase II-specific DNA-binding transcription factor binding \| RNA polymerase II C-terminal domain phosphoserine binding Show annotation evidence eggNOG Preferred name: VIP4 \| Seed ortholog: 337451.A0A3S3MIT1 \| COG: S \| eggNOG OG: Leo1@2759\|A-1 GO GO:0003674 molecular_function; GO:0003712 transcription coregulator activity; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009910 negative regulation of flower development; GO:0010048 vernalization response; GO:0016593 Cdc73/Paf1 complex; GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding; GO:1990269 RNA polymerase II C-terminal domain phosphoserine binding KEGG KO: K15177 \| BRITE: 00001, 03021	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3227	Pa03g3227`Pa03g3227.1`	…omal large subunit binding \| ubiquitin binding \| molecular adaptor activity \| DNA-binding transcription factor binding Show annotation evidence eggNOG Preferred name: LOC101493317, LOC107933378 \| Seed ortholog: 3983.A0A2C9URN2, 51240.A0A2I4EMK7 \| COG: S \| eggNOG OG: HA2@131567\|Ay-8, HA2@1437183\|Lys-43, HA2@2759\|TJ-16, Helicase_C\|KFC4E0@2759, Helicase_C\|KFC4E0@3398, OB_NTP_bind@131567\|C-2, OB_NTP_bind@2759\|YK-17, OB_NTP_bind@3398\|CUn-30 GO GO:0000182 rDNA binding; GO:0003723 RNA binding; GO:0003724 RNA helicase activity; GO:0003725 double-stranded RNA binding; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008186 ATP-dependent activity, acting on RNA; GO:0008380 RNA splicing; GO:0009793 embryo development ending in seed dormancy; GO:0016020 membrane; GO:0035194 regulatory ncRNA-mediated post-transcriptional gene... KEGG EC: ec:5.6.2.6 \| KO: K12813 \| Pathway: 03040 \| BRITE: 00001, 01000, 03041	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3230	Pa03g3230`Pa03g3230.1`	…34_459 \| zf-C2H2_6_8_32 \| GO:0003700 \| GO:0005575 \| GO:0005634 \| GO:0006355 \| DNA-binding transcription factor activity \| cellular_component \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: ZAT9 \| Seed ortholog: 337451.A0A443NFH1 \| COG: S \| eggNOG OG: zf-C2H2_6@131567\|B-2, zf-C2H2_6@3398\|DT-12 GO GO:0003700 DNA-binding transcription factor activity; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3260	Pa03g3260`Pa03g3260.1`	Pa03g3260 \| Pa03g3260.1 \| Pa03g3260.2 \| EIF6 \| 337451.A0A3S3MYB8 \| eIF-6@131567\|A-1 \| eIF-6@1437183\|ZI-25 \| S \| K03264 \| 03008 \| 00001 \| 03009 \| 03012 \| eIF-6_77_276 \| GO:0000054 \| GO:0000463 \| GO:0000466 \| GO:0003743 \| GO:0005515 \| GO:0005575 \| GO:0005634 ... Show annotation evidence eggNOG Preferred name: EIF6 \| Seed ortholog: 337451.A0A3S3MYB8 \| COG: S \| eggNOG OG: eIF-6@131567\|A-1, eIF-6@1437183\|ZI-25 GO GO:0000054 ribosomal subunit export from nucleus; GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003743 translation initiation factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005638 lamin filament; GO... KEGG KO: K03264 \| Pathway: 03008 \| BRITE: 00001, 03009, 03012	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3308	Pa03g3308`Pa03g3308.1`	…nsed chromosome \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| nucleolus \| cytosol \| regulation of DNA-templated transcription \| negative regulation of cell population proliferation \| asymmetric cell division \| re… Show annotation evidence eggNOG Preferred name: LOC104600588 \| Seed ortholog: 337451.A0A443PYR3 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@1437183\|TMQ-50, Myb_DNA-binding@33090\|DqE-36, Myb_DNA-binding@3398\|NyQ-46, Myb_DNA-binding@35493\|JLv-42 GO GO:0000793 condensed chromosome; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0008356 asymmetric cell division; GO... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3315	Pa03g3315`Pa03g3315.1`	…87 \| GO:0045893 \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| zinc ion binding \| response to auxin \| response to salicylic acid \| cell wall modification \| positive regu… Show annotation evidence eggNOG Preferred name: DOF3.4 \| Seed ortholog: 337451.A0A443NFH8 \| COG: S \| eggNOG OG: zf-Dof@131567\|A-1*, zf-Dof@1437183\|LQ-13, zf-Dof@3193\|Bw-8, zf-Dof@33090\|d-5, zf-Dof@3398\|Eg-10 GO GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008270 zinc ion binding; GO:0009733 response to auxin; GO:0009751 response to salicylic acid; GO:0042545 cell wall modification; GO:0045787 positive regulation of cell cycle; GO...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3325	Pa03g3325`Pa03g3325.1`	… checkpoint \| homologous chromosome segregation \| positive regulation of transcription by transcription factor localization \| cellular hyperosmotic salinity response \| regulation of mitotic cell cycle spindle assembly checkpoint \| centriole assembly \| positive regulation of protein localization to n… Show annotation evidence eggNOG Preferred name: LOC104601948 \| Seed ortholog: 337451.A0A3S3MD21 \| COG: S \| eggNOG OG: WD40@131567\|PY-13, WD40@2759\|wr-17, WD40@3398\|Yri-35 GO GO:0000159 protein phosphatase type 2A complex; GO:0000329 fungal-type vacuole membrane; GO:0000705 achiasmate meiosis I; GO:0001100 negative regulation of exit from mitosis; GO:0002119 nematode larval development; GO:0003674 molecular_function; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005934 cellular bud tip; GO:0005935 cellular bud neck; GO:0009792 embryo development ending in... KEGG KO: K04354 \| Pathway: 03015 \| BRITE: 00001, 01009, 03019, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3346	Pa03g3346`Pa03g3346.1`	Pa03g3346 \| Pa03g3346.1 \| PAZX \| 337451.A0A443NFM8 \| Serpin@131567\|PT-13 \| Serpin@3398\|CmB-27 \| S \| K13963 \| 04310 \| 04610 \| 05133 \| 00001 \| 01002 \| Serpin_9_388 \| GO:0001822 \| GO:0001869 \| GO:0002034 \| GO:0004869 \| GO:0005515 \| GO:0005576 \| GO:0005737 \| GO... Show annotation evidence eggNOG Preferred name: PAZX \| Seed ortholog: 337451.A0A443NFM8 \| COG: S \| eggNOG OG: Serpin@131567\|PT-13, Serpin@3398\|CmB-27 GO GO:0001822 kidney development; GO:0001869 negative regulation of complement activation, lectin pathway; GO:0002034 maintenance of blood vessel diameter homeostasis by renin-angiotensin; GO:0004869 cysteine-type endopeptidase inhibitor activity; GO:0005515 protein binding; GO:0005576 extracellular region; GO:0005737 cytoplasm; GO:0007614 short-term memory; GO:0008015 blood circulation; GO:0010447 response to acidic... KEGG KO: K13963 \| Pathway: 04310, 04610, 05133 \| BRITE: 00001, 01002	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3350	Pa03g3350`Pa03g3350.1`	…629 \| GO:0048449 \| GO:0090701 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytosol \| regulation of DNA-templated transcription \| negative regulation of gene expression \| floral organ formation \| specification of plant organ i… Show annotation evidence eggNOG Preferred name: LOC123119581 \| Seed ortholog: 337451.A0A3S3MPD3 \| COG: S \| eggNOG OG: Myb_DNA-binding@33090\|B-2!, Myb_DNA-binding@3398\|Ab-9, Myb_DNA-binding@35493\|X-6 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0010629 negative regulation of gene expression; GO:0048449 floral organ formation; GO:0090701 specification of plant organ identity	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3374	Pa03g3374`Pa03g3374.1`	…\| glycolytic process through glucose-6-phosphate \| RNA polymerase II-specific DNA-binding transcription factor binding \| extracellular exosome \| cellular response to magnesium ion \| cellular response to cAMP \| cellular response to estrogen stimulus \| cellular response to xenobiotic stimulus \| cellul… Show annotation evidence eggNOG Preferred name: LOC123171571 \| Seed ortholog: 337451.A0A443NFJ9 \| COG: COG0158 \| eggNOG OG: FBPase@131567\|A-1, FBPase_C@131567\|A-1 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0005975 carbohydrate metabolic process; GO:0005983 starch catabolic process; GO:0005985 sucrose metabolic process; GO:0005986 sucrose biosynthetic process; GO... KEGG EC: ec:3.1.3.11 \| KO: K03841 \| Pathway: 00010, 00030, 00051, 00710, 01100, 01110, 01200 \| Module: M00003, M00165, M00344 \| BRITE: 00001, 01000, 04147	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3376	Pa03g3376`Pa03g3376.1`	…92 \| GO:1990110 \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| flower development \| regulation of floral meristem growth \| lateral root formation \| maintenance of shoot … Show annotation evidence eggNOG Preferred name: AIL6 \| Seed ortholog: 337451.A0A3S3Q2B2 \| COG: S \| eggNOG OG: AP2@131567\|Eo-12, AP2@3193\|Apr-24, AP2@33090\|Xs-18, AP2@3398\|BfV-26, AP2@58023\|BJE-25 GO GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009908 flower development; GO:0010080 regulation of floral meristem growth; GO:0010311 lateral root formation; GO:0010492 maintenance of shoot apical meristem identity; GO... KEGG KO: K09285 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa03g3385	Pa03g3385`Pa03g3385.1`	…is-regulatory region binding \| DNA-binding transcription activator activity \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| regulation of DNA-templated transcription \| regulation of cell size \| response to nematode \| regulation of defense response \| protein homo… Show annotation evidence eggNOG Preferred name: PCF2 \| Seed ortholog: 337451.A0A3S3MCM6 \| COG: S \| eggNOG OG: CCT@131567\|A-1, CCT@2759\|I-4, CCT@35493\|CW-9, GATA@131567\|A-1, GATA@2759\|x-6, GATA@35493\|Df-11, TCP@131221\|AC-7, TCP@131567\|A-1, TCP@2759\|G-3, TCP@3193\|Fh-13, tify@131567\|A-1, tify@35493\|AV-9 GO GO:0000976 transcription cis-regulatory region binding; GO:0001216 DNA-binding transcription activator activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0008361 regulation of cell size; GO:0009624 response to nematode; GO:0031347 regulation of defense response; GO:0042803... KEGG KO: K09184, K11648, K11770, K14972, K18658, K21630 \| Pathway: 03082, 03250 \| BRITE: 00001, 01009, 03000, 03019, 03021, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace

Functional Annotation Search

2,385 genes for “transcription factor”

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