Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

33,382
Hass annotations
3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

Matches

2,418 genes for “transcription factor”

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GO enrichmentExport FASTA
SelectGeneMatched annotationEvidenceActions
PaHa04g13010PaHa04g13010.1

…317 | GO:0048653 | GO:0080060 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | pollen development | response to jasmonic acid | regulation of embryonic development | seed morphogenesis | anther development | integument development

Show annotation evidence
eggNOG
Preferred name: LOC103714608 | Seed ortholog: 337451.A0A3S4PHW8 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|AFw-18, NAM@3398|CyA-28, NAM@35493|AE-6
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009555 pollen development; GO:0009753 response to jasmonic acid; GO:0045995 regulation of embryonic development; GO:0048317 seed morphogenesis; GO:0048653 anther development; GO:0080060 integument development
eggNOGGO
eggNOG-inferred
PaHa04g13190PaHa04g13190.1

…eus | positive regulation of transcription by RNA polymerase II | cognition | DNA-binding transcription factor binding

Show annotation evidence
eggNOG
Preferred name: BnaA09g11250D | Seed ortholog: 337451.A0A443PIV7 | COG: S | eggNOG OG: Methyltransf_16@131567|DZ-12, Methyltransf_16@2759|Ga-14
GO
GO:0001939 female pronucleus; GO:0001940 male pronucleus; GO:0003674 molecular_function; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0008150 biological_process; GO:0031072 heat shock protein binding; GO:0032991 protein-containing complex; GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity; GO:0035642 histone...
KEGG
EC: ec:2.7.1.59 | KO: K23151 | Pathway: 00520, 01100, 01250 | BRITE: 00001, 03110
eggNOGGOKEGG
eggNOG-inferred
PaHa04g13440PaHa04g13440.1

…rase III type 3 promoter sequence-specific DNA binding | molecular_function | DNA-binding transcription factor activity | protein binding | cellular_component | nucleus | nucleoplasm | nucleolus | cytoplasm | cytosol | plasma membrane | transcription by RNA polymerase II | biological_process | negat…

Show annotation evidence
eggNOG
Preferred name: LOC103702189 | Seed ortholog: 337451.A0A3S3PHF0 | COG: S | eggNOG OG: Maf1@2759|A-1
GO
GO:0000994 RNA polymerase III core binding; GO:0001002 RNA polymerase III type 1 promoter sequence-specific DNA binding; GO:0001003 RNA polymerase III type 2 promoter sequence-specific DNA binding; GO:0001006 RNA polymerase III type 3 promoter sequence-specific DNA binding; GO:0003674 molecular_function; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005575 cellular_component...
KEGG
KO: K25817 | BRITE: 00001, 03021
eggNOGGOKEGG
eggNOG-inferred
PaHa04g14240PaHa04g14240.1

… transcription activator activity, RNA polymerase II-specific | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | spindle | regulation of DNA-templated transcription | negative regulation of cell population proliferation | phragmoplast | response to fungus | respo…

Show annotation evidence
eggNOG
Preferred name: MYB3R4 | Seed ortholog: 337451.A0A443NXB7 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AWj-28, Myb_DNA-binding@2759|AhA-29
GO
GO:0000976 transcription cis-regulatory region binding; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005819 spindle; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0009524...
KEGG
KO: K09420 | Pathway: 04151, 04218 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa04g14310PaHa04g14310.1

…GO:0043565 | GO:0045792 | GO:0045893 | GO:0048281 | GO:1901002 | GO:1902584 | DNA-binding transcription factor activity | nucleus | leaf morphogenesis | sequence-specific DNA binding | negative regulation of cell size | positive regulation of DNA-templated transcription | inflorescence morphogenesis…

Show annotation evidence
eggNOG
Preferred name: ANAC094 | Seed ortholog: 337451.A0A3S3NEE1 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|ob-16, NAM@3398|wm-17, NAM@35493|AE-6
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009965 leaf morphogenesis; GO:0043565 sequence-specific DNA binding; GO:0045792 negative regulation of cell size; GO:0045893 positive regulation of DNA-templated transcription; GO:0048281 inflorescence morphogenesis; GO:1901002 positive regulation of response to salt stress; GO:1902584 positive regulation of response to water deprivation
eggNOGGO
eggNOG-inferred
PaHa04g14620PaHa04g14620.1

…latory region binding | cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription | response to nitrate | nitrate assimilation | response to nitrate starvation | energy homeostasis

Show annotation evidence
eggNOG
Preferred name: NLP1 | Seed ortholog: 337451.A0A3S3NED0 | COG: S | eggNOG OG: PB1@131567|A-1*, PB1@1437183|AjO-26, PB1@2759|Al-8!, PB1@3193|sP-22, RWP-RK@131567|Fy-13, RWP-RK@33090|af-25
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010167 response to nitrate; GO:0042128 nitrate assimilation; GO:0090548 response to nitrate starvation; GO:0097009 energy homeostasis
KEGG
KO: K13422 | Pathway: 04016, 04075 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa04g15020PaHa04g15020.1

PaHa04g15020 | PaHa04g15020.1 | RRP44A | 337451.A0A443PIF9 | OB_Dis3@131567|C-2 | OB_Dis3@2759|Bo-9 | PIN_4@131567|CT-9 | RNB@131567|B-2 | RNB@2759|gW-22 | Rrp44_CSD1@131567|A-1* | Rrp44_CSD1@2759|e-6 | Rrp44_S1@131567|A-1* | Rrp44_S1@2759|C-2 | COG0557 |...

Show annotation evidence
eggNOG
Preferred name: RRP44A | Seed ortholog: 337451.A0A443PIF9 | COG: COG0557 | eggNOG OG: OB_Dis3@131567|C-2, OB_Dis3@2759|Bo-9, PIN_4@131567|CT-9, RNB@131567|B-2, RNB@2759|gW-22, Rrp44_CSD1@131567|A-1*, Rrp44_CSD1@2759|e-6, Rrp44_S1@131567|A-1*, Rrp44_S1@2759|C-2
GO
GO:0000049 tRNA binding; GO:0000175 3'-5'-RNA exonuclease activity; GO:0000278 mitotic cell cycle; GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; GO:0000465 exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000467 exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic...
KEGG
KO: K12585 | Pathway: 03018 | BRITE: 00001, 03019
eggNOGGOKEGG
eggNOG-inferred
PaHa04g15100PaHa04g15100.1

…001 | GO:1901371 | GO:1905615 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to water deprivation | response to salt stress | response to gibberellin | response to salicylic …

Show annotation evidence
eggNOG
Preferred name: SRM1 | Seed ortholog: 71139.A0A059BG48 | COG: S | eggNOG OG: Myb_DNA-binding@131567|uC-23, Myb_DNA-binding@33090|ItR-42, Myb_DNA-binding@58023|NbR-46
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009651 response to salt stress; GO:0009739 response to gibberellin; GO:0009751 response to salicylic acid; GO:0009787 regulation of abscisic acid-activated...
KEGG
KO: K22560, K23406, K24536 | Pathway: 03082 | BRITE: 00001, 03036, 04121
eggNOGGOKEGG
eggNOG-inferred
PaHa04g15130PaHa04g15130.1

…001 | GO:1901371 | GO:1905615 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to water deprivation | response to salt stress | response to gibberellin | response to salicylic …

Show annotation evidence
eggNOG
Preferred name: SRM1 | Seed ortholog: 3847.K7L9L3 | COG: S | eggNOG OG: Myb_DNA-binding@131567|uC-23, Myb_DNA-binding@2231393|ato-57, Myb_DNA-binding@33090|ItR-42, Myb_DNA-binding@58023|NbR-46
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009651 response to salt stress; GO:0009739 response to gibberellin; GO:0009751 response to salicylic acid; GO:0009787 regulation of abscisic acid-activated...
KEGG
KO: K22560, K23406, K24536 | Pathway: 03082 | BRITE: 00001, 03036, 04121
eggNOGGOKEGG
eggNOG-inferred
PaHa04g15380PaHa04g15380.1

…binding | cis-regulatory region sequence-specific DNA binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | regulation of DNA-templated transcription | circadian rhythm | response to heat | response to cold | response to blue light | auxin-activa…

Show annotation evidence
eggNOG
Preferred name: LOC108988117 | Seed ortholog: 337451.A0A443PID9 | COG: S | eggNOG OG: Myb_DNA-binding@131567|uI-23, Myb_DNA-binding@2759|yY-24, Myb_DNA-binding@58023|Lhv-44
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0009408 response to heat; GO:0009409 response to cold; GO...
KEGG
EC: ec:3.4.21.102 | KO: K03797, K11314, K12133, K12134, K15127 | Pathway: 04712 | BRITE: 00001, 01000, 01002, 03000, 03021, 03036
eggNOGGOKEGG
eggNOG-inferred
PaHa04g15500PaHa04g15500.1

…634 | GO:0090602 | GO:0090603 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | sieve element enucleation | sieve element differentiation

Show annotation evidence
eggNOG
Preferred name: LOC104606950 | Seed ortholog: 337451.A0A3S3NMB0 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@1437183|ECT-30, NAM@3193|pA-16, NAM@3398|Azx-22, NAM@35493|AE-6
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0090602 sieve element enucleation; GO:0090603 sieve element differentiation
eggNOGGO
eggNOG-inferred
PaHa04g15540PaHa04g15540.1

PaHa04g15540 | PaHa04g15540.1 | SDG40 | 337451.A0A443PIB9 | Rubis-subs-bind@131567|d-5 | SET@131567|BL-7 | SET@2759|AOr-18 | S | ec:2.1.1.127 | ec:2.1.1.259 | ec:2.1.1.364 | ec:2.1.1.85 | K00592 | K05302 | K07399 | K19199 | K27277 | K27349 | 00001 | 01000 |...

Show annotation evidence
eggNOG
Preferred name: SDG40 | Seed ortholog: 337451.A0A443PIB9 | COG: S | eggNOG OG: Rubis-subs-bind@131567|d-5, SET@131567|BL-7, SET@2759|AOr-18
GO
GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0005515 protein binding; GO:0006338 chromatin remodeling; GO:0008150 biological_process; GO:0009416 response to light stimulus; GO:0009507 chloroplast; GO:0009658 chloroplast organization; GO:0009735 response to cytokinin; GO:0010027 thylakoid membrane organization; GO:0016279 protein-lysine N-methyltransferase activity; GO:0018023 peptidyl-lysine...
KEGG
EC: ec:2.1.1.127, ec:2.1.1.259, ec:2.1.1.364, ec:2.1.1.85 | KO: K00592, K05302, K07399, K19199, K27277, K27349 | BRITE: 00001, 01000, 03009, 03036, 04812
eggNOGGOKEGG
eggNOG-inferred
PaHa04g15550PaHa04g15550.1

…638 | GO:0045893 | GO:1900056 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | signal transduction | circadian rhythm | chloroplast organization | negative regulation of flower development | regulation of chlorophyll …

Show annotation evidence
eggNOG
Preferred name: MYBR14 | Seed ortholog: 337451.A0A443PIC1 | COG: S | eggNOG OG: Myb_DNA-binding@131567|dl-20, Myb_DNA-binding@1437183|CtC-35, Myb_DNA-binding@2759|pK-22, Myb_DNA-binding@3193|BFB-31, Myb_DNA-binding@33090|Adt-29, Myb_DNA-binding@58023|CQy-34
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0007165 signal transduction; GO:0007623 circadian rhythm; GO:0009658 chloroplast organization; GO:0009910 negative regulation of flower development; GO:0010380 regulation of chlorophyll biosynthetic process; GO:0010638 positive...
eggNOGGO
eggNOG-inferred
PaHa04g15580PaHa04g15580.1

…638 | GO:0045893 | GO:1900056 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | signal transduction | circadian rhythm | chloroplast organization | negative regulation of flower development | regulation of chlorophyll …

Show annotation evidence
eggNOG
Preferred name: MYBR14 | Seed ortholog: 337451.A0A443PIC1 | COG: S | eggNOG OG: Myb_DNA-binding@131567|dl-20, Myb_DNA-binding@1437183|CtC-35, Myb_DNA-binding@2759|pK-22, Myb_DNA-binding@3193|BFB-31, Myb_DNA-binding@33090|Adt-29, Myb_DNA-binding@58023|CQy-34
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0007165 signal transduction; GO:0007623 circadian rhythm; GO:0009658 chloroplast organization; GO:0009910 negative regulation of flower development; GO:0010380 regulation of chlorophyll biosynthetic process; GO:0010638 positive...
eggNOGGO
eggNOG-inferred
PaHa04g15640PaHa04g15640.1

…565 | GO:0045893 | GO:0048364 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | asymmetric cell division | sequence-specific DNA binding | positive regulation of DNA-templated transcript…

Show annotation evidence
eggNOG
Preferred name: LOC104606980 | Seed ortholog: 337451.A0A3S3PH57 | COG: S | eggNOG OG: zf-C2H2@131567|qO-18, zf-C2H2@2759|AFG-19, zf-C2H2@3193|IJs-30, zf-C2H2@58023|JjW-31
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008356 asymmetric cell division; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0048364 root development
KEGG
KO: K25870 | Pathway: 04391, 05168 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa04g15910PaHa04g15910.1

…ng chaperone binding | misfolded protein binding | RNA polymerase II-specific DNA-binding transcription factor binding | secretory vesicle | protein sequestering activity | ATP-dependent protein folding chaperone

Show annotation evidence
eggNOG
Preferred name: LOC116193380 | Seed ortholog: 1590841.A0A2R6QL34 | COG: COG0443 | eggNOG OG: HSP70@131567|MV-14, HSP70@35493|Nbu-48, HSP70@58023|PJo-50
GO
GO:0000304 response to singlet oxygen; GO:0005509 calcium ion binding; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005788 endoplasmic reticulum lumen; GO:0006457 protein folding; GO:0009408 response to heat; GO:0009507 chloroplast; GO:0009860 pollen tube growth; GO:0015450 protein-transporting ATPase activity; GO:0016592 mediator complex; GO:0016887 ATP hydrolysis activity; GO:0019899 enzyme binding;...
KEGG
EC: ec:3.6.4.10 | KO: K09490 | Pathway: 03060, 04141 | BRITE: 00001, 01000, 03110, 04131, 04147
eggNOGGOKEGG
eggNOG-inferred
PaHa04g15990PaHa04g15990.1

…733 | GO:0009908 | GO:0010154 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to auxin | flower development | fruit development

Show annotation evidence
eggNOG
Preferred name: ARF12 | Seed ortholog: 337451.A0A443PI93 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|xW-20, AUX_IAA@3398|Aet-24, Auxin_resp@131221|y-7, Auxin_resp@131567|A-1*, Auxin_resp@2759|O-4, Auxin_resp@3193|Aa-8, Auxin_resp@3398|Ch-11, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AqU-23, B3@33090|Id-12, B3@3398|BOY-25
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009733 response to auxin; GO:0009908 flower development; GO:0010154 fruit development
KEGG
KO: K14486 | Pathway: 04075 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa04g16170PaHa04g16170.1

PaHa04g16170 | PaHa04g16170.1 | ELF1 | 337451.A0A443PI70 | Elf1@131567|A-1 | COG4888 | K25829 | 00001 | 03400 | Elf1_2_78 | GO:0000993 | GO:0003674 | GO:0003677 | GO:0003711 | GO:0005515 | GO:0005575 | GO:0005634 | GO:0005694 | GO:0005730 | GO:0006283 | GO...

Show annotation evidence
eggNOG
Preferred name: ELF1 | Seed ortholog: 337451.A0A443PI70 | COG: COG4888 | eggNOG OG: Elf1@131567|A-1
GO
GO:0000993 RNA polymerase II complex binding; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003711 transcription elongation factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005694 chromosome; GO:0005730 nucleolus; GO:0006283 transcription-coupled nucleotide-excision repair; GO:0006325 chromatin organization; GO:0006355 regulation of DNA-templated...
KEGG
KO: K25829 | BRITE: 00001, 03400
eggNOGGOKEGG
eggNOG-inferred
PaHa04g16290PaHa04g16290.1

…355 | GO:0009637 | GO:0009911 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to blue light | positive regulation of flower development

Show annotation evidence
eggNOG
Preferred name: BHLH49 | Seed ortholog: 337451.A0A443PW54 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@1437183|ODO-37, HLH@3193|Hds-32, HLH@33090|AbH-19, HLH@3398|Jxn-34
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009637 response to blue light; GO:0009911 positive regulation of flower development
eggNOGGO
eggNOG-inferred
PaHa04g16350PaHa04g16350.1

…ing | RNA polymerase II cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity, RNA polymerase II-specific | DNA-binding transcription repressor activity, RNA polymerase II-specific | DNA binding | chromatin binding | DNA-binding transcription factor activity…

Show annotation evidence
eggNOG
Preferred name: ILR3 | Seed ortholog: 337451.A0A443PI60 | COG: S | eggNOG OG: HLH@131567|BWE-22, HLH@3398|Izc-33
GO
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding...
KEGG
KO: K09114, K09115 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa04g17100PaHa04g17100.1

…65 | GO:0048578 | GO:0140537 | DNA-binding transcription activator activity | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | regulation of circadian rhythm | positive regulation of circadian rhythm | sequence-specific DNA binding |…

Show annotation evidence
eggNOG
Preferred name: TCP7 | Seed ortholog: 337451.A0A443PHZ8 | COG: S | eggNOG OG: TCP@131221|AC-7, TCP@131567|A-1*, TCP@2759|G-3, TCP@3193|DK-11, TCP@3398|EV-12
GO
GO:0001216 DNA-binding transcription activator activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0042752 regulation of circadian rhythm; GO:0042753 positive regulation of circadian rhythm; GO:0043565 sequence-specific DNA binding; GO:0048578 positive regulation of long-day photoperiodism,...
KEGG
KO: K16221 | Pathway: 04712 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa04g17330PaHa04g17330.1

…001 | GO:1901371 | GO:1905615 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to water deprivation | response to salt stress | response to gibberellin | response to salicylic …

Show annotation evidence
eggNOG
Preferred name: DIVARICATA | Seed ortholog: 337451.A0A3S3NE26 | COG: S | eggNOG OG: Myb_DNA-binding@131567|uC-23, Myb_DNA-binding@33090|ItR-42, Myb_DNA-binding@58023|NbR-46
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009651 response to salt stress; GO:0009739 response to gibberellin; GO:0009751 response to salicylic acid; GO:0009787 regulation of abscisic acid-activated...
KEGG
KO: K22560, K23406, K24536 | Pathway: 03082 | BRITE: 00001, 03036, 04121
eggNOGGOKEGG
eggNOG-inferred
PaHa04g17370PaHa04g17370.1

…001 | GO:1901371 | GO:1905615 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to water deprivation | response to salt stress | response to gibberellin | response to salicylic …

Show annotation evidence
eggNOG
Preferred name: DIVARICATA | Seed ortholog: 337451.A0A443PHY0 | COG: S | eggNOG OG: Myb_DNA-binding@131567|uC-23, Myb_DNA-binding@33090|ItR-42, Myb_DNA-binding@58023|NbR-46
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009651 response to salt stress; GO:0009739 response to gibberellin; GO:0009751 response to salicylic acid; GO:0009787 regulation of abscisic acid-activated...
KEGG
KO: K22560, K23406, K24536 | Pathway: 03082 | BRITE: 00001, 03036, 04121
eggNOGGOKEGG
eggNOG-inferred
PaHa04g17380PaHa04g17380.1

…001 | GO:1901371 | GO:1905615 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to water deprivation | response to salt stress | response to gibberellin | response to salicylic …

Show annotation evidence
eggNOG
Preferred name: DIVARICATA | Seed ortholog: 337451.A0A443PHY0 | COG: S | eggNOG OG: Myb_DNA-binding@131567|uC-23, Myb_DNA-binding@33090|ItR-42, Myb_DNA-binding@58023|NbR-46
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009651 response to salt stress; GO:0009739 response to gibberellin; GO:0009751 response to salicylic acid; GO:0009787 regulation of abscisic acid-activated...
KEGG
KO: K22560, K23406, K24536 | Pathway: 03082 | BRITE: 00001, 03036, 04121
eggNOGGOKEGG
eggNOG-inferred
PaHa04g17780PaHa04g17780.1

… DNA binding | ATPase activator activity | molecular_function | DNA binding | DNA-binding transcription factor activity | RNA binding | protein tyrosine kinase activity | protein binding | cellular_component | nucleus | nucleoplasm | chromatin silencing complex | chromosome | polytene chromosome | p…

Show annotation evidence
eggNOG
Preferred name: MAH20.19 | Seed ortholog: 337451.A0A3S3PGY1 | COG: S | eggNOG OG: DDT@131567|U-5, WAC_Acf1_DNA_bd@2759|A-1, WHIM1@131567|C-2, WHIM1@2759|BK-8, WSD@131567|A-1*, WSD@2759|BF-8!
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000183 rDNA heterochromatin formation; GO:0000228 nuclear chromosome; GO:0000785 chromatin; GO:0000793 condensed chromosome; GO:0000976 transcription cis-regulatory region binding; GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding; GO:0001671 ATPase activator activity; GO:0003674 molecular_function; GO:0003677 DNA...
KEGG
EC: ec:2.3.1.48 | KO: K11655, K11658, K15224, K22768, K26167 | Pathway: 03082 | BRITE: 00001, 01000, 03021, 03036
eggNOGGOKEGG
eggNOG-inferred
PaHa04g18070PaHa04g18070.1

…0090397 | cis-regulatory region sequence-specific DNA binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | seed coat development | protein dimerization activity | seed development | carpel development | plant ovul…

Show annotation evidence
eggNOG
Preferred name: AG2 | Seed ortholog: 337451.A0A3S3QTR5 | COG: S | eggNOG OG: K-box@131221|b-5, K-box@131567|A-1*, K-box@2759|O-4, K-box@3398|Mi-13, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|BXL-27, SRF-TF@35493|jY-20
GO
GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010214 seed coat development; GO:0046983 protein dimerization activity; GO:0048316 seed development; GO:0048440 carpel development; GO:0048481 plant ovule development;...
KEGG
KO: K09264 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa04g18080PaHa04g18080.1

…0008150 | condensed chromosome | condensed nuclear chromosome | DNA binding | DNA-binding transcription factor activity | nucleus | biological_process

Show annotation evidence
eggNOG
Preferred name: HMGB13 | Seed ortholog: 337451.A0A3S3N1A8 | COG: S | eggNOG OG: HMG_box@131567|Aj-7, HMG_box@2759|Of-14
GO
GO:0000793 condensed chromosome; GO:0000794 condensed nuclear chromosome; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0008150 biological_process
KEGG
EC: ec:2.1.1.354 | KO: K09273 | Pathway: 00310, 01100 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
PaHa04g18090PaHa04g18090.1

…0008150 | condensed chromosome | condensed nuclear chromosome | DNA binding | DNA-binding transcription factor activity | nucleus | biological_process

Show annotation evidence
eggNOG
Preferred name: HMGB13 | Seed ortholog: 337451.A0A3S3N1A8 | COG: S | eggNOG OG: HMG_box@131567|Aj-7, HMG_box@2759|Of-14
GO
GO:0000793 condensed chromosome; GO:0000794 condensed nuclear chromosome; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0008150 biological_process
KEGG
EC: ec:2.1.1.354 | KO: K09273 | Pathway: 00310, 01100 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
PaHa04g18130PaHa04g18130.1

…F-TF_10_56 | GO:0003700 | GO:0005515 | GO:0005634 | GO:0010228 | GO:0048364 | DNA-binding transcription factor activity | protein binding | nucleus | vegetative to reproductive phase transition of meristem | root development

Show annotation evidence
eggNOG
Preferred name: AGL12 | Seed ortholog: 337451.A0A3S3MY59 | COG: S | eggNOG OG: K-box@131567|A-1*, K-box@1437183|Bb-8, K-box@2759|v-6, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3193|so-21, SRF-TF@3398|APQ-23, SRF-TF@35493|bP-19
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0010228 vegetative to reproductive phase transition of meristem; GO:0048364 root development
KEGG
KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021, 04131
eggNOGGOKEGG
eggNOG-inferred
PaHa04g18350PaHa04g18350.1

…620 | GO:0042631 | GO:0070482 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | cytoplasm | response to fungus | cellular response to water deprivation | response to oxygen levels

Show annotation evidence
eggNOG
Preferred name: LOC104586477 | Seed ortholog: 337451.A0A3S3P0B9 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@1437183|XO-18, AP2@3193|Nu-16, AP2@33090|Hw-14
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009620 response to fungus; GO:0042631 cellular response to water deprivation; GO:0070482 response to oxygen levels
KEGG
KO: K09286 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred

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