Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046
West Indian T2T annotations
3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

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2,385 genes for “transcription factor”

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Pa11g0327Pa11g0327.1

Pa11g0327 | Pa11g0327.1 | BnaCnng28020D | 56857.A0A200QUE0 | C2@131567|F-3 | C2@1437183|Cxl-21 | C2@2759|w-6 | C2@35493|ABN-15 | PRT_C@1437183|MT-18 | PRT_C@2759|A-1 | PRT_C@3398|Dp-13 | PRT_C@35493|BY-10 | S | ec:3.1.3.64 | ec:3.1.3.95 | K17631 | K17633 |...

Show annotation evidence
eggNOG
Preferred name: BnaCnng28020D | Seed ortholog: 56857.A0A200QUE0 | COG: S | eggNOG OG: C2@131567|F-3, C2@1437183|Cxl-21, C2@2759|w-6, C2@35493|ABN-15, PRT_C@1437183|MT-18, PRT_C@2759|A-1, PRT_C@3398|Dp-13, PRT_C@35493|BY-10
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0002021 response to dietary excess; GO:0003674 molecular_function; GO:0005739 mitochondrion; GO:0007165 signal transduction; GO:0007265 Ras protein signal transduction; GO:0007389 pattern specification process; GO:0008150 biological_process; GO:0008285 negative regulation of cell population proliferation; GO:0008542 visual learning; GO...
KEGG
EC: ec:3.1.3.64, ec:3.1.3.95 | KO: K17631, K17633, K17634, K18081, K19901 | Pathway: 00562, 01100, 04014, 04070, 04210, 04668 | BRITE: 00001, 01000, 01009
eggNOGGOKEGG
eggNOG-inferred
Pa11g0328Pa11g0328.1

Pa11g0328 | Pa11g0328.1 | BnaCnng28020D | 4432.A0A1U7ZMS7 | C2@131567|F-3 | C2@1437183|Cxl-21 | C2@2759|w-6 | C2@35493|ABN-15 | PRT_C@1437183|MT-18 | PRT_C@2759|A-1 | PRT_C@3398|Dp-13 | PRT_C@35493|BY-10 | S | ec:3.1.3.64 | ec:3.1.3.95 | K17631 | K17633 |...

Show annotation evidence
eggNOG
Preferred name: BnaCnng28020D | Seed ortholog: 4432.A0A1U7ZMS7 | COG: S | eggNOG OG: C2@131567|F-3, C2@1437183|Cxl-21, C2@2759|w-6, C2@35493|ABN-15, PRT_C@1437183|MT-18, PRT_C@2759|A-1, PRT_C@3398|Dp-13, PRT_C@35493|BY-10
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0002021 response to dietary excess; GO:0003674 molecular_function; GO:0005739 mitochondrion; GO:0007165 signal transduction; GO:0007265 Ras protein signal transduction; GO:0007389 pattern specification process; GO:0008150 biological_process; GO:0008285 negative regulation of cell population proliferation; GO:0008542 visual learning; GO...
KEGG
EC: ec:3.1.3.64, ec:3.1.3.95 | KO: K17631, K17633, K17634, K18081, K19901 | Pathway: 00562, 01100, 04014, 04070, 04210, 04668 | BRITE: 00001, 01000, 01009
eggNOGGOKEGG
eggNOG-inferred
Pa11g0342Pa11g0342.1

…GO:0005515 | GO:0005634 | GO:0009639 | GO:0010018 | GO:0016607 | GO:0045893 | DNA-binding transcription factor activity | protein binding | nucleus | response to red or far red light | far-red light signaling pathway | nuclear speck | positive regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: LAF1 | Seed ortholog: 337451.A0A3S3QYY0 | COG: S | eggNOG OG: Myb_DNA-binding@131221|JKd-42, Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@35493|IIv-41
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009639 response to red or far red light; GO:0010018 far-red light signaling pathway; GO:0016607 nuclear speck; GO:0045893 positive regulation of DNA-templated transcription
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa11g0347Pa11g0347.1

… Myb_DNA-binding_67_112 | GO:0003700 | GO:0005515 | GO:0005634 | GO:0009909 | DNA-binding transcription factor activity | protein binding | nucleus | regulation of flower development

Show annotation evidence
eggNOG
Preferred name: MYB4 | Seed ortholog: 337451.A0A3S4PL63 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3193|IJR-41, Myb_DNA-binding@33090|Eca-37
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009909 regulation of flower development
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa11g0377Pa11g0377.1

…95 | GO:0010097 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | specification of floral organ identity | specification of petal identity | specification of stamen identity

Show annotation evidence
eggNOG
Preferred name: PI | Seed ortholog: 337451.A0A3S3PJG8 | COG: S | eggNOG OG: K-box@131567|A-1*, K-box@2759|B-2, K-box@3398|U-5, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3193|so-21, SRF-TF@3398|AqI-25, SRF-TF@35493|bP-19
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0010093 specification of floral organ identity; GO:0010095 specification of petal identity; GO:0010097 specification of stamen identity
KEGG
KO: K09264 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa11g0449Pa11g0449.1

…-9 | SBP@33090|m-6 | S | SBP_135_208 | GO:0003700 | GO:0005634 | GO:0006355 | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: SPL1 | Seed ortholog: 337451.A0A443PE63 | COG: S | eggNOG OG: SBP@131567|A-1*, SBP@3193|DH-9, SBP@33090|m-6
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
Pa11g0484Pa11g0484.1

…150 | GO:0045893 | GO:2000377 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | response to high light intensity | drought recovery | regulation of flavonoid biosynthetic process | leaf senescence | positive regulation of DNA-templated transcriptio…

Show annotation evidence
eggNOG
Preferred name: NAC078 | Seed ortholog: 337451.A0A3S3N460 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|oz-16, NAM@35493|AE-6, NAM@58023|Abm-20
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009644 response to high light intensity; GO:0009819 drought recovery; GO:0009962 regulation of flavonoid biosynthetic process; GO:0010150 leaf senescence; GO:0045893 positive regulation of DNA-templated transcription; GO:2000377 regulation of reactive oxygen species metabolic process
eggNOGGO
eggNOG-inferred
Pa11g0495Pa11g0495.1

…O:0048577 | GO:0060862 | GO:0060867 | GO:0071365 | GO:2000692 | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | embryo development ending in seed dormancy | negative regulation of flower development | fruit dehiscence | floral organ abscission | soma…

Show annotation evidence
eggNOG
Preferred name: AGL15 | Seed ortholog: 4432.A0A1U8B1F1 | COG: S | eggNOG OG: K-box@131567|A-1*, K-box@2759|F-3, K-box@3398|DZ-10, K-box@35493|V-5, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|APG-23
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009793 embryo development ending in seed dormancy; GO:0009910 negative regulation of flower development; GO:0010047 fruit dehiscence; GO:0010227 floral organ abscission; GO:0010262 somatic embryogenesis; GO:0010629 negative regulation of gene expression; GO:0042803...
KEGG
KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021, 04131
eggNOGGOKEGG
eggNOG-inferred
Pa11g0499Pa11g0499.1

…ay | regulation of miRNA-mediated gene silencing | RNA polymerase II-specific DNA-binding transcription factor binding | ubiquitin protein ligase activity | NEDD8 ligase activity | cellular response to chemical stress | protein K63-linked ubiquitination | protein K48-linked ubiquitination | protein …

Show annotation evidence
eggNOG
Preferred name: RBX1 | Seed ortholog: 337451.A0A443PMJ8 | COG: S | eggNOG OG: zf-rbx1@131567|Gg-12, zf-rbx1@2759|IE-13!
GO
GO:0000045 autophagosome assembly; GO:0000082 G1/S transition of mitotic cell cycle; GO:0000086 G2/M transition of mitotic cell cycle; GO:0000109 nucleotide-excision repair complex; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000151 ubiquitin ligase complex; GO:0000165 MAPK cascade; GO:0000209 protein polyubiquitination; GO:0000409 regulation of transcription by galactose; GO:0000423...
KEGG
EC: ec:2.3.2.32 | KO: K03358, K03868, K10611 | Pathway: 03420, 04066, 04110, 04111, 04114, 04120, 04141, 04310, 04341, 04350, 04710, 05131, 05170, 05200, 05211 | BRITE: 00001, 01000, 03036, 03400, 04121
eggNOGGOKEGG
eggNOG-inferred
Pa11g0503Pa11g0503.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: LOC104599110 | Seed ortholog: 337451.A0A443N3B1 | COG: COG4886 | eggNOG OG: LRR_8@131567|C-2!, LRR_8@3398|jP-24, NB-ARC@131567|AC-6, NB-ARC@1437183|ERq-33, NB-ARC@3398|CSM-29, NB-ARC@35493|AQS-21
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K13459 | Pathway: 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa11g0515Pa11g0515.1

…01 | 03000 | AP2_86_141 | GO:0003700 | GO:0005515 | GO:0005634 | GO:0005737 | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm

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eggNOG
Preferred name: LOC103721225 | Seed ortholog: 337451.A0A443PMI2 | COG: S | eggNOG OG: AP2@131567|Eo-12, AP2@3193|Bfi-26, AP2@33090|Xs-18
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm
KEGG
KO: K09285 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa11g0517Pa11g0517.1

…_6@3398|BAm-25 | S | zf-C2H2_6_55_79 | GO:0003700 | GO:0005634 | GO:0006355 | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription

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eggNOG
Preferred name: LOC109010029 | Seed ortholog: 29760.F6HL78 | COG: S | eggNOG OG: zf-C2H2_6@131567|B-2, zf-C2H2_6@1437183|DNj-30, zf-C2H2_6@3193|vX-21, zf-C2H2_6@3398|BAm-25
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
Pa11g0518Pa11g0518.1

Pa11g0518 | Pa11g0518.1 | INPP5J | 43335.A0A4V6AAV5 | Exo_endo_phos@131567|Jb-15 | ec:3.1.11.2 | ec:3.1.13.4 | ec:3.1.3.36 | ec:3.1.3.56 | ec:3.1.3.86 | ec:3.1.4.12 | ec:5.6.2.3 | K01099 | K01106 | K03084 | K03283 | K10772 | K12351 | K15255 | K15909 |...

Show annotation evidence
eggNOG
Preferred name: INPP5J | Seed ortholog: 43335.A0A4V6AAV5 | eggNOG OG: Exo_endo_phos@131567|Jb-15
GO
GO:0000132 establishment of mitotic spindle orientation; GO:0000139 Golgi membrane; GO:0000329 fungal-type vacuole membrane; GO:0000922 spindle pole; GO:0001701 in utero embryonic development; GO:0001726 ruffle; GO:0001750 photoreceptor outer segment; GO:0001755 neural crest cell migration; GO:0001919 regulation of receptor recycling; GO:0001956 positive regulation of neurotransmitter secretion; GO:0001958...
KEGG
EC: ec:3.1.11.2, ec:3.1.13.4, ec:3.1.3.36, ec:3.1.3.56, ec:3.1.3.86, ec:3.1.4.12, ec:5.6.2.3 | KO: K01099, K01106, K03084, K03283, K10772, K12351, K15255, K15909, K18729, K19612, K19619, K20278, K20279, K24221, K24222 | Pathway: 00562, 00600, 01100, 03040, 04070, 04141, 04144, 04662, 04664, 04666, 04910 | Module: M00131 | BRITE: 00001, 01000, 01009, 03009, 03019, 03029, 03032, 03036, 03041, 03051, 03110, 03400,...
eggNOGGOKEGG
eggNOG-inferred
Pa11g0556Pa11g0556.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3QYL4 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa11g0562Pa11g0562.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A3S3QYL4 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa11g0596Pa11g0596.1

Pa11g0596 | Pa11g0596.1 | LOC104597068 | 337451.A0A3S3N4B1 | Skp1_POZ@131567|B-2 | S | K03872 | 04120 | 00001 | 03400 | 04121 | Skp1_POZ_6_66 | GO:0000113 | GO:0000122 | GO:0001222 | GO:0003674 | GO:0003682 | GO:0003711 | GO:0004842 | GO:0005515 | GO...

Show annotation evidence
eggNOG
Preferred name: LOC104597068 | Seed ortholog: 337451.A0A3S3N4B1 | COG: S | eggNOG OG: Skp1_POZ@131567|B-2
GO
GO:0000113 nucleotide-excision repair factor 4 complex; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001222 transcription corepressor binding; GO:0003674 molecular_function; GO:0003682 chromatin binding; GO:0003711 transcription elongation factor activity; GO:0004842 ubiquitin-protein transferase activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus;...
KEGG
KO: K03872 | Pathway: 04120 | BRITE: 00001, 03400, 04121
eggNOGGOKEGG
eggNOG-inferred
Pa11g0763Pa11g0763.1

Pa11g0763 | Pa11g0763.1 | LOC110796424 | 218851.A0A2G5E0X1 | CH@131567|A-1* | CH@1437183|AjM-22 | CH@2759|HS-11 | CH@33090|ACH-19 | Kinesin@131567|A-1* | Kinesin@2759|Bid-19 | Kinesin@3193|Jja-32 | Kinesin@3398|MEU-35 | S | K10406 | 04814 | 00001 | 04812 |...

Show annotation evidence
eggNOG
Preferred name: LOC110796424 | Seed ortholog: 218851.A0A2G5E0X1 | COG: S | eggNOG OG: CH@131567|A-1*, CH@1437183|AjM-22, CH@2759|HS-11, CH@33090|ACH-19, Kinesin@131567|A-1*, Kinesin@2759|Bid-19, Kinesin@3193|Jja-32, Kinesin@3398|MEU-35
GO
GO:0001525 angiogenesis; GO:0001568 blood vessel development; GO:0001935 endothelial cell proliferation; GO:0002244 hematopoietic progenitor cell differentiation; GO:0003774 cytoskeletal motor activity; GO:0003777 microtubule motor activity; GO:0005085 guanyl-nucleotide exchange factor activity; GO:0005096 GTPase activator activity; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005547...
KEGG
KO: K10406 | Pathway: 04814 | BRITE: 00001, 04812
eggNOGGOKEGG
eggNOG-inferred
Pa11g0765Pa11g0765.1

…GO:0003723 | GO:0005634 | GO:0005730 | GO:0005829 | GO:0008097 | GO:0080084 | DNA-binding transcription factor activity | RNA binding | nucleus | nucleolus | cytosol | 5S rRNA binding | 5S rDNA binding

Show annotation evidence
eggNOG
Preferred name: LOC107943963, LOC109013146 | Seed ortholog: 2094558.A0A314Y4G4, 3641.A0A061FJM2 | COG: S | eggNOG OG: zf-C2H2@131567|Asb-21, zf-C2H2@171637|wCX-46, zf-C2H2@2759|DEq-25
GO
GO:0003700 DNA-binding transcription factor activity; GO:0003723 RNA binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005829 cytosol; GO:0008097 5S rRNA binding; GO:0080084 5S rDNA binding
KEGG
KO: K09191 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
Pa11g0835Pa11g0835.1

…11 | regulation of alternative mRNA splicing, via spliceosome | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | nucleolus | nuclear cap binding complex | regulation of DNA-templated transcription | RNA splicing | ta-siRNA processing | nuclear dicing body | nucle…

Show annotation evidence
eggNOG
Preferred name: SE | Seed ortholog: 337451.A0A3S3QXF2 | COG: S | eggNOG OG: ARS2@2759|A-1, ARS2@3398|BB-10, SERRATE_Ars2_N@2759|A-1, SERRATE_Ars2_N@3398|Af-8
GO
GO:0000381 regulation of alternative mRNA splicing, via spliceosome; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005846 nuclear cap binding complex; GO:0006355 regulation of DNA-templated transcription; GO:0008380 RNA splicing; GO:0010267 ta-siRNA processing; GO:0010445 nuclear dicing body; GO:0016607...
KEGG
KO: K27103 | BRITE: 00001, 03019
eggNOGGOKEGG
eggNOG-inferred
Pa11g0892Pa11g0892.1

…vity | minor groove of adenine-thymine-rich DNA binding | chromatin binding | DNA-binding transcription factor activity | transcription elongation factor activity | transcription coactivator activity | transcription corepressor activity | RNA binding | helicase activity | histone acetyltransferase a…

Show annotation evidence
eggNOG
Preferred name: IDM1, LOC123092455 | Seed ortholog: 337451.A0A3S3NC16, 42345.A0A2H3ZRR7 | COG: S | eggNOG OG: Agenet@131567|V-5, Agenet@3398|BO-8, PHD@131567|A-1*, PHD@2759|B-2!, TDBD@131567|A-1*, TDBD@2759|Ai-9, TDBD@2759|BJ-10, TDBD@3193|ER-13, TDBD@33090|BM-10
GO
GO:0000082 G1/S transition of mitotic cell cycle; GO:0000118 histone deacetylase complex; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000123 histone acetyltransferase complex; GO:0000183 rDNA heterochromatin formation; GO:0000212 meiotic spindle organization; GO:0000228 nuclear chromosome; GO:0000278 mitotic cell cycle; GO:0000381 regulation of alternative mRNA splicing, via...
KEGG
EC: ec:1.14.11.27, ec:1.14.11.65, ec:1.14.11.67, ec:2.1.1.354, ec:2.1.1.357, ec:2.1.1.369, ec:2.1.1.370, ec:2.1.1.371, ec:2.3.1.48, ec:2.3.2.27, ec:2.7.11.22, ec:2.7.11.23, ec:2.7.4.14, ec:2.8.3.13, ec:3.1.3.16, ec:5.6.2.6, ec:6.1.1.6 | KO: K02603, K02606, K04498, K04567, K06062, K06101, K06672, K07117, K08819, K08881, K08882, K08883, K09186, K09187, K09188, K09189, K10276, K10603, K10638, K10728, K10875, K10896,...
eggNOGGOKEGG
eggNOG-inferred
Pa11g0989Pa11g0989.1

…737 | GO:0009744 | GO:0045892 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | mitochondrion | regulation of DNA-templated transcription | response to abscisic acid | response to sucrose | negative regulation of DNA-templated tra…

Show annotation evidence
eggNOG
Preferred name: LOC100382023 | Seed ortholog: 337451.A0A3S3Q5F4 | COG: S | eggNOG OG: B3@131567|A-1*, B3@3193|BDa-24, B3@33090|AIL-20, B3@3398|CID-29, zf-CW@131567|c-5, zf-CW@2759|BY-9, zf-CW@3193|Oq-17, zf-CW@33090|JX-15, zf-CW@3398|Vv-19
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0006355 regulation of DNA-templated transcription; GO:0009737 response to abscisic acid; GO:0009744 response to sucrose; GO:0045892 negative regulation of DNA-templated transcription
KEGG
KO: K09287 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa11g0997Pa11g0997.1

…twork | cytosol | plasma membrane | phospholipid transfer to membrane | lipid transport | transcription factor binding | lipid binding | response to water deprivation | plant-type cell wall | plasmodesma | chloroplast | chloroplast thylakoid | response to salt stress | response to abscisic acid | cu…

Show annotation evidence
eggNOG
Preferred name: NLTP2 | Seed ortholog: 337451.A0A3S3MY60 | COG: S | eggNOG OG: Tryp_alpha_amyl@131567|A-1*, Tryp_alpha_amyl@2759|Iu-12!
GO
GO:0003674 molecular_function; GO:0005516 calmodulin binding; GO:0005576 extracellular region; GO:0005768 endosome; GO:0005794 Golgi apparatus; GO:0005802 trans-Golgi network; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006649 phospholipid transfer to membrane; GO:0006869 lipid transport; GO:0008134 transcription factor binding; GO:0008289 lipid binding; GO:0009414 response to water deprivation; GO:0009505...
eggNOGGO
eggNOG-inferred
Pa11g1000Pa11g1000.1

…twork | cytosol | plasma membrane | phospholipid transfer to membrane | lipid transport | transcription factor binding | lipid binding | response to water deprivation | plant-type cell wall | plasmodesma | chloroplast | chloroplast thylakoid | response to salt stress | response to abscisic acid | cu…

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eggNOG
Preferred name: NLTP2 | Seed ortholog: 337451.A0A443PN67 | COG: S | eggNOG OG: Tryp_alpha_amyl@131567|A-1*, Tryp_alpha_amyl@2759|Iu-12!
GO
GO:0003674 molecular_function; GO:0005516 calmodulin binding; GO:0005576 extracellular region; GO:0005768 endosome; GO:0005794 Golgi apparatus; GO:0005802 trans-Golgi network; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006649 phospholipid transfer to membrane; GO:0006869 lipid transport; GO:0008134 transcription factor binding; GO:0008289 lipid binding; GO:0009414 response to water deprivation; GO:0009505...
eggNOGGO
eggNOG-inferred
Pa11g1043Pa11g1043.1

Pa11g1043 | Pa11g1043.1 | LOC109017848 | 337451.A0A3S3N4N5 | S1@131567|yl-44 | SHS2_Rpb7-N@131567|C-2 | COG0557 | ec:2.1.1.354 | K03015 | 03020 | 03420 | 00001 | 01611 | 03019 | 03021 | 03400 | S1_78_156 | SHS2_Rpb7-N_8_64 | GO:0000288 | GO:0000956 | GO...

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eggNOG
Preferred name: LOC109017848 | Seed ortholog: 337451.A0A3S3N4N5 | COG: COG0557 | eggNOG OG: S1@131567|yl-44, SHS2_Rpb7-N@131567|C-2
GO
GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; GO:0000956 nuclear-transcribed mRNA catabolic process; GO:0003697 single-stranded DNA binding; GO:0003727 single-stranded RNA binding; GO:0003899 DNA-directed RNA polymerase activity; GO:0003968 RNA-directed RNA polymerase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005665 RNA polymerase II, core complex; GO...
KEGG
EC: ec:2.1.1.354 | KO: K03015 | Pathway: 03020, 03420 | BRITE: 00001, 01611, 03019, 03021, 03400
eggNOGGOKEGG
eggNOG-inferred
Pa11g1060Pa11g1060.1

… postsynaptic cytosol | regulation protein catabolic process at postsynapse | DNA-binding transcription factor binding | chromatin-protein adaptor activity | co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway | regulation of protein localization to nucleus | regulation o…

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eggNOG
Preferred name: PIN1 | Seed ortholog: 337451.A0A3S3QZR2 | COG: S | eggNOG OG: Rotamase@2759|B-2!
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000413 protein peptidyl-prolyl isomerization; GO:0000993 RNA polymerase II complex binding; GO:0001666 response to hypoxia; GO:0001934 positive regulation of protein phosphorylation; GO:0003674 molecular_function; GO:0003755 peptidyl-prolyl cis-trans isomerase activity; GO:0003774 cytoskeletal motor activity; GO:0005515 protein binding; GO...
KEGG
EC: ec:5.2.1.8 | KO: K09578 | Pathway: 03250 | BRITE: 00001, 01000, 03021, 03110
eggNOGGOKEGG
eggNOG-inferred
Pa11g1064Pa11g1064.1

…759 | GO:1901348 | GO:1990110 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | sequence-specific DNA binding | xylem vessel member cell differentiation | positive regulation of secondar…

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eggNOG
Preferred name: LOC106774689 | Seed ortholog: 337451.A0A443PNE9 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|om-16, NAM@3398|AmR-21, NAM@35493|AE-6, NAM@58023|AGB-18
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0043565 sequence-specific DNA binding; GO:0048759 xylem vessel member cell differentiation; GO:1901348 positive regulation of secondary cell wall biogenesis; GO:1990110 callus formation
eggNOGGO
eggNOG-inferred
Pa11g1092Pa11g1092.1

…GO:0003700 | GO:0005515 | GO:0005634 | GO:0005737 | GO:0006355 | GO:0010039 | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | regulation of DNA-templated transcription | response to iron ion

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eggNOG
Preferred name: LOC104600134 | Seed ortholog: 337451.A0A443PNI5 | COG: S | eggNOG OG: HLH@131567|Ae-7, HLH@1437183|AGV-17
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0010039 response to iron ion
KEGG
KO: K09074, K09108, K26457 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa11g1151Pa11g1151.1

…565 | GO:0045892 | GO:1901141 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | response to wounding | sequence-specific DNA binding | negative regulation of DNA-templated transcription | regulation of lignin biosynthetic process

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eggNOG
Preferred name: MYB1 | Seed ortholog: 337451.A0A443PNM8 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@3398|UUG-51, Myb_DNA-binding@35493|KPq-43
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009611 response to wounding; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:1901141 regulation of lignin biosynthetic process
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa11g1182Pa11g1182.1

…GO:0006355 | GO:0009648 | GO:0009909 | GO:0009911 | GO:0045893 | GO:2000028 | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | photoperiodism | regulation of flower development | positive regulation of flower development | positive r…

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eggNOG
Preferred name: FD | Seed ortholog: 4432.A0A1U8AJC8 | COG: S | eggNOG OG: bZIP_1@131567|BO-8!, bZIP_1@33090|aZ-18
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009648 photoperiodism; GO:0009909 regulation of flower development; GO:0009911 positive regulation of flower development; GO:0045893 positive regulation of DNA-templated transcription; GO:2000028 regulation of photoperiodism, flowering
KEGG
KO: K14432 | Pathway: 04075 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa11g1185Pa11g1185.1

…tory region sequence-specific DNA binding | DNA binding | chromatin binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | pollen development | anther development | anther morphogenesis | anther wall tapetum cell differentiation …

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eggNOG
Preferred name: AMS | Seed ortholog: 337451.A0A3S3P3A8 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|FXN-30, HLH@33090|AAF-17, HLH@35493|Aps-20, bHLH-MYC_N@131567|A-1*, bHLH-MYC_N@2759|C-2, bHLH-MYC_N@3193|Ad-9, bHLH-MYC_N@33090|s-7
GO
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0048653 anther development; GO:0048654 anther morphogenesis; GO:0048657 anther wall tapetum...
eggNOGGO
eggNOG-inferred

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