Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046
West Indian T2T annotations
3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

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2,385 genes for “transcription factor”

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Pa08g1240Pa08g1240.1

Pa08g1240 | Pa08g1240.1 | LOC103711871 | 4432.A0A1U7YZI1 | C2@131567|F-3 | C2@2759|w-6 | C2@35493|ArB-17 | PRT_C@2759|A-1 | PRT_C@3398|Dn-13 | PRT_C@35493|BY-10 | S | ec:3.1.3.64 | ec:3.1.3.95 | K17631 | K17633 | K17634 | K18081 | K19901 | 00562 | 01100 |...

Show annotation evidence
eggNOG
Preferred name: LOC103711871 | Seed ortholog: 4432.A0A1U7YZI1 | COG: S | eggNOG OG: C2@131567|F-3, C2@2759|w-6, C2@35493|ArB-17, PRT_C@2759|A-1, PRT_C@3398|Dn-13, PRT_C@35493|BY-10
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0002021 response to dietary excess; GO:0003674 molecular_function; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0007165 signal transduction; GO:0007265 Ras protein signal transduction; GO:0007389 pattern specification process; GO:0008150 biological_process; GO:0008285 negative regulation of cell population...
KEGG
EC: ec:3.1.3.64, ec:3.1.3.95 | KO: K17631, K17633, K17634, K18081, K19901 | Pathway: 00562, 01100, 04014, 04070, 04210, 04668 | BRITE: 00001, 01000, 01009
eggNOGGOKEGG
eggNOG-inferred
Pa08g1321Pa08g1321.1

Pa08g1321 | Pa08g1321.1 | Pa08g1321.2 | LOC104598642 | 337451.A0A443PDS5 | PK_Tyr_Ser-Thr@131567|CMc-25 | PK_Tyr_Ser-Thr@3193|YTB-45 | PK_Tyr_Ser-Thr@3398|wav-54 | S | ec:1.11.1.7 | ec:2.7.11.1 | K06272 | K19511 | 03320 | 04360 | 04510 | 05100 | 05213 |...

Show annotation evidence
eggNOG
Preferred name: LOC104598642 | Seed ortholog: 337451.A0A443PDS5 | COG: S | eggNOG OG: PK_Tyr_Ser-Thr@131567|CMc-25, PK_Tyr_Ser-Thr@3193|YTB-45, PK_Tyr_Ser-Thr@3398|wav-54
GO
GO:0000287 magnesium ion binding; GO:0000785 chromatin; GO:0000902 cell morphogenesis; GO:0001558 regulation of cell growth; GO:0001568 blood vessel development; GO:0001658 branching involved in ureteric bud morphogenesis; GO:0001725 stress fiber; GO:0001885 endothelial cell development; GO:0001954 positive regulation of cell-matrix adhesion; GO:0003151 outflow tract morphogenesis; GO:0003211 cardiac ventricle...
KEGG
EC: ec:1.11.1.7, ec:2.7.11.1 | KO: K06272, K19511 | Pathway: 03320, 04360, 04510, 05100, 05213 | BRITE: 00001, 01000, 01001, 03036
eggNOGGOKEGG
eggNOG-inferred
Pa08g1388Pa08g1388.1

…sduction system | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | transcription regulator complex | cytoplasm | cytosol | regulation of DNA-templated transcription | circadian rhythm | response to cold | response to …

Show annotation evidence
eggNOG
Preferred name: LOC103717624 | Seed ortholog: 337451.A0A3S3QPR2 | eggNOG OG: Myb_DNA-binding@131567|Se-18, Myb_DNA-binding@35493|Dwa-36
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000156 phosphorelay response regulator activity; GO:0000160 phosphorelay signal transduction system; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005667 transcription regulator complex; GO:0005737...
KEGG
KO: K11111, K12860, K14491, K17613, K25749 | Pathway: 03040, 04075 | BRITE: 00001, 01009, 03032, 03041, 03400
eggNOGGOKEGG
eggNOG-inferred
Pa08g1401Pa08g1401.1

…1_134 | HMG_box_252_319 | GO:0003700 | GO:0005515 | GO:0005634 | GO:0008150 | DNA-binding transcription factor activity | protein binding | nucleus | biological_process

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eggNOG
Preferred name: HMGB10 | Seed ortholog: 337451.A0A3S3R419 | COG: S | eggNOG OG: ARID@131567|A-1*, ARID@2759|N-4, ARID@33090|Cw-10, HMG_box@131567|Aj-7, HMG_box@2759|Gn-11, HMG_box@3398|AXE-21
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008150 biological_process
KEGG
EC: ec:2.1.1.354 | KO: K22483, K22748 | Pathway: 00310, 01100 | BRITE: 00001, 01000, 03000, 03036
eggNOGGOKEGG
eggNOG-inferred
Pa08g1415Pa08g1415.1

…802 | GO:0045892 | GO:0048364 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | response to auxin | embryonic pattern specification | xylem and phloem pattern formation | identical protein binding | negative regulation of DNA-temp…

Show annotation evidence
eggNOG
Preferred name: LOC110788135 | Seed ortholog: 337451.A0A443P6A0 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|BU-8, AUX_IAA@33090|Fw-11, AUX_IAA@3398|de-17
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009733 response to auxin; GO:0009880 embryonic pattern specification; GO:0010051 xylem and phloem pattern formation; GO:0042802 identical protein binding; GO:0045892 negative regulation of DNA-templated transcription; GO:0048364 root development
KEGG
KO: K14484 | Pathway: 04075 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa08g1417Pa08g1417.1

…GO:0003700 | GO:0005634 | GO:0006355 | GO:0009910 | GO:0042752 | GO:0048579 | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription | negative regulation of flower development | regulation of circadian rhythm | negative regulation of long-day photoperiodism,…

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eggNOG
Preferred name: LOC116214332 | Seed ortholog: 337451.A0A3S3PEL7 | COG: S | eggNOG OG: UNK.EP8F@131567|A-1*, UNK.EP8F@3193|B-2, UNK.EP8F@3398|Am-9
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009910 negative regulation of flower development; GO:0042752 regulation of circadian rhythm; GO:0048579 negative regulation of long-day photoperiodism, flowering
eggNOGGO
eggNOG-inferred
Pa08g1422Pa08g1422.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

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eggNOG
Preferred name: LOC104593297 | Seed ortholog: 337451.A0A3S4NB75 | COG: COG4886 | eggNOG OG: LRR_8@131567|C-2!, LRR_8@1437183|AAu-26, LRR_8@3398|Fa-15, NB-ARC@131567|AC-6, NB-ARC@1437183|EvR-34, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|Ez-9!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K13459, K14497, K16225, K16226 | Pathway: 04016, 04075, 04626 | BRITE: 00001, 01000
eggNOGGOKEGG
eggNOG-inferred
Pa08g1427Pa08g1427.1

Pa08g1427 | Pa08g1427.1 | cnot9 | 337451.A0A3S3NTM1 | Rcd1@2759|A-1 | Rcd1@35493|Ft-15 | S | K12606 | 03018 | 00001 | 03019 | Rcd1_35_293 | GO:0000122 | GO:0000289 | GO:0000932 | GO:0002679 | GO:0005515 | GO:0005634 | GO:0005737 | GO:0005829 | GO:0006352 |...

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eggNOG
Preferred name: cnot9 | Seed ortholog: 337451.A0A3S3NTM1 | COG: S | eggNOG OG: Rcd1@2759|A-1, Rcd1@35493|Ft-15
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening; GO:0000932 P-body; GO:0002679 respiratory burst involved in defense response; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0006352 DNA-templated transcription initiation; GO:0006354 DNA-templated transcription elongation; GO:0006355...
KEGG
KO: K12606 | Pathway: 03018 | BRITE: 00001, 03019
eggNOGGOKEGG
eggNOG-inferred
Pa08g1434Pa08g1434.1

Pa08g1434 | Pa08g1434.1 | LOC107948955 | 210143.A0A1R3GPF3 | IBN_N@131567|A-1* | IBN_N@2759|BD-9 | IBN_N@3193|ANN-24 | IBN_N@93758|DlP-34 | S | K14293 | 03013 | 00001 | 03009 | 03036 | IBN_N_23_103 | GO:0000278 | GO:0003723 | GO:0005085 | GO:0005515 | GO...

Show annotation evidence
eggNOG
Preferred name: LOC107948955 | Seed ortholog: 210143.A0A1R3GPF3 | COG: S | eggNOG OG: IBN_N@131567|A-1*, IBN_N@2759|BD-9, IBN_N@3193|ANN-24, IBN_N@93758|DlP-34
GO
GO:0000278 mitotic cell cycle; GO:0003723 RNA binding; GO:0005085 guanyl-nucleotide exchange factor activity; GO:0005515 protein binding; GO:0005525 GTP binding; GO:0005829 cytosol; GO:0006404 RNA import into nucleus; GO:0006606 protein import into nucleus; GO:0006607 NLS-bearing protein import into nucleus; GO:0006610 ribosomal protein import into nucleus; GO:0006612 protein targeting to membrane; GO:0006656...
KEGG
KO: K14293 | Pathway: 03013 | BRITE: 00001, 03009, 03036
eggNOGGOKEGG
eggNOG-inferred
Pa08g1450Pa08g1450.1

Pa08g1450 | Pa08g1450.1 | Pa08g1450.2 | ABCB9 | 337451.A0A3S3NY80 | ABC_membrane@131567|aH-23 | ABC_membrane@2759|CyF-36 | ABC_membrane@3398|dIX-48 | ABC_membrane@35493|QkW-44 | ABC_tran|0U9VYJ@131567 | S | ec:7.6.2.2 | K05658 | 02010 | 00001 | 01000 |...

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eggNOG
Preferred name: ABCB9 | Seed ortholog: 337451.A0A3S3NY80 | COG: S | eggNOG OG: ABC_membrane@131567|aH-23, ABC_membrane@2759|CyF-36, ABC_membrane@3398|dIX-48, ABC_membrane@35493|QkW-44, ABC_tran|0U9VYJ@131567
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0001654 eye development; GO:0001666 response to hypoxia; GO:0001894 tissue homeostasis; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006473 protein acetylation; GO:0006629 lipid metabolic process; GO:0006631 fatty acid metabolic process; GO:0006699 bile acid biosynthetic process; GO...
KEGG
EC: ec:7.6.2.2 | KO: K05658 | Pathway: 02010 | BRITE: 00001, 01000, 02000, 04090, 04147
eggNOGGOKEGG
eggNOG-inferred
Pa08g1471Pa08g1471.1

…742 | GO:0042542 | GO:0043565 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to oxidative stress | response to salt stress | brassinosteroid mediated signaling pathway | resp…

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eggNOG
Preferred name: BHLH148 | Seed ortholog: 337451.A0A3S3P9Y4 | COG: S | eggNOG OG: UNK.FBJB@131567|A-1*, UNK.FBJB@3398|d-6
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006979 response to oxidative stress; GO:0009651 response to salt stress; GO:0009742 brassinosteroid mediated signaling pathway; GO:0042542 response to hydrogen peroxide; GO:0043565 sequence-specific...
eggNOGGO
eggNOG-inferred
Pa08g1489Pa08g1489.1

Pa08g1489 | Pa08g1489.1 | LOC104613241 | 337451.A0A3S3PCV8 | Cation_ATPase_C@131567|CF-13 | Cation_ATPase_C@1437183|CeC-37 | Cation_ATPase_C@3193|AbH-32 | Cation_ATPase_C@35493|AAv-30 | Cation_ATPase_N@131567|z-7 | Cation_ATPase_N@1437183|FVL-30 | E1-E2...

Show annotation evidence
eggNOG
Preferred name: LOC104613241 | Seed ortholog: 337451.A0A3S3PCV8 | COG: S | eggNOG OG: Cation_ATPase_C@131567|CF-13, Cation_ATPase_C@1437183|CeC-37, Cation_ATPase_C@3193|AbH-32, Cation_ATPase_C@35493|AAv-30, Cation_ATPase_N@131567|z-7, Cation_ATPase_N@1437183|FVL-30, E1-E2_ATPase@131221|KhZ-42, E1-E2_ATPase@131567|Ow-19, E1-E2_ATPase@1437183|RMc-46!, E1-E2_ATPase@35493|Ekd-37, Hydrolase@131567|CFH-26, Hydrolase...
GO
GO:0000139 Golgi membrane; GO:0000902 cell morphogenesis; GO:0001818 negative regulation of cytokine production; GO:0002119 nematode larval development; GO:0003056 regulation of vascular associated smooth muscle contraction; GO:0003407 neural retina development; GO:0005388 P-type calcium transporter activity; GO:0006357 regulation of transcription by RNA polymerase II; GO:0006816 calcium ion transport; GO:0006874...
KEGG
EC: ec:7.2.2.10 | KO: K01537 | Pathway: 04020, 04022, 04024, 04261, 04925, 04961, 04970, 04972, 04978 | BRITE: 00001, 01000
eggNOGGOKEGG
eggNOG-inferred
Pa08g1547Pa08g1547.1

…ing | RNA polymerase II cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity, RNA polymerase II-specific | DNA-binding transcription repressor activity | DNA-binding transcription activator activity, RNA polymerase II-specific | DNA binding | chromatin bind…

Show annotation evidence
eggNOG
Preferred name: LOC110790168 | Seed ortholog: 29760.D7UAH8 | COG: COG2036 | eggNOG OG: CBFD_NFYB_HMF@131567|BS-10, CBFD_NFYB_HMF@2759|GM-15
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000785 chromatin; GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001217 DNA-binding transcription repressor activity; GO:0001228 DNA-binding transcription activator...
KEGG
EC: ec:6.5.1.3 | KO: K08065 | Pathway: 04612, 05152, 05166 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa08g1574Pa08g1574.1

…97 | GO:0090376 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | response to water deprivation | fruit dehiscence | specification of stamen identity | floral meristem determinacy | protein dimerization activity | le…

Show annotation evidence
eggNOG
Preferred name: AG2 | Seed ortholog: 337451.A0A443PEH7 | COG: S | eggNOG OG: K-box@131221|b-5, K-box@131567|A-1*, K-box@2759|O-4, K-box@3398|Mi-13, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|Aqc-25, SRF-TF@35493|jY-20
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0010047 fruit dehiscence; GO:0010097 specification of stamen identity; GO:0010582 floral meristem determinacy; GO:0046983 protein dimerization activity; GO:0048366 leaf development; GO...
KEGG
KO: K09264 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa08g1576Pa08g1576.1

…718 | GO:0015995 | GO:0016607 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | shade avoidance | chloroplast organization | anthocyanin-containing compound biosynthetic process | chloro…

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eggNOG
Preferred name: LOC104608418 | Seed ortholog: 337451.A0A3S3N1D9 | COG: S | eggNOG OG: zf-B_box@2759|B-2!, zf-B_box@33090|l-7, zf-B_box@3398|RD-17, zf-B_box@35493|CE-11
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009641 shade avoidance; GO:0009658 chloroplast organization; GO:0009718 anthocyanin-containing compound biosynthetic process; GO:0015995 chlorophyll biosynthetic process; GO:0016607 nuclear speck
KEGG
KO: K12135 | Pathway: 04712 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa08g1620Pa08g1620.1

…091 | GO:0030154 | GO:0048497 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | plant-type cell wall loosening | trichome branching | cell differentiation | maintenance of floral organ identity

Show annotation evidence
eggNOG
Preferred name: HDG11 | Seed ortholog: 337451.A0A3S4NBX2 | COG: S | eggNOG OG: Homeodomain@131567|Fe-12, Homeodomain@35493|CIj-25, START@131567|e-5, START@2759|CM-9!, START@3398|ABq-20, START@35493|Xd-16
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009828 plant-type cell wall loosening; GO:0010091 trichome branching; GO:0030154 cell differentiation; GO:0048497 maintenance of floral organ identity
KEGG
KO: K09338 | Pathway: 04814 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa08g1642Pa08g1642.1

…ing | RNA polymerase II cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity, RNA polymerase II-specific | DNA-binding transcription repressor activity, RNA polymerase II-specific | DNA-binding transcription activator activity, RNA polymerase II-specific | …

Show annotation evidence
eggNOG
Preferred name: BHLH30 | Seed ortholog: 337451.A0A443P6Y8 | COG: S | eggNOG OG: HLH@131567|OW-12, HLH@3398|BHN-21, HLH@35493|Abn-19
GO
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II...
KEGG
KO: K09092, K22495 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa08g1656Pa08g1656.1

…77 | GO:1902584 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to auxin | auxin metabolic process | vegetative phase change | abaxial cell fate specification | …

Show annotation evidence
eggNOG
Preferred name: LOC104599494 | Seed ortholog: 337451.A0A443P6W1 | COG: S | eggNOG OG: Auxin_resp@131567|A-1*, Auxin_resp@2759|B-2, Auxin_resp@3398|Cm-12, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AHu-20, B3@33090|Id-12, B3@3398|BCh-24
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009733 response to auxin; GO:0009850 auxin metabolic process; GO:0010050 vegetative phase change; GO:0010158 abaxial cell fate specification; GO:0010582 floral meristem...
KEGG
KO: K14486 | Pathway: 04075 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa08g1659Pa08g1659.1

…364 | GO:0048510 | GO:0048573 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | asymmetric cell division | positive regulation of gibberellic acid mediated signaling pathway | regulation…

Show annotation evidence
eggNOG
Preferred name: MGP | Seed ortholog: 4432.A0A1U7ZCF8 | COG: S | eggNOG OG: UNK.IYJ6@131567|A-1*, UNK.IYJ6@3193|y-10, UNK.IYJ6@3398|AW-12, UNK.IYJ6@58023|AH-11
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008356 asymmetric cell division; GO:0009939 positive regulation of gibberellic acid mediated signaling pathway; GO:0010075 regulation of meristem growth; GO:0010150 leaf senescence; GO:0019900 kinase...
KEGG
KO: K25870 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa08g1668Pa08g1668.1

… development | nuclear androgen receptor binding | RNA polymerase II-specific DNA-binding transcription factor binding | DNA polymerase binding | lncRNA binding | histone H4 reader activity | histone H3K14ac reader activity | DNA-binding transcription factor binding | histone reader activity | ATP-d…

Show annotation evidence
eggNOG
Preferred name: GRF7 | Seed ortholog: 337451.A0A3S3PA74 | COG: S | eggNOG OG: QLQ@2759|A-1, QLQ@3193|K-4, QLQ@3398|Bp-10, WRC@131221|EO-13, WRC@131567|A-1*, WRC@33090|e-6, WRC@3398|La-18
GO
GO:0000182 rDNA binding; GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding; GO:0001221 transcription coregulator binding; GO:0001223 transcription coactivator...
KEGG
KO: K11647, K11786 | Pathway: 03082, 04714, 05225 | BRITE: 00001, 03021, 03036
eggNOGGOKEGG
eggNOG-inferred
Pa08g1674Pa08g1674.1

Pa08g1674 | Pa08g1674.1 | UBP10 | 337451.A0A443P6V1 | DUSP@131567|A-1* | DUSP@2759|HO-18 | DUSP@3398|UW-29 | UCH@131567|Hh-17 | UCH@2759|AiQ-26 | UCH@3398|Hhs-38 | S | ec:3.4.19.12 | K11366 | K11834 | K11835 | K11837 | K11838 | K11839 | K11844 | K11848 |...

Show annotation evidence
eggNOG
Preferred name: UBP10 | Seed ortholog: 337451.A0A443P6V1 | COG: S | eggNOG OG: DUSP@131567|A-1*, DUSP@2759|HO-18, DUSP@3398|UW-29, UCH@131567|Hh-17, UCH@2759|AiQ-26, UCH@3398|Hhs-38
GO
GO:0000244 spliceosomal tri-snRNP complex assembly; GO:0001222 transcription corepressor binding; GO:0002181 cytoplasmic translation; GO:0003674 molecular_function; GO:0004197 cysteine-type endopeptidase activity; GO:0004843 cysteine-type deubiquitinase activity; GO:0005160 transforming growth factor beta receptor binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO...
KEGG
EC: ec:3.4.19.12 | KO: K11366, K11834, K11835, K11837, K11838, K11839, K11844, K11848, K11855, K11858, K21343 | Pathway: 03083, 04137, 04144 | BRITE: 00001, 01000, 01002, 03021, 03036, 04121, 04131
eggNOGGOKEGG
eggNOG-inferred
Pa08g1692Pa08g1692.1

…ption cis-regulatory region binding | double-stranded telomeric DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | nucleolus | regulation of transcription by RNA polymerase II | protein-containing complex | protein homodimerization activity | single-stranded telome…

Show annotation evidence
eggNOG
Preferred name: LOC110796294 | Seed ortholog: 337451.A0A3S3N6W6 | COG: S | eggNOG OG: Linker_histone@131221|Cc-10, Linker_histone@131567|C-2!, Linker_histone@3398|MR-15, Myb_DNA-binding@131567|uI-23, Myb_DNA-binding@2759|yX-24, Myb_DNA-binding@3193|CBo-33, Myb_DNA-binding@3398|DHO-35
GO
GO:0000785 chromatin; GO:0000976 transcription cis-regulatory region binding; GO:0003691 double-stranded telomeric DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0006357 regulation of transcription by RNA polymerase II; GO:0032991 protein-containing complex; GO:0042803 protein homodimerization activity; GO:0043047 single...
KEGG
EC: ec:3.4.19.12 | KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa08g1710Pa08g1710.1

…892 | GO:0071470 | GO:1900426 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | calmodulin binding | nucleus | endoplasmic reticulum membrane | plasma membrane | regulation of DNA-templated transcription | membrane | regulation of defense r…

Show annotation evidence
eggNOG
Preferred name: NTL9 | Seed ortholog: 337451.A0A443P702 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@1437183|BPX-23, NAM@3193|bY-14, NAM@3398|AGt-18, NAM@35493|AE-6
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0005789 endoplasmic reticulum membrane; GO:0005886 plasma membrane; GO:0006355 regulation of DNA-templated transcription; GO:0016020 membrane; GO:0031347 regulation of defense response; GO:0045892 negative regulation of DNA...
eggNOGGO
eggNOG-inferred
Pa08g1731Pa08g1731.1

…O:0042631 | GO:0043565 | GO:0045892 | GO:2000037 | GO:2000038 | DNA binding | DNA-binding transcription factor activity | nucleus | DNA-templated transcription | regulation of cell size | response to water deprivation | trichome morphogenesis | negative regulation of cell growth | negative regulatio…

Show annotation evidence
eggNOG
Preferred name: LOC103708474 | Seed ortholog: 337451.A0A3S3N709 | eggNOG OG: Myb_DNA-bind_4@131567|B-2, Myb_DNA-bind_4@3193|FG-12
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006351 DNA-templated transcription; GO:0008361 regulation of cell size; GO:0009414 response to water deprivation; GO:0010090 trichome morphogenesis; GO:0030308 negative regulation of cell growth; GO:0032876 negative regulation of DNA endoreduplication; GO:0042631 cellular response to water deprivation; GO:0043565...
eggNOGGO
eggNOG-inferred
Pa08g1733Pa08g1733.1

…4@3193|IL-13 | Myb_DNA-bind_4_65_151 | GO:0003700 | GO:0005515 | GO:0005634 | DNA-binding transcription factor activity | protein binding | nucleus

Show annotation evidence
eggNOG
Preferred name: GT-2 | Seed ortholog: 337451.A0A3S3NU27 | eggNOG OG: Myb_DNA-bind_4@131567|B-2, Myb_DNA-bind_4@3193|IL-13
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus
eggNOGGO
eggNOG-inferred
Pa08g1734Pa08g1734.1

…4@3193|IL-13 | Myb_DNA-bind_4_65_151 | GO:0003700 | GO:0005515 | GO:0005634 | DNA-binding transcription factor activity | protein binding | nucleus

Show annotation evidence
eggNOG
Preferred name: GT-2 | Seed ortholog: 337451.A0A3S3NU27 | eggNOG OG: Myb_DNA-bind_4@131567|B-2, Myb_DNA-bind_4@3193|IL-13
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus
eggNOGGO
eggNOG-inferred
Pa08g1749Pa08g1749.1

…GO:0010114 | GO:0032922 | GO:0042752 | GO:0043153 | GO:2000024 | GO:2000028 | DNA-binding transcription factor activity | nucleus | circadian rhythm | response to blue light | regulation of photomorphogenesis | response to red light | circadian regulation of gene expression | regulation of circadian…

Show annotation evidence
eggNOG
Preferred name: ASG4 | Seed ortholog: 337451.A0A443P713 | COG: S | eggNOG OG: Myb_DNA-binding@131567|uI-23, Myb_DNA-binding@2759|yY-24, Myb_DNA-binding@33090|INd-41, Myb_DNA-binding@3398|PWh-47
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0007623 circadian rhythm; GO:0009637 response to blue light; GO:0010099 regulation of photomorphogenesis; GO:0010114 response to red light; GO:0032922 circadian regulation of gene expression; GO:0042752 regulation of circadian rhythm; GO:0043153 entrainment of circadian clock by photoperiod; GO:2000024 regulation of leaf development; GO...
KEGG
EC: ec:3.4.21.102 | KO: K03797, K11314, K12133, K12134, K15127 | Pathway: 04712 | BRITE: 00001, 01000, 01002, 03000, 03021, 03036
eggNOGGOKEGG
eggNOG-inferred
Pa08g1761Pa08g1761.1

…001 | GO:0080112 | GO:2000652 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | xylem development | mucilage biosynthetic process | seed coat development | negative regulation of DNA-templated transcription | mucilage extrusion from seed coat | see…

Show annotation evidence
eggNOG
Preferred name: KNAT7 | Seed ortholog: 337451.A0A3S3MMY5 | COG: S | eggNOG OG: Homeobox_KN@131567|A-1*, Homeobox_KN@2759|B-2, Homeobox_KN@3193|Bz-10, KNOX1@131567|A-1*, KNOX1@33090|C-2, KNOX1@3398|p-7, KNOX2@131567|A-1*, KNOX2@3193|L-4, KNOX2@35493|C-2
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0010089 xylem development; GO:0010192 mucilage biosynthetic process; GO:0010214 seed coat development; GO:0045892 negative regulation of DNA-templated transcription; GO:0080001 mucilage extrusion from seed coat; GO:0080112 seed growth; GO:2000652 regulation of secondary cell wall...
eggNOGGO
eggNOG-inferred
Pa08g1763Pa08g1763.1

…_224_371 | GRAS_412_565 | GO:0003700 | GO:0005634 | GO:0005737 | GO:0006355 | DNA-binding transcription factor activity | nucleus | cytoplasm | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: SCL8 | Seed ortholog: 337451.A0A3S3NFG0 | eggNOG OG: GRAS@131567|n-8, GRAS@3193|AY-10, GRAS@3398|BI-11
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription
KEGG
KO: K27748 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa08g1772Pa08g1772.1

… | HLH@35493|AbE-19 | S | HLH_83_150 | GO:0003700 | GO:0005634 | GO:0006355 | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: BHLH36 | Seed ortholog: 337451.A0A443P733 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|Apu-20, HLH@33090|AAF-17, HLH@3398|CXq-25, HLH@35493|AbE-19
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred

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