Functional Annotation Search

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Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046: West Indian T2T annotations
3+: indexed evidence types

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2,385 genes for “transcription factor”

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Select	Gene	Matched annotation	Evidence	Actions
Select Pa07g0639	Pa07g0639`Pa07g0639.1`	…\| 03000 \| B3_368_467 \| zf-CW_633_675 \| GO:0003700 \| GO:0005634 \| GO:0048366 \| DNA-binding transcription factor activity \| nucleus \| leaf development Show annotation evidence eggNOG Preferred name: LOC101754811 \| Seed ortholog: 337451.A0A443P116 \| COG: S \| eggNOG OG: B3@131567\|A-1*, B3@3193\|BDZ-24, B3@33090\|AIL-20, zf-CW@131567\|c-5, zf-CW@2759\|BY-9, zf-CW@3193\|Op-17, zf-CW@33090\|JX-15 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0048366 leaf development KEGG KO: K09287 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g0958	Pa07g0958`Pa07g0958.1`	… HLH_43_85 \| GO:0003700 \| GO:0005634 \| GO:0006355 \| GO:0043565 \| GO:0048658 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| sequence-specific DNA binding \| anther wall tapetum development Show annotation evidence eggNOG Preferred name: TorBHLH78 \| Seed ortholog: 3988.B9RXW8 \| COG: S \| eggNOG OG: HLH@131567\|Zg-14!, HLH@1437183\|GTl-31, HLH@3193\|FXO-30, HLH@33090\|AAF-17, HLH@35493\|Aps-20 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0043565 sequence-specific DNA binding; GO:0048658 anther wall tapetum development	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa07g0973	Pa07g0973`Pa07g0973.1`	…317 \| GO:0048653 \| GO:0080060 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| pollen development \| response to jasmonic acid \| regulation of embryonic development \| seed morphogenesis \| anther development \| integument development Show annotation evidence eggNOG Preferred name: LOC103714608 \| Seed ortholog: 337451.A0A3S4PHW8 \| COG: S \| eggNOG OG: NAM@131567\|A-1*, NAM@3193\|AFw-18, NAM@3398\|CyA-28, NAM@35493\|AE-6 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009555 pollen development; GO:0009753 response to jasmonic acid; GO:0045995 regulation of embryonic development; GO:0048317 seed morphogenesis; GO:0048653 anther development; GO:0080060 integument development	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa07g0975	Pa07g0975`Pa07g0975.1`	…893 \| GO:1900055 \| GO:1990841 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to water deprivation \| response to abscisic acid \| jasmonic acid mediated signaling pathway \| seq… Show annotation evidence eggNOG Preferred name: NAC072 \| Seed ortholog: 337451.A0A443P151 \| COG: S \| eggNOG OG: NAM@131567\|A-1*, NAM@3193\|APm-19, NAM@35493\|AE-6 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009737 response to abscisic acid; GO:0009867 jasmonic acid mediated signaling pathway; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1003	Pa07g1003`Pa07g1003.1`	…GO:0009908 \| GO:0009943 \| GO:0009947 \| GO:0010482 \| GO:0010865 \| GO:0099402 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| flower development \| adaxial/abaxial axis specification \| centrolateral axis specification \| regulation of epidermal cell division \| stipule developme… Show annotation evidence eggNOG Preferred name: WOX3 \| Seed ortholog: 337451.A0A3S3NQH5 \| COG: S \| eggNOG OG: Homeodomain@131567\|RH-16, Homeodomain@2759\|XV-17!, Homeodomain@33090\|BEn-23, Homeodomain@3398\|ByB-25 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009908 flower development; GO:0009943 adaxial/abaxial axis specification; GO:0009947 centrolateral axis specification; GO:0010482 regulation of epidermal cell division; GO:0010865 stipule development; GO:0099402 plant organ development KEGG KO: K09299, K09357, K09378, K09379, K09380, K23560 \| Pathway: 04550, 05202, 05206, 05215 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1023	Pa07g1023`Pa07g1023.1`	Pa07g1023 \| Pa07g1023.1 \| Pa07g1023.2 \| LOC100808239 \| 13333.W1NVZ2 \| 337451.A0A3S3NWH5 \| AAA@131567\|Afu-19 \| AAA@2759\|NSR-33 \| AAA_lid_3@131567\|DL-10 \| AAA_lid_3@2759\|Xn-16 \| AAA_lid_3@3193\|NaB-40 \| AAA_lid_3@33090\|Eyw-31 \| S \| ec:1.3.5.1 \| K03061 \| 03050 ... Show annotation evidence eggNOG Preferred name: LOC100808239 \| Seed ortholog: 13333.W1NVZ2, 337451.A0A3S3NWH5 \| COG: S \| eggNOG OG: AAA@131567\|Afu-19, AAA@2759\|NSR-33, AAA_lid_3@131567\|DL-10, AAA_lid_3@2759\|Xn-16, AAA_lid_3@3193\|NaB-40, AAA_lid_3@33090\|Eyw-31 GO GO:0000502 proteasome complex; GO:0004175 endopeptidase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006511 ubiquitin-dependent protein catabolic process; GO:0008540 proteasome regulatory particle, base subcomplex; GO:0016887 ATP hydrolysis activity; GO:0017025 TBP-class protein binding; GO:0031625 ubiquitin protein ligase binding; GO:0036402 proteasome-activating activity; GO:0140296 general... KEGG EC: ec:1.3.5.1 \| KO: K03061 \| Pathway: 03050 \| Module: M00009, M00011, M00148 \| BRITE: 00001, 03051	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1087	Pa07g1087`Pa07g1087.1`	…GO:0043565 \| GO:0045792 \| GO:0045893 \| GO:0048281 \| GO:1901002 \| GO:1902584 \| DNA-binding transcription factor activity \| nucleus \| leaf morphogenesis \| sequence-specific DNA binding \| negative regulation of cell size \| positive regulation of DNA-templated transcription \| inflorescence morphogenesis… Show annotation evidence eggNOG Preferred name: ANAC094 \| Seed ortholog: 337451.A0A3S3NQL6 \| COG: S \| eggNOG OG: NAM@131567\|A-1*, NAM@3193\|ob-16, NAM@3398\|wm-17, NAM@35493\|AE-6 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009965 leaf morphogenesis; GO:0043565 sequence-specific DNA binding; GO:0045792 negative regulation of cell size; GO:0045893 positive regulation of DNA-templated transcription; GO:0048281 inflorescence morphogenesis; GO:1901002 positive regulation of response to salt stress; GO:1902584 positive regulation of response to water deprivation	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1113	Pa07g1113`Pa07g1113.1`	…latory region binding \| cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| response to nitrate \| nitrate assimilation \| response to nitrate starvation \| energy homeostasis Show annotation evidence eggNOG Preferred name: NLP1 \| Seed ortholog: 337451.A0A443P1A2 \| COG: S \| eggNOG OG: PB1@131567\|A-1*, PB1@1437183\|AjO-26, PB1@2759\|Al-8!, PB1@3193\|sP-22, RWP-RK@131567\|Fy-13, RWP-RK@33090\|af-25 GO GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010167 response to nitrate; GO:0042128 nitrate assimilation; GO:0090548 response to nitrate starvation; GO:0097009 energy homeostasis KEGG KO: K13422 \| Pathway: 04016, 04075 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1121	Pa07g1121`Pa07g1121.1`	… II \| chromatin \| cell fate specification \| DNA binding \| chromatin binding \| DNA-binding transcription factor activity \| nucleus \| cytoplasm \| cytosol \| chromatin remodeling \| segment specification \| biological_process \| negative regulation of antimicrobial humoral response \| gonad development \| Wn… Show annotation evidence eggNOG Preferred name: LOC107792657 \| Seed ortholog: 337451.A0A3S3NBX4 \| COG: S \| eggNOG OG: HMG_box@131567\|Aj-7, HMG_box@2759\|Ii-12!, HMG_box@3193\|AhF-22, HMG_box@33090\|AHp-20, HMG_box@3398\|Bxc-26 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000785 chromatin; GO:0001708 cell fate specification; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0006338 chromatin remodeling; GO:0007379 segment specification; GO:0008150 biological_process; GO:0008348 negative... KEGG EC: ec:2.1.1.354 \| KO: K25507 \| Pathway: 00310, 01100, 03410, 04140, 04217, 04613 \| BRITE: 00001, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1144	Pa07g1144`Pa07g1144.1`	… UNK.LDR6@3398\|G-3! \| S \| GO:0003700 \| GO:0005634 \| GO:0006355 \| GO:0008150 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| biological_process Show annotation evidence eggNOG Preferred name: RAD \| Seed ortholog: 337451.A0A3S3NBZ1 \| COG: S \| eggNOG OG: UNK.LDR6@131567\|A-1*, UNK.LDR6@3398\|G-3! GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008150 biological_process	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1164	Pa07g1164`Pa07g1164.1`	…binding \| cis-regulatory region sequence-specific DNA binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| regulation of DNA-templated transcription \| circadian rhythm \| response to heat \| response to cold \| response to blue light \| auxin-activa… Show annotation evidence eggNOG Preferred name: LOC108988117 \| Seed ortholog: 337451.A0A443P1C5 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|uI-23, Myb_DNA-binding@2759\|yY-24, Myb_DNA-binding@58023\|Lhv-44 GO GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0009408 response to heat; GO:0009409 response to cold; GO... KEGG EC: ec:3.4.21.102 \| KO: K03797, K11314, K12133, K12134, K15127 \| Pathway: 04712 \| BRITE: 00001, 01000, 01002, 03000, 03021, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1173	Pa07g1173`Pa07g1173.1`	…638 \| GO:0045893 \| GO:1900056 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| signal transduction \| circadian rhythm \| chloroplast organization \| negative regulation of flower development \| regulation of chlorophyll … Show annotation evidence eggNOG Preferred name: MYBR14 \| Seed ortholog: 337451.A0A443P1D4 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|dl-20, Myb_DNA-binding@1437183\|CtC-35, Myb_DNA-binding@2759\|pK-22, Myb_DNA-binding@3193\|BFB-31, Myb_DNA-binding@33090\|Adt-29, Myb_DNA-binding@58023\|CQy-34 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0007165 signal transduction; GO:0007623 circadian rhythm; GO:0009658 chloroplast organization; GO:0009910 negative regulation of flower development; GO:0010380 regulation of chlorophyll biosynthetic process; GO:0010638 positive...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1175	Pa07g1175`Pa07g1175.1`	…565 \| GO:0045893 \| GO:0048364 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| asymmetric cell division \| sequence-specific DNA binding \| positive regulation of DNA-templated transcript… Show annotation evidence eggNOG Preferred name: LOC104606980 \| Seed ortholog: 337451.A0A3S3QHU1 \| COG: S \| eggNOG OG: zf-C2H2@131567\|qO-18, zf-C2H2@2759\|AFG-19, zf-C2H2@3193\|IJs-30, zf-C2H2@58023\|JjW-31 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008356 asymmetric cell division; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0048364 root development KEGG KO: K25870 \| Pathway: 04391, 05168 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1180	Pa07g1180`Pa07g1180.1`	…GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0006417 \| GO:0009733 \| GO:0042802 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of translation \| response to auxin \| identical protein binding Show annotation evidence eggNOG Preferred name: LOC104604483 \| Seed ortholog: 337451.A0A3S3MRC8 \| COG: S \| eggNOG OG: AUX_IAA@131567\|A-1*, AUX_IAA@2759\|F-3, AUX_IAA@3398\|Bs-9 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006417 regulation of translation; GO:0009733 response to auxin; GO:0042802 identical protein binding KEGG KO: K14484 \| Pathway: 04075 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1203	Pa07g1203`Pa07g1203.1`	…733 \| GO:0009908 \| GO:0010154 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to auxin \| flower development \| fruit development Show annotation evidence eggNOG Preferred name: ARF12 \| Seed ortholog: 337451.A0A443P1L2 \| COG: S \| eggNOG OG: AUX_IAA@131567\|A-1, AUX_IAA@2759\|AW-7, AUX_IAA@3193\|xW-20, AUX_IAA@3398\|Aet-24, Auxin_resp@131221\|y-7, Auxin_resp@131567\|A-1, Auxin_resp@2759\|O-4, Auxin_resp@3193\|Aa-8, Auxin_resp@3398\|Ch-11, B3@131221\|yd-19, B3@131567\|A-1*, B3@3193\|AqU-23, B3@33090\|Id-12, B3@3398\|BOY-25 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009733 response to auxin; GO:0009908 flower development; GO:0010154 fruit development KEGG KO: K14486 \| Pathway: 04075 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1229	Pa07g1229`Pa07g1229.1`	…sis I \| gamete generation \| germ cell development \| spermatogenesis \| brain development \| transcription factor binding \| poly(A) binding \| biological_process \| eukaryotic initiation factor 4E binding \| gonad development \| JUN kinase binding \| extrinsic apoptotic signaling pathway via death domain re… Show annotation evidence eggNOG Preferred name: RH52 \| Seed ortholog: 337451.A0A3S3NXL8 \| COG: S \| eggNOG OG: DEAD@131567\|Fpr-34, DEAD@2759\|PnN-44, DEAD@35493\|ADZt-58, Helicase_C\|82CO8R@131567, Helicase_C\|82CO8R@58023 GO GO:0000390 spliceosomal complex disassembly; GO:0002151 G-quadruplex RNA binding; GO:0002183 cytoplasmic translational initiation; GO:0002753 cytoplasmic pattern recognition receptor signaling pathway; GO:0003677 DNA binding; GO:0003678 DNA helicase activity; GO:0003723 RNA binding; GO:0003724 RNA helicase activity; GO:0003727 single-stranded RNA binding; GO:0003729 mRNA binding; GO:0003743 translation initiation... KEGG EC: ec:5.6.2.7 \| KO: K11594 \| Pathway: 03040, 04622, 05161, 05203 \| BRITE: 00001, 01000, 03019, 03036, 03041	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1234	Pa07g1234`Pa07g1234.1`	…ing \| RNA polymerase II cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription factor activity, RNA polymerase II-specific \| DNA-binding transcription repressor activity, RNA polymerase II-specific \| DNA binding \| chromatin binding \| DNA-binding transcription factor activity… Show annotation evidence eggNOG Preferred name: ILR3 \| Seed ortholog: 337451.A0A443P1I6 \| COG: S \| eggNOG OG: HLH@131567\|BWE-22, HLH@3398\|Izc-33 GO GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding... KEGG KO: K09114, K09115 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1259	Pa07g1259`Pa07g1259.1`	…001 \| GO:1901371 \| GO:1905615 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to water deprivation \| response to salt stress \| response to gibberellin \| response to salicylic … Show annotation evidence eggNOG Preferred name: DIVARICATA \| Seed ortholog: 337451.A0A3S3MR98 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|uC-23, Myb_DNA-binding@33090\|ItR-42, Myb_DNA-binding@58023\|NbR-46 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009651 response to salt stress; GO:0009739 response to gibberellin; GO:0009751 response to salicylic acid; GO:0009787 regulation of abscisic acid-activated... KEGG KO: K22560, K23406, K24536 \| Pathway: 03082 \| BRITE: 00001, 03036, 04121	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1301	Pa07g1301`Pa07g1301.1`	Pa07g1301 \| Pa07g1301.1 \| ABCF4 \| 337451.A0A3S3QI02 \| ABC_tran\|1G1DB8@131567 \| ABC_tran\|1G1DB8@2759 \| K06184 \| 00001 \| 03012 \| ABC_tran_179_343 \| ABC_tran_507_642 \| GO:0005524 \| GO:0005829 \| GO:0005886 \| GO:0006448 \| GO:0010608 \| GO:0031288 \| GO:0042626 \|... Show annotation evidence eggNOG Preferred name: ABCF4 \| Seed ortholog: 337451.A0A3S3QI02 \| eggNOG OG: ABC_tran\|1G1DB8@131567, ABC_tran\|1G1DB8@2759 GO GO:0005524 ATP binding; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006448 regulation of translational elongation; GO:0010608 post-transcriptional regulation of gene expression; GO:0031288 sorocarp morphogenesis; GO:0042626 ATPase-coupled transmembrane transporter activity; GO:1903013 response to differentiation-inducing factor 1 KEGG KO: K06184 \| BRITE: 00001, 03012	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1303	Pa07g1303`Pa07g1303.1`	…F-TF_10_56 \| GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0010228 \| GO:0048364 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| vegetative to reproductive phase transition of meristem \| root development Show annotation evidence eggNOG Preferred name: AGL12 \| Seed ortholog: 337451.A0A3S3MY59 \| COG: S \| eggNOG OG: K-box@131567\|A-1, K-box@1437183\|Bb-8, K-box@2759\|v-6, SRF-TF@131567\|A-1, SRF-TF@2759\|C-2!, SRF-TF@3193\|so-21, SRF-TF@3398\|APQ-23, SRF-TF@35493\|bP-19 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0010228 vegetative to reproductive phase transition of meristem; GO:0048364 root development KEGG KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 \| Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 \| BRITE: 00001, 03000, 03021, 04131	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1319	Pa07g1319`Pa07g1319.1`	…001 \| 03000 \| AP2_11_60 \| GO:0003700 \| GO:0005634 \| GO:0060862 \| GO:2000280 \| DNA-binding transcription factor activity \| nucleus \| negative regulation of floral organ abscission \| regulation of root development Show annotation evidence eggNOG Preferred name: ERF021 \| Seed ortholog: 337451.A0A3S3MJ60 \| COG: S \| eggNOG OG: AP2@131567\|DU-11, AP2@33090\|KR-15, AP2@58023\|Ww-18 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0060862 negative regulation of floral organ abscission; GO:2000280 regulation of root development KEGG KO: K09286 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1321	Pa07g1321`Pa07g1321.1`	…GO:0003723 \| GO:0005515 \| GO:0005737 \| GO:0006355 \| GO:1900057 \| GO:2000028 \| DNA-binding transcription factor activity \| RNA binding \| protein binding \| cytoplasm \| regulation of DNA-templated transcription \| positive regulation of leaf senescence \| regulation of photoperiodism, flowering Show annotation evidence eggNOG Preferred name: LOC101771527 \| Seed ortholog: 337451.A0A443P1U0 \| COG: COG1094 \| eggNOG OG: KH_1@131567\|B-2, KH_1@2759\|AR-7, KH_1@3398\|iC-17, KH_1@35493\|Lh-13 GO GO:0003700 DNA-binding transcription factor activity; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:1900057 positive regulation of leaf senescence; GO:2000028 regulation of photoperiodism, flowering KEGG KO: K13210 \| BRITE: 00001, 03019, 03041	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1329	Pa07g1329`Pa07g1329.1`	…032 \| GO:1900033 \| GO:2000039 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| mitochondrion \| regulation of DNA-templated transcription \| trichome differentiation \| positive regulation of trichoblast fate specification \| trichom… Show annotation evidence eggNOG Preferred name: LOC103719483 \| Seed ortholog: 337451.A0A3S3MRD1 \| eggNOG OG: Myb_DNA-binding@131567\|Se-18, Myb_DNA-binding@35493\|Ajp-29 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0006355 regulation of DNA-templated transcription; GO:0010026 trichome differentiation; GO:0010063 positive regulation of trichoblast fate specification; GO:0010091 trichome branching; GO:0010154 fruit development; GO:0010228... KEGG KO: K09422 \| Pathway: 03040, 04075 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1330	Pa07g1330`Pa07g1330.1`	…032 \| GO:1900033 \| GO:2000039 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| mitochondrion \| regulation of DNA-templated transcription \| trichome differentiation \| positive regulation of trichoblast fate specification \| trichom… Show annotation evidence eggNOG Preferred name: LOC103719483 \| Seed ortholog: 337451.A0A443P1S7 \| eggNOG OG: Myb_DNA-binding@131567\|Se-18, Myb_DNA-binding@35493\|Ajp-29 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0006355 regulation of DNA-templated transcription; GO:0010026 trichome differentiation; GO:0010063 positive regulation of trichoblast fate specification; GO:0010091 trichome branching; GO:0010154 fruit development; GO:0010228... KEGG KO: K09422 \| Pathway: 03040, 04075 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1331	Pa07g1331`Pa07g1331.1`	…032 \| GO:1900033 \| GO:2000039 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| mitochondrion \| regulation of DNA-templated transcription \| trichome differentiation \| positive regulation of trichoblast fate specification \| trichom… Show annotation evidence eggNOG Preferred name: LOC103719483 \| Seed ortholog: 337451.A0A443P1S7 \| eggNOG OG: Myb_DNA-binding@131567\|Se-18, Myb_DNA-binding@35493\|Ajp-29 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0006355 regulation of DNA-templated transcription; GO:0010026 trichome differentiation; GO:0010063 positive regulation of trichoblast fate specification; GO:0010091 trichome branching; GO:0010154 fruit development; GO:0010228... KEGG KO: K09422 \| Pathway: 03040, 04075 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1340	Pa07g1340`Pa07g1340.1`	…GO:0005515 \| GO:0005634 \| GO:0006355 \| GO:0010629 \| GO:0031347 \| GO:2000022 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| negative regulation of gene expression \| regulation of defense response \| regulation of jasmonic acid medi… Show annotation evidence eggNOG Preferred name: BHLH3 \| Seed ortholog: 4432.A0A1U7ZH69 \| COG: S \| eggNOG OG: HLH@131567\|Zg-14!, HLH@3193\|EiP-29, HLH@33090\|AAF-17, HLH@3398\|HWL-32, HLH@35493\|Aps-20, bHLH-MYC_N@131567\|A-1*, bHLH-MYC_N@2759\|C-2, bHLH-MYC_N@3193\|AFV-24, bHLH-MYC_N@33090\|Y-5, bHLH-MYC_N@3398\|AMO-26 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010629 negative regulation of gene expression; GO:0031347 regulation of defense response; GO:2000022 regulation of jasmonic acid mediated signaling pathway KEGG KO: K13422 \| Pathway: 04016, 04075 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1341	Pa07g1341`Pa07g1341.1`	…GO:0005634 \| GO:0009834 \| GO:0010628 \| GO:0043565 \| GO:0045893 \| GO:0048829 \| DNA-binding transcription factor activity \| nucleus \| plant-type secondary cell wall biogenesis \| positive regulation of gene expression \| sequence-specific DNA binding \| positive regulation of DNA-templated transcription … Show annotation evidence eggNOG Preferred name: LOC110791988 \| Seed ortholog: 337451.A0A3S4P283 \| COG: S \| eggNOG OG: NAM@131567\|A-1*, NAM@3193\|om-16, NAM@3398\|AbE-20, NAM@35493\|AE-6, NAM@58023\|AGC-18 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009834 plant-type secondary cell wall biogenesis; GO:0010628 positive regulation of gene expression; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0048829 root cap development	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1361	Pa07g1361`Pa07g1361.1`	Pa07g1361 \| Pa07g1361.1 \| LOC102722563 \| 77586.A0A0D9VP28 \| OB_Dis3@131567\|C-2 \| OB_Dis3@2759\|Bo-9 \| PIN_4@131567\|CT-9 \| RNB@131567\|B-2 \| RNB@2759\|gW-22 \| Rrp44_CSD1@131567\|A-1* \| Rrp44_CSD1@2759\|e-6 \| Rrp44_S1@131567\|A-1* \| Rrp44_S1@2759\|C-2 \| COG0557 \|... Show annotation evidence eggNOG Preferred name: LOC102722563 \| Seed ortholog: 77586.A0A0D9VP28 \| COG: COG0557 \| eggNOG OG: OB_Dis3@131567\|C-2, OB_Dis3@2759\|Bo-9, PIN_4@131567\|CT-9, RNB@131567\|B-2, RNB@2759\|gW-22, Rrp44_CSD1@131567\|A-1, Rrp44_CSD1@2759\|e-6, Rrp44_S1@131567\|A-1, Rrp44_S1@2759\|C-2 GO GO:0000049 tRNA binding; GO:0000175 3'-5'-RNA exonuclease activity; GO:0000278 mitotic cell cycle; GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; GO:0000465 exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000467 exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic... KEGG KO: K12585 \| Pathway: 03018 \| BRITE: 00001, 03019	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1382	Pa07g1382`Pa07g1382.1`	…0001 \| 01000 \| Myb_DNA-bind_4_26_106 \| GO:0003700 \| GO:0005634 \| GO:0006355 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: LOC104608109 \| Seed ortholog: 337451.A0A443P4P4 \| COG: S \| eggNOG OG: Myb_DNA-bind_4@131567\|v-6, Myb_DNA-bind_4@2759\|AN-7, Myb_DNA-bind_4@3193\|sM-18, Myb_DNA-bind_4@35493\|NK-14, Myb_DNA-bind_4@58023\|AOc-20 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription KEGG EC: ec:2.7.7.1, ec:2.7.7.18 \| KO: K06210 \| Pathway: 00760, 01100, 01240 \| Module: M00115, M00912 \| BRITE: 00001, 01000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g1383	Pa07g1383`Pa07g1383.1`	…0001 \| 01000 \| Myb_DNA-bind_4_26_106 \| GO:0003700 \| GO:0005634 \| GO:0006355 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: LOC104608109 \| Seed ortholog: 337451.A0A443P4P4 \| COG: S \| eggNOG OG: Myb_DNA-bind_4@131567\|v-6, Myb_DNA-bind_4@2759\|AN-7, Myb_DNA-bind_4@3193\|sM-18, Myb_DNA-bind_4@35493\|NK-14, Myb_DNA-bind_4@58023\|AOc-20 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription KEGG EC: ec:2.7.7.1, ec:2.7.7.18 \| KO: K06210 \| Pathway: 00760, 01100, 01240 \| Module: M00115, M00912 \| BRITE: 00001, 01000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace

Functional Annotation Search

2,385 genes for “transcription factor”

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